RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 ZFYP08048 801 aaPredicted RBP18.59■□□□□ 0.57
CCM2-215ENST00000482714 TTC22Q5TAA0 569 aa18.59■□□□□ 0.57
CCM2-215ENST00000482714 TSHZ3Q63HK5 1081 aa18.59■□□□□ 0.57
CCM2-215ENST00000482714 KIAA0825Q8IV33 1275 aa18.59■□□□□ 0.57
CCM2-215ENST00000482714 CNTROBQ8N137 903 aa18.59■□□□□ 0.57
CCM2-215ENST00000482714 MTMR14Q8NCE2 650 aa18.59■□□□□ 0.57
CCM2-215ENST00000482714 ANTXR1Q9H6X2 564 aa18.59■□□□□ 0.57
CCM2-215ENST00000482714 RAI14Q9P0K7 980 aa18.59■□□□□ 0.57
CCM2-215ENST00000482714 COL1A1P02452 1464 aaPredicted RBP18.59■□□□□ 0.57
CCM2-215ENST00000482714 PRDX5P30044 214 aa18.58■□□□□ 0.57
CCM2-215ENST00000482714 SCNN1DP51172 638 aa18.58■□□□□ 0.57
CCM2-215ENST00000482714 NSUN4Q96CB9 384 aaKnown RBP18.58■□□□□ 0.57
CCM2-215ENST00000482714 MXD3Q9BW11 206 aa18.58■□□□□ 0.57
CCM2-215ENST00000482714 PIH1D3Q9NQM4 214 aaKnown RBP18.58■□□□□ 0.57
CCM2-215ENST00000482714 VEGFAP15692 232 aaPredicted RBP18.58■□□□□ 0.56
CCM2-215ENST00000482714 UBE3CQ15386 1083 aa18.58■□□□□ 0.56
CCM2-215ENST00000482714 DZIP1Q86YF9 867 aaKnown RBP18.58■□□□□ 0.56
CCM2-215ENST00000482714 CERS3Q8IU89 383 aa18.58■□□□□ 0.56
CCM2-215ENST00000482714 HACL1Q9UJ83 578 aa18.58■□□□□ 0.56
CCM2-215ENST00000482714 TRIM6-TRIM34B2RNG4 842 aa18.57■□□□□ 0.56
CCM2-215ENST00000482714 IDH1O75874 414 aaKnown RBP18.57■□□□□ 0.56
CCM2-215ENST00000482714 MAP4K4O95819 1239 aaPredicted RBP18.57■□□□□ 0.56
CCM2-215ENST00000482714 BMP2KLQ5H9B9 411 aa18.57■□□□□ 0.56
CCM2-215ENST00000482714 TEKT1Q969V4 418 aa18.57■□□□□ 0.56
CCM2-215ENST00000482714 ADARB2Q9NS39 739 aaKnown RBP18.57■□□□□ 0.56
CCM2-215ENST00000482714 NDUFB9Q9Y6M9 179 aa18.57■□□□□ 0.56
CCM2-215ENST00000482714 MYH13Q9UKX3 1938 aa18.57■□□□□ 0.56
CCM2-215ENST00000482714 TIAM2Q8IVF5 1701 aa18.56■□□□□ 0.56
CCM2-215ENST00000482714 RGS3P49796 1198 aa18.56■□□□□ 0.56
CCM2-215ENST00000482714 MECOMQ03112 1051 aa18.56■□□□□ 0.56
CCM2-215ENST00000482714 SLC9C2Q5TAH2 1124 aa18.56■□□□□ 0.56
CCM2-215ENST00000482714 NAA16Q6N069 864 aaPredicted RBP18.56■□□□□ 0.56
CCM2-215ENST00000482714 PNMA8AQ86V59 439 aaPredicted RBP18.56■□□□□ 0.56
CCM2-215ENST00000482714 MICALL2Q8IY33 904 aa18.56■□□□□ 0.56
CCM2-215ENST00000482714 ZDHHC15Q96MV8 337 aa18.56■□□□□ 0.56
CCM2-215ENST00000482714 MYOZ2Q9NPC6 264 aa18.56■□□□□ 0.56
CCM2-215ENST00000482714 HIP1O00291 1037 aa18.55■□□□□ 0.56
CCM2-215ENST00000482714 GRIK5Q16478 980 aa18.55■□□□□ 0.56
CCM2-215ENST00000482714 USP50Q70EL3 339 aaPredicted RBP18.55■□□□□ 0.56
CCM2-215ENST00000482714 EDC3Q96F86 508 aaKnown RBP18.55■□□□□ 0.56
CCM2-215ENST00000482714 F8W031 263 aaPredicted RBP18.54■□□□□ 0.56
CCM2-215ENST00000482714 BAG3O95817 575 aa18.54■□□□□ 0.56
CCM2-215ENST00000482714 ADD2P35612 726 aa18.54■□□□□ 0.56
CCM2-215ENST00000482714 EPS15P42566 896 aa18.54■□□□□ 0.56
CCM2-215ENST00000482714 CRKP46108 304 aa18.54■□□□□ 0.56
CCM2-215ENST00000482714 PPP4CP60510 307 aa18.54■□□□□ 0.56
CCM2-215ENST00000482714 DLGAP5Q15398 846 aa18.54■□□□□ 0.56
CCM2-215ENST00000482714 RILPL2Q969X0 211 aa18.54■□□□□ 0.56
CCM2-215ENST00000482714 GPR75-ASB3A0A0A6YYF3 556 aa18.53■□□□□ 0.56
CCM2-215ENST00000482714 POTECB2RU33 542 aa18.53■□□□□ 0.56
CCM2-215ENST00000482714 RNF113AO15541 343 aaKnown RBP18.53■□□□□ 0.56
CCM2-215ENST00000482714 GSPT1P15170 499 aaKnown RBP18.53■□□□□ 0.56
CCM2-215ENST00000482714 SDSP20132 328 aa18.53■□□□□ 0.56
CCM2-215ENST00000482714 CFAP100Q494V2 611 aa18.53■□□□□ 0.56
CCM2-215ENST00000482714 MAGEB6Q8N7X4 407 aa18.53■□□□□ 0.56
CCM2-215ENST00000482714 ZC3H15Q8WU90 426 aaKnown RBP18.53■□□□□ 0.56
CCM2-215ENST00000482714 FSD1Q9BTV5 496 aa18.53■□□□□ 0.56
CCM2-215ENST00000482714 GAKO14976 1311 aa18.53■□□□□ 0.56
CCM2-215ENST00000482714 RFX7Q2KHR2 1363 aa18.53■□□□□ 0.56
CCM2-215ENST00000482714 PDE6AP16499 860 aa18.52■□□□□ 0.56
CCM2-215ENST00000482714 EPHX2P34913 555 aa18.52■□□□□ 0.56
CCM2-215ENST00000482714 ZBED3Q96IU2 234 aaPredicted RBP18.52■□□□□ 0.56
CCM2-215ENST00000482714 TAF1DQ9H5J8 278 aaPredicted RBP18.52■□□□□ 0.56
CCM2-215ENST00000482714 MROH7-TTC4A0A0A0MT08 1334 aa18.52■□□□□ 0.55
CCM2-215ENST00000482714 ZNF646O15015 1829 aaPredicted RBP18.52■□□□□ 0.55
CCM2-215ENST00000482714 MYO1BO43795 1136 aa18.52■□□□□ 0.55
CCM2-215ENST00000482714 PLCG2P16885 1265 aa18.52■□□□□ 0.55
CCM2-215ENST00000482714 CYP7A1P22680 504 aa18.52■□□□□ 0.55
CCM2-215ENST00000482714 SCN4AP35499 1836 aa18.52■□□□□ 0.55
CCM2-215ENST00000482714 RBM5P52756 815 aaKnown RBP eCLIP18.52■□□□□ 0.55
CCM2-215ENST00000482714 ZNF384Q8TF68 577 aa18.52■□□□□ 0.55
CCM2-215ENST00000482714 WDR90Q96KV7 1748 aa18.52■□□□□ 0.55
CCM2-215ENST00000482714 NOL10Q9BSC4 688 aaKnown RBP18.52■□□□□ 0.55
CCM2-215ENST00000482714 RRAGCQ9HB90 399 aa18.52■□□□□ 0.55
CCM2-215ENST00000482714 TCRBV5S4A2TA0A5A2 114 aa18.51■□□□□ 0.55
CCM2-215ENST00000482714 SPDYE2BA6NHP3 402 aa18.51■□□□□ 0.55
CCM2-215ENST00000482714 WNT10BO00744 389 aa18.51■□□□□ 0.55
CCM2-215ENST00000482714 SPDYE6P0CI01 402 aa18.51■□□□□ 0.55
CCM2-215ENST00000482714 APOBEC3HQ6NTF7 200 aaKnown RBP18.51■□□□□ 0.55
CCM2-215ENST00000482714 APPBP2Q92624 585 aa18.51■□□□□ 0.55
CCM2-215ENST00000482714 PRMT6Q96LA8 375 aaPredicted RBP18.51■□□□□ 0.55
CCM2-215ENST00000482714 PGAP2Q9UHJ9 254 aa18.51■□□□□ 0.55
CCM2-215ENST00000482714 ZNF532Q9HCE3 1301 aa18.5■□□□□ 0.55
CCM2-215ENST00000482714 DIXDC1Q155Q3 683 aa18.5■□□□□ 0.55
CCM2-215ENST00000482714 KIF4BQ2VIQ3 1234 aa18.5■□□□□ 0.55
CCM2-215ENST00000482714 FKBP1CQ5VVH2 108 aa18.5■□□□□ 0.55
CCM2-215ENST00000482714 SAMD7Q7Z3H4 446 aa18.5■□□□□ 0.55
CCM2-215ENST00000482714 GPBP1L1Q9HC44 474 aaPredicted RBP18.5■□□□□ 0.55
CCM2-215ENST00000482714 HELLSQ9NRZ9 838 aa18.5■□□□□ 0.55
CCM2-215ENST00000482714 DAGLAQ9Y4D2 1042 aa18.5■□□□□ 0.55
CCM2-215ENST00000482714 ZNF526Q8TF50 670 aaPredicted RBP18.49■□□□□ 0.55
CCM2-215ENST00000482714 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
CCM2-215ENST00000482714 TBC1D10BQ4KMP7 808 aaPredicted RBP18.48■□□□□ 0.55
CCM2-215ENST00000482714 ZMYM1Q5SVZ6 1142 aa18.48■□□□□ 0.55
CCM2-215ENST00000482714 RBM26Q5T8P6 1007 aaKnown RBP18.48■□□□□ 0.55
CCM2-215ENST00000482714 SKAP1Q86WV1 359 aa18.48■□□□□ 0.55
CCM2-215ENST00000482714 DOCK2Q92608 1830 aa18.47■□□□□ 0.55
CCM2-215ENST00000482714 SHTN1A0MZ66 631 aa18.47■□□□□ 0.55
CCM2-215ENST00000482714 HIRAP54198 1017 aaPredicted RBP18.47■□□□□ 0.55
CCM2-215ENST00000482714 RUFY2Q8WXA3 655 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms