RNA–Protein interactions for RNA: ENST00000482458.1

STK40-208, Transcript of serine/threonine kinase 40, human

TSL 3

Gene STK40, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK40-208	ENST00000482458	SUCLG2	Q96I99	432 aa		31.91	■■■□□ 2.7
STK40-208	ENST00000482458	MS4A4A	Q96JQ5	239 aa		31.91	■■■□□ 2.7
STK40-208	ENST00000482458	OTOF	Q9HC10	1997 aa		31.9	■■■□□ 2.7
STK40-208	ENST00000482458	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	31.9	■■■□□ 2.7
STK40-208	ENST00000482458	CNKSR2	Q8WXI2	1034 aa		31.9	■■■□□ 2.7
STK40-208	ENST00000482458	GCC1	Q96CN9	775 aa		31.9	■■■□□ 2.7
STK40-208	ENST00000482458	TMEM39B	Q9GZU3	492 aa		31.9	■■■□□ 2.7
STK40-208	ENST00000482458	ARMC5	Q96C12	935 aa		31.89	■■■□□ 2.7
STK40-208	ENST00000482458	TNNI2	P48788	182 aa		31.88	■■■□□ 2.69
STK40-208	ENST00000482458	CAP1	Q01518	475 aa		31.88	■■■□□ 2.69
STK40-208	ENST00000482458	BRI3BP	Q8WY22	251 aa		31.88	■■■□□ 2.69
STK40-208	ENST00000482458	KAZALD1	Q96I82	304 aa		31.88	■■■□□ 2.69
STK40-208	ENST00000482458	RIPOR2	Q9Y4F9	1068 aa		31.88	■■■□□ 2.69
STK40-208	ENST00000482458	MAP3K9	P80192	1104 aa		31.87	■■■□□ 2.69
STK40-208	ENST00000482458	VGLL4	Q14135	290 aa		31.87	■■■□□ 2.69
STK40-208	ENST00000482458	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	31.87	■■■□□ 2.69
STK40-208	ENST00000482458	MROH5	Q6ZUA9	1318 aa		31.86	■■■□□ 2.69
STK40-208	ENST00000482458	GRIK5	Q16478	980 aa		31.86	■■■□□ 2.69
STK40-208	ENST00000482458	VPS37D	Q86XT2	251 aa		31.86	■■■□□ 2.69
STK40-208	ENST00000482458	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	31.86	■■■□□ 2.69
STK40-208	ENST00000482458	CSAD	Q9Y600	493 aa		31.86	■■■□□ 2.69
STK40-208	ENST00000482458	CCL15-CCL14	A0A0B4J2E2	113 aa		31.85	■■■□□ 2.69
STK40-208	ENST00000482458	GTF2A2	P52657	109 aa		31.85	■■■□□ 2.69
STK40-208	ENST00000482458	CHAF1A	Q13111	956 aa	Predicted RBP	31.85	■■■□□ 2.69
STK40-208	ENST00000482458	TAF1C	Q15572	869 aa	Predicted RBP	31.85	■■■□□ 2.69
STK40-208	ENST00000482458	CCL15	Q16663	113 aa		31.85	■■■□□ 2.69
STK40-208	ENST00000482458	FBXO33	Q7Z6M2	555 aa		31.85	■■■□□ 2.69
STK40-208	ENST00000482458	ARAP2	Q8WZ64	1704 aa		31.85	■■■□□ 2.69
STK40-208	ENST00000482458	MKI67	P46013	3256 aa	Known RBP	31.85	■■■□□ 2.69
STK40-208	ENST00000482458	CENPF	P49454	3210 aa		31.84	■■■□□ 2.69
STK40-208	ENST00000482458	NBPF7	P0C2Y1	421 aa	Predicted RBP	31.84	■■■□□ 2.69
STK40-208	ENST00000482458	OTUD5	Q96G74	571 aa		31.84	■■■□□ 2.69
STK40-208	ENST00000482458	ZFYVE28	Q9HCC9	887 aa		31.84	■■■□□ 2.69
STK40-208	ENST00000482458	EN2	P19622	333 aa	Predicted RBP	31.83	■■■□□ 2.69
STK40-208	ENST00000482458	FRAT2	O75474	233 aa	Predicted RBP	31.82	■■■□□ 2.68
STK40-208	ENST00000482458	HDLBP	Q00341	1268 aa	Known RBP	31.82	■■■□□ 2.68
STK40-208	ENST00000482458	TBC1D22A	Q8WUA7	517 aa		31.82	■■■□□ 2.68
STK40-208	ENST00000482458	BICC1	Q9H694	974 aa	Known RBP	31.82	■■■□□ 2.68
STK40-208	ENST00000482458	KIAA0100	Q14667	2235 aa	Known RBP	31.81	■■■□□ 2.68
STK40-208	ENST00000482458	CACNB3	P54284	484 aa		31.81	■■■□□ 2.68
STK40-208	ENST00000482458	ARHGEF6	Q15052	776 aa		31.81	■■■□□ 2.68
STK40-208	ENST00000482458	CAVIN4	Q5BKX8	364 aa		31.81	■■■□□ 2.68
STK40-208	ENST00000482458	METTL24	Q5JXM2	366 aa		31.81	■■■□□ 2.68
STK40-208	ENST00000482458	FAM43A	Q8N2R8	423 aa		31.81	■■■□□ 2.68
STK40-208	ENST00000482458	RBBP6	Q7Z6E9	1792 aa	Known RBP	31.81	■■■□□ 2.68
STK40-208	ENST00000482458	UTY	O14607	1347 aa		31.8	■■■□□ 2.68
STK40-208	ENST00000482458	LRRC24	Q50LG9	513 aa		31.8	■■■□□ 2.68
STK40-208	ENST00000482458	TEKT1	Q969V4	418 aa		31.8	■■■□□ 2.68
STK40-208	ENST00000482458	TMEM106C	Q9BVX2	250 aa		31.8	■■■□□ 2.68
STK40-208	ENST00000482458	ANP32C	O43423	234 aa		31.79	■■■□□ 2.68
STK40-208	ENST00000482458	RABL6	Q3YEC7	729 aa	Predicted RBP	31.79	■■■□□ 2.68
STK40-208	ENST00000482458	ZNF333	Q96JL9	665 aa		31.79	■■■□□ 2.68
STK40-208	ENST00000482458	SPDYE5	A6NIY4	337 aa		31.78	■■■□□ 2.68
STK40-208	ENST00000482458	HABP4	Q5JVS0	413 aa	Known RBP	31.78	■■■□□ 2.68
STK40-208	ENST00000482458	PTCH2	Q9Y6C5	1203 aa		31.78	■■■□□ 2.68
STK40-208	ENST00000482458	SLC9C1	Q4G0N8	1177 aa		31.77	■■■□□ 2.68
STK40-208	ENST00000482458	ANKRD44	Q8N8A2	993 aa		31.77	■■■□□ 2.68
STK40-208	ENST00000482458	TMOD2	Q9NZR1	351 aa		31.77	■■■□□ 2.68
STK40-208	ENST00000482458	SNCAIP	Q9Y6H5	919 aa		31.77	■■■□□ 2.68
STK40-208	ENST00000482458	PDE8B	O95263	885 aa		31.76	■■■□□ 2.67
STK40-208	ENST00000482458	VGLL2	Q8N8G2	317 aa		31.76	■■■□□ 2.67
STK40-208	ENST00000482458	ZDHHC15	Q96MV8	337 aa		31.76	■■■□□ 2.67
STK40-208	ENST00000482458	WDHD1	O75717	1129 aa	Predicted RBP	31.75	■■■□□ 2.67
STK40-208	ENST00000482458	CETP	P11597	493 aa		31.75	■■■□□ 2.67
STK40-208	ENST00000482458	BCAM	P50895	628 aa		31.75	■■■□□ 2.67
STK40-208	ENST00000482458	NBPF11	Q86T75	865 aa		31.75	■■■□□ 2.67
STK40-208	ENST00000482458	WRNIP1	Q96S55	665 aa		31.75	■■■□□ 2.67
STK40-208	ENST00000482458	FAM83A	Q86UY5	434 aa		31.74	■■■□□ 2.67
STK40-208	ENST00000482458	ERO1B	Q86YB8	467 aa		31.74	■■■□□ 2.67
STK40-208	ENST00000482458	ZKSCAN4	Q969J2	545 aa	Predicted RBP	31.74	■■■□□ 2.67
STK40-208	ENST00000482458	MRI	Q9BWK5	157 aa		31.74	■■■□□ 2.67
STK40-208	ENST00000482458	HOOK2	Q96ED9	719 aa		31.73	■■■□□ 2.67
STK40-208	ENST00000482458	BRCA2	P51587	3418 aa		31.72	■■■□□ 2.67
STK40-208	ENST00000482458	TLR2	O60603	784 aa		31.72	■■■□□ 2.67
STK40-208	ENST00000482458	FKBP1C	Q5VVH2	108 aa		31.72	■■■□□ 2.67
STK40-208	ENST00000482458	APOBEC3H	Q6NTF7	200 aa	Known RBP	31.72	■■■□□ 2.67
STK40-208	ENST00000482458	KLHDC4	Q8TBB5	520 aa		31.72	■■■□□ 2.67
STK40-208	ENST00000482458	MAST3	O60307	1309 aa		31.72	■■■□□ 2.67
STK40-208	ENST00000482458	BTBD19	C9JJ37	291 aa		31.71	■■■□□ 2.67
STK40-208	ENST00000482458	IRF6	O14896	467 aa		31.71	■■■□□ 2.67
STK40-208	ENST00000482458	SNAPC2	Q13487	334 aa		31.71	■■■□□ 2.67
STK40-208	ENST00000482458	SLC4A8	Q2Y0W8	1093 aa		31.71	■■■□□ 2.67
STK40-208	ENST00000482458	FAM9B	Q8IZU0	186 aa		31.71	■■■□□ 2.67
STK40-208	ENST00000482458	ZCCHC17	Q9NP64	241 aa	Known RBP	31.71	■■■□□ 2.67
STK40-208	ENST00000482458	SUGT1	Q9Y2Z0	365 aa		31.71	■■■□□ 2.67
STK40-208	ENST00000482458	KIF22	Q14807	665 aa		31.7	■■■□□ 2.67
STK40-208	ENST00000482458	ARHGAP39	Q9C0H5	1083 aa		31.7	■■■□□ 2.67
STK40-208	ENST00000482458	MYC	P01106	439 aa	Predicted RBP	31.69	■■■□□ 2.66
STK40-208	ENST00000482458	IFIT1	P09914	478 aa	Known RBP	31.69	■■■□□ 2.66
STK40-208	ENST00000482458	PPIL2	Q13356	520 aa		31.69	■■■□□ 2.66
STK40-208	ENST00000482458	DCAF15	Q66K64	600 aa		31.69	■■■□□ 2.66
STK40-208	ENST00000482458	MRPL50	Q8N5N7	158 aa	Known RBP	31.69	■■■□□ 2.66
STK40-208	ENST00000482458	LACTB	P83111	547 aa	Predicted RBP	31.68	■■■□□ 2.66
STK40-208	ENST00000482458	PUM3	Q15397	648 aa	Known RBP	31.68	■■■□□ 2.66
STK40-208	ENST00000482458	KIF16B	Q96L93	1317 aa		31.68	■■■□□ 2.66
STK40-208	ENST00000482458	FGFR2	P21802	821 aa		31.67	■■■□□ 2.66
STK40-208	ENST00000482458	HHIPL2	Q6UWX4	724 aa		31.67	■■■□□ 2.66
STK40-208	ENST00000482458	SH3TC2	Q8TF17	1288 aa		31.67	■■■□□ 2.66
STK40-208	ENST00000482458	RPAP1	Q9BWH6	1393 aa	Predicted RBP	31.67	■■■□□ 2.66
STK40-208	ENST00000482458	MIGA2	Q7L4E1	593 aa		31.66	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms