RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 TMEM95Q3KNT9 176 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 PEAR1Q5VY43 1037 aaPredicted RBP9.33□□□□□ -0.92
RBM39-233ENST00000482563 TPTE2Q6XPS3 522 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 TCEAL8Q8IYN2 117 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 KDF1Q8NAX2 398 aaPredicted RBP9.33□□□□□ -0.92
RBM39-233ENST00000482563 ZNF280CQ8ND82 737 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 OR6P1Q8NGX9 317 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 CRBNQ96SW2 442 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 SMAD5Q99717 465 aaKnown RBP9.33□□□□□ -0.92
RBM39-233ENST00000482563 CCDC8Q9H0W5 538 aaPredicted RBP9.33□□□□□ -0.92
RBM39-233ENST00000482563 PPCSQ9HAB8 311 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 ABCB6Q9NP58 842 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 AKAP2Q9Y2D5 859 aa9.33□□□□□ -0.92
RBM39-233ENST00000482563 EXOC5O00471 708 aa9.32□□□□□ -0.92
RBM39-233ENST00000482563 AGMOQ6ZNB7 445 aa9.32□□□□□ -0.92
RBM39-233ENST00000482563 SPICE1Q8N0Z3 855 aa9.32□□□□□ -0.92
RBM39-233ENST00000482563 HOOK2Q96ED9 719 aa9.32□□□□□ -0.92
RBM39-233ENST00000482563 TARS2Q9BW92 718 aaKnown RBP9.32□□□□□ -0.92
RBM39-233ENST00000482563 TMX4Q9H1E5 349 aaPredicted RBP9.32□□□□□ -0.92
RBM39-233ENST00000482563 EHD4Q9H223 541 aa9.32□□□□□ -0.92
RBM39-233ENST00000482563 FCF1Q9Y324 198 aaKnown RBP9.32□□□□□ -0.92
RBM39-233ENST00000482563 RFPL3O75679 317 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 GRNP28799 593 aaKnown RBP9.31□□□□□ -0.92
RBM39-233ENST00000482563 INPP5BP32019 993 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 MCM4P33991 863 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 RAPGEF1Q13905 1077 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 MLC1Q15049 377 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 FAM102BQ5T8I3 360 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 NXNQ6DKJ4 435 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 IFNL3Q8IZI9 196 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 ZNF669Q96BR6 464 aaPredicted RBP9.31□□□□□ -0.92
RBM39-233ENST00000482563 SLC6A16Q9GZN6 736 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 SCUBE2Q9NQ36 999 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 MAPRE3Q9UPY8 281 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 RTCBQ9Y3I0 505 aaKnown RBP9.31□□□□□ -0.92
RBM39-233ENST00000482563 PHLDB1Q86UU1 1377 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 ROBO2Q9HCK4 1378 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 FAM83GA6ND36 823 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 UPK3BL1B0FP48 263 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 UPK3BL2E5RIL1 263 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 CENPCQ03188 943 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 CLCQ05315 142 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 DHX9Q08211 1270 aaKnown RBP9.31□□□□□ -0.92
RBM39-233ENST00000482563 PPP1R26Q5T8A7 1209 aaPredicted RBP9.31□□□□□ -0.92
RBM39-233ENST00000482563 ACBD5Q5T8D3 534 aaPredicted RBP9.31□□□□□ -0.92
RBM39-233ENST00000482563 ERAP2Q6P179 960 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 RUFY4Q6ZNE9 571 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 FAM178BQ8IXR5 827 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 RBBP8NLQ8NC74 664 aaPredicted RBP9.31□□□□□ -0.92
RBM39-233ENST00000482563 ANKK1Q8NFD2 765 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 CLUHP3Q96NS8 147 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 TRAK1Q9UPV9 953 aa9.31□□□□□ -0.92
RBM39-233ENST00000482563 MRPS23Q9Y3D9 190 aaKnown RBP9.31□□□□□ -0.92
RBM39-233ENST00000482563 TBX3O15119 743 aa9.3□□□□□ -0.92
RBM39-233ENST00000482563 F2P00734 622 aa9.3□□□□□ -0.92
RBM39-233ENST00000482563 SKOR1P84550 965 aa9.3□□□□□ -0.92
RBM39-233ENST00000482563 MORC3Q14149 939 aa9.3□□□□□ -0.92
RBM39-233ENST00000482563 FOXB2Q5VYV0 432 aa9.3□□□□□ -0.92
RBM39-233ENST00000482563 CMTR1Q8N1G2 835 aaKnown RBP9.3□□□□□ -0.92
RBM39-233ENST00000482563 RIN3Q8TB24 985 aa9.3□□□□□ -0.92
RBM39-233ENST00000482563 FNDC3AQ9Y2H6 1198 aaKnown RBP9.3□□□□□ -0.92
RBM39-233ENST00000482563 FAM221AA4D161 298 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 ARID5BQ14865 1188 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 PPP2R5EQ16537 467 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 GRAMD1BQ3KR37 738 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 DGKHQ86XP1 1220 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 TRIM42Q8IWZ5 723 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 MAGEB6Q8N7X4 407 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 CDK15Q96Q40 435 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 SPATA9Q9BWV2 254 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 TRIM8Q9BZR9 551 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 DZANK1Q9NVP4 752 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 WBP1LQ9NX94 342 aa9.29□□□□□ -0.92
RBM39-233ENST00000482563 TMEM238LA0A1B0GVL6 79 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
RBM39-233ENST00000482563 TTBK2Q6IQ55 1244 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 HSH2DQ96JZ2 352 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 BRMS1Q9HCU9 246 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 PPP4R2Q9NY27 417 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 CCER2I3L3R5 266 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 ENC1O14682 589 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 PAGE1O75459 146 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 RAPGEF3O95398 923 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 PTMSP20962 102 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 PBX2P40425 430 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 CLN3Q13286 438 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 IER5Q5VY09 327 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 GK5Q6ZS86 529 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 ZBTB38Q8NAP3 1195 aaPredicted RBP9.28□□□□□ -0.92
RBM39-233ENST00000482563 MYRIPQ8NFW9 859 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 YIPF4Q9BSR8 244 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 SALL4Q9UJQ4 1053 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 LZTS1Q9Y250 596 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 PCDHB5Q9Y5E4 795 aa9.28□□□□□ -0.92
RBM39-233ENST00000482563 A0A1W2PQH9 124 aa9.27□□□□□ -0.93
RBM39-233ENST00000482563 FAM163BP0C2L3 166 aa9.27□□□□□ -0.93
RBM39-233ENST00000482563 FAM83BQ5T0W9 1011 aa9.27□□□□□ -0.93
RBM39-233ENST00000482563 WWC2Q6AWC2 1192 aa9.27□□□□□ -0.93
RBM39-233ENST00000482563 IL31Q6EBC2 164 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms