RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 TMOD2Q9NZR1 351 aa24.69■■□□□ 1.54
MSH5-215ENST00000482280 PA2G4Q9UQ80 394 aaKnown RBP24.69■■□□□ 1.54
MSH5-215ENST00000482280 SUGT1Q9Y2Z0 365 aa24.69■■□□□ 1.54
MSH5-215ENST00000482280 HDLBPQ00341 1268 aaKnown RBP24.68■■□□□ 1.54
MSH5-215ENST00000482280 RASAL3Q86YV0 1011 aa24.68■■□□□ 1.54
MSH5-215ENST00000482280 DZIP1LQ8IYY4 767 aaKnown RBP24.68■■□□□ 1.54
MSH5-215ENST00000482280 ANGEL1Q9UNK9 670 aaKnown RBP24.68■■□□□ 1.54
MSH5-215ENST00000482280 AKAP2Q9Y2D5 859 aa24.68■■□□□ 1.54
MSH5-215ENST00000482280 PCDHAC2Q9Y5I4 1007 aa24.68■■□□□ 1.54
MSH5-215ENST00000482280 TDRD3Q9H7E2 651 aaKnown RBP24.67■■□□□ 1.54
MSH5-215ENST00000482280 ZIC5Q96T25 663 aa24.66■■□□□ 1.54
MSH5-215ENST00000482280 ZNF70Q9UC06 446 aaPredicted RBP24.66■■□□□ 1.54
MSH5-215ENST00000482280 MTX1Q13505 466 aa24.65■■□□□ 1.54
MSH5-215ENST00000482280 RASA3Q14644 834 aa24.65■■□□□ 1.54
MSH5-215ENST00000482280 SPDYE2Q495Y8 402 aa24.65■■□□□ 1.54
MSH5-215ENST00000482280 TMEM57Q8N5G2 664 aa24.65■■□□□ 1.54
MSH5-215ENST00000482280 SAGE1Q9NXZ1 904 aa24.65■■□□□ 1.54
MSH5-215ENST00000482280 IREB2P48200 963 aaKnown RBP24.64■■□□□ 1.54
MSH5-215ENST00000482280 ITPRIPQ8IWB1 547 aa24.64■■□□□ 1.54
MSH5-215ENST00000482280 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.64■■□□□ 1.54
MSH5-215ENST00000482280 SEMA3EO15041 775 aa24.63■■□□□ 1.53
MSH5-215ENST00000482280 G3BP1Q13283 466 aaKnown RBP eCLIP24.63■■□□□ 1.53
MSH5-215ENST00000482280 SLC10A4Q96EP9 437 aa24.63■■□□□ 1.53
MSH5-215ENST00000482280 DENND2AQ9ULE3 1009 aa24.63■■□□□ 1.53
MSH5-215ENST00000482280 TNNQ9UQP3 1299 aa24.63■■□□□ 1.53
MSH5-215ENST00000482280 ARAP2Q8WZ64 1704 aa24.62■■□□□ 1.53
MSH5-215ENST00000482280 TCP10L2B9ZVM9 353 aa24.62■■□□□ 1.53
MSH5-215ENST00000482280 TRPA1O75762 1119 aa24.62■■□□□ 1.53
MSH5-215ENST00000482280 GORABQ5T7V8 394 aa24.62■■□□□ 1.53
MSH5-215ENST00000482280 ZGPATQ8N5A5 531 aaKnown RBP24.62■■□□□ 1.53
MSH5-215ENST00000482280 CSRNP1Q96S65 589 aa24.62■■□□□ 1.53
MSH5-215ENST00000482280 MRIQ9BWK5 157 aa24.62■■□□□ 1.53
MSH5-215ENST00000482280 SREBF2Q12772 1141 aa24.61■■□□□ 1.53
MSH5-215ENST00000482280 MKRN3Q13064 507 aaKnown RBP24.61■■□□□ 1.53
MSH5-215ENST00000482280 ZDHHC15Q96MV8 337 aa24.61■■□□□ 1.53
MSH5-215ENST00000482280 ECM29Q5VYK3 1845 aa24.61■■□□□ 1.53
MSH5-215ENST00000482280 LDHBP07195 334 aaKnown RBP24.6■■□□□ 1.53
MSH5-215ENST00000482280 OS9Q13438 667 aaPredicted RBP24.6■■□□□ 1.53
MSH5-215ENST00000482280 MVPQ14764 893 aaKnown RBP24.6■■□□□ 1.53
MSH5-215ENST00000482280 GRIK5Q16478 980 aa24.6■■□□□ 1.53
MSH5-215ENST00000482280 NBPF12Q5TAG4 269 aaPredicted RBP24.6■■□□□ 1.53
MSH5-215ENST00000482280 NEUROD6Q96NK8 337 aa24.6■■□□□ 1.53
MSH5-215ENST00000482280 RNF186Q9NXI6 227 aa24.6■■□□□ 1.53
MSH5-215ENST00000482280 UNCXA6NJT0 531 aa24.59■■□□□ 1.53
MSH5-215ENST00000482280 MS4A1P11836 297 aa24.59■■□□□ 1.53
MSH5-215ENST00000482280 TFCP2Q12800 502 aa24.59■■□□□ 1.53
MSH5-215ENST00000482280 LDLRAD1Q5T700 205 aa24.59■■□□□ 1.53
MSH5-215ENST00000482280 HHIPL2Q6UWX4 724 aa24.59■■□□□ 1.53
MSH5-215ENST00000482280 HOOK2Q96ED9 719 aa24.59■■□□□ 1.53
MSH5-215ENST00000482280 A0A1B0GUL7 405 aa24.58■■□□□ 1.53
MSH5-215ENST00000482280 PHKA1P46020 1223 aa24.58■■□□□ 1.53
MSH5-215ENST00000482280 TIMM10P62072 90 aa24.58■■□□□ 1.53
MSH5-215ENST00000482280 CCDC102BQ68D86 513 aa24.58■■□□□ 1.53
MSH5-215ENST00000482280 AOX1Q06278 1338 aa24.58■■□□□ 1.52
MSH5-215ENST00000482280 MAP3K11Q16584 847 aa24.57■■□□□ 1.52
MSH5-215ENST00000482280 ANKRD13AQ8IZ07 590 aa24.57■■□□□ 1.52
MSH5-215ENST00000482280 FZD1Q9UP38 647 aa24.57■■□□□ 1.52
MSH5-215ENST00000482280 ADORA1P30542 326 aa24.56■■□□□ 1.52
MSH5-215ENST00000482280 SLF2Q8IX21 1173 aa24.56■■□□□ 1.52
MSH5-215ENST00000482280 PNMA6EA0A0J9YXQ4 647 aa24.55■■□□□ 1.52
MSH5-215ENST00000482280 SPRYD7Q5W111 196 aa24.55■■□□□ 1.52
MSH5-215ENST00000482280 SPTY2D1Q68D10 685 aaPredicted RBP24.55■■□□□ 1.52
MSH5-215ENST00000482280 DZIP1Q86YF9 867 aaKnown RBP24.55■■□□□ 1.52
MSH5-215ENST00000482280 XAGE2Q96GT9 111 aa24.55■■□□□ 1.52
MSH5-215ENST00000482280 TMEM39BQ9GZU3 492 aa24.55■■□□□ 1.52
MSH5-215ENST00000482280 SALL1Q9NSC2 1324 aa24.55■■□□□ 1.52
MSH5-215ENST00000482280 MANSC4A6NHS7 340 aaPredicted RBP24.54■■□□□ 1.52
MSH5-215ENST00000482280 ZBTB48P10074 688 aaPredicted RBP24.54■■□□□ 1.52
MSH5-215ENST00000482280 CACNB3P54284 484 aa24.54■■□□□ 1.52
MSH5-215ENST00000482280 ABCF2Q9UG63 623 aa24.54■■□□□ 1.52
MSH5-215ENST00000482280 MYH13Q9UKX3 1938 aa24.53■■□□□ 1.52
MSH5-215ENST00000482280 PRDX5P30044 214 aa24.53■■□□□ 1.52
MSH5-215ENST00000482280 INHBEP58166 350 aa24.53■■□□□ 1.52
MSH5-215ENST00000482280 FKBP1CQ5VVH2 108 aa24.53■■□□□ 1.52
MSH5-215ENST00000482280 APOBEC3HQ6NTF7 200 aaKnown RBP24.53■■□□□ 1.52
MSH5-215ENST00000482280 FAM83AQ86UY5 434 aa24.53■■□□□ 1.52
MSH5-215ENST00000482280 CSADQ9Y600 493 aa24.53■■□□□ 1.52
MSH5-215ENST00000482280 SSC5DA1L4H1 1573 aa24.52■■□□□ 1.52
MSH5-215ENST00000482280 USP2O75604 605 aaPredicted RBP24.52■■□□□ 1.52
MSH5-215ENST00000482280 ALDH1A1P00352 501 aa24.52■■□□□ 1.52
MSH5-215ENST00000482280 TM4SF4P48230 202 aa24.52■■□□□ 1.52
MSH5-215ENST00000482280 CLMNQ96JQ2 1002 aa24.52■■□□□ 1.52
MSH5-215ENST00000482280 C1orf115Q9H7X2 142 aa24.52■■□□□ 1.52
MSH5-215ENST00000482280 SURF6O75683 361 aaKnown RBP24.51■■□□□ 1.51
MSH5-215ENST00000482280 ATP8B2P98198 1209 aa24.51■■□□□ 1.51
MSH5-215ENST00000482280 DGKZQ13574 1117 aa24.51■■□□□ 1.51
MSH5-215ENST00000482280 RASGRF1Q13972 1273 aa24.51■■□□□ 1.51
MSH5-215ENST00000482280 DIXDC1Q155Q3 683 aa24.51■■□□□ 1.51
MSH5-215ENST00000482280 DCAF15Q66K64 600 aa24.51■■□□□ 1.51
MSH5-215ENST00000482280 ABHD8Q96I13 439 aa24.51■■□□□ 1.51
MSH5-215ENST00000482280 WNK4Q96J92 1243 aa24.51■■□□□ 1.51
MSH5-215ENST00000482280 DAGLAQ9Y4D2 1042 aa24.51■■□□□ 1.51
MSH5-215ENST00000482280 PDS5AQ29RF7 1337 aaKnown RBP24.51■■□□□ 1.51
MSH5-215ENST00000482280 AKAP11Q9UKA4 1901 aa24.51■■□□□ 1.51
MSH5-215ENST00000482280 OTUD7BQ6GQQ9 843 aa24.5■■□□□ 1.51
MSH5-215ENST00000482280 TEPSINQ96N21 525 aa24.5■■□□□ 1.51
MSH5-215ENST00000482280 ZBTB7BO15156 539 aaPredicted RBP24.49■■□□□ 1.51
MSH5-215ENST00000482280 ZBTB22O15209 634 aa24.49■■□□□ 1.51
MSH5-215ENST00000482280 RLBP1P12271 317 aa24.49■■□□□ 1.51
MSH5-215ENST00000482280 SSH3Q8TE77 659 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms