RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 FGFR2P21802 821 aa16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 CRKP46108 304 aa16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 IREB2P48200 963 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 TNNI2P48788 182 aa16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 BCAMP50895 628 aa16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 INHBEP58166 350 aa16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 HDLBPQ00341 1268 aaKnown RBP16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 SPDYE2Q495Y8 402 aa16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 NBPF12Q5TAG4 269 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 SPRYD7Q5W111 196 aa16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 ATG9AQ7Z3C6 839 aa16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.79■□□□□ 0.28
CTDSP1-208ENST00000482272 KIF16BQ96L93 1317 aa16.78■□□□□ 0.28
CTDSP1-208ENST00000482272 SLC5A1P13866 664 aa16.78■□□□□ 0.28
CTDSP1-208ENST00000482272 LPIN2Q92539 896 aa16.78■□□□□ 0.28
CTDSP1-208ENST00000482272 ARHGAP45Q92619 1136 aa16.78■□□□□ 0.28
CTDSP1-208ENST00000482272 MEIS3Q99687 375 aa16.78■□□□□ 0.28
CTDSP1-208ENST00000482272 MRIQ9BWK5 157 aa16.78■□□□□ 0.28
CTDSP1-208ENST00000482272 MANSC4A6NHS7 340 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-208ENST00000482272 USP2O75604 605 aaPredicted RBP16.77■□□□□ 0.28
CTDSP1-208ENST00000482272 TBC1D8O95759 1140 aa16.77■□□□□ 0.28
CTDSP1-208ENST00000482272 CTU1Q7Z7A3 348 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-208ENST00000482272 CDAN1Q8IWY9 1227 aa16.77■□□□□ 0.28
CTDSP1-208ENST00000482272 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
CTDSP1-208ENST00000482272 CEP126Q9P2H0 1117 aa16.77■□□□□ 0.28
CTDSP1-208ENST00000482272 SUGT1Q9Y2Z0 365 aa16.77■□□□□ 0.28
CTDSP1-208ENST00000482272 LRRFIP2Q9Y608 721 aaKnown RBP16.77■□□□□ 0.28
CTDSP1-208ENST00000482272 TCP10L2B9ZVM9 353 aa16.76■□□□□ 0.27
CTDSP1-208ENST00000482272 BCAR3O75815 825 aa16.76■□□□□ 0.27
CTDSP1-208ENST00000482272 CIAO1O76071 339 aa16.76■□□□□ 0.27
CTDSP1-208ENST00000482272 ALDH1A1P00352 501 aa16.76■□□□□ 0.27
CTDSP1-208ENST00000482272 ZBTB48P10074 688 aaPredicted RBP16.76■□□□□ 0.27
CTDSP1-208ENST00000482272 ANKRD13AQ8IZ07 590 aa16.76■□□□□ 0.27
CTDSP1-208ENST00000482272 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
CTDSP1-208ENST00000482272 MAST3O60307 1309 aa16.75■□□□□ 0.27
CTDSP1-208ENST00000482272 IPO8O15397 1037 aaKnown RBP16.75■□□□□ 0.27
CTDSP1-208ENST00000482272 WDR66Q8TBY9 1149 aa16.75■□□□□ 0.27
CTDSP1-208ENST00000482272 WNK4Q96J92 1243 aa16.75■□□□□ 0.27
CTDSP1-208ENST00000482272 SIL1Q9H173 461 aa16.75■□□□□ 0.27
CTDSP1-208ENST00000482272 GNL3LQ9NVN8 582 aaKnown RBP16.75■□□□□ 0.27
CTDSP1-208ENST00000482272 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
CTDSP1-208ENST00000482272 GPR25O00155 361 aa16.74■□□□□ 0.27
CTDSP1-208ENST00000482272 IL15P40933 162 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-208ENST00000482272 RGS19P49795 217 aa16.74■□□□□ 0.27
CTDSP1-208ENST00000482272 NOM1Q5C9Z4 860 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-208ENST00000482272 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
CTDSP1-208ENST00000482272 ZNF296Q8WUU4 475 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-208ENST00000482272 CLMNQ96JQ2 1002 aa16.74■□□□□ 0.27
CTDSP1-208ENST00000482272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.74■□□□□ 0.27
CTDSP1-208ENST00000482272 GNAI3P08754 354 aa16.73■□□□□ 0.27
CTDSP1-208ENST00000482272 TRIM27P14373 513 aa16.73■□□□□ 0.27
CTDSP1-208ENST00000482272 PKN2Q16513 984 aaKnown RBP16.73■□□□□ 0.27
CTDSP1-208ENST00000482272 OTUD7BQ6GQQ9 843 aa16.73■□□□□ 0.27
CTDSP1-208ENST00000482272 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
CTDSP1-208ENST00000482272 ZDHHC15Q96MV8 337 aa16.73■□□□□ 0.27
CTDSP1-208ENST00000482272 TEPSINQ96N21 525 aa16.73■□□□□ 0.27
CTDSP1-208ENST00000482272 CFHR5Q9BXR6 569 aa16.73■□□□□ 0.27
CTDSP1-208ENST00000482272 MLLT1Q03111 559 aaPredicted RBP16.72■□□□□ 0.27
CTDSP1-208ENST00000482272 ATP2B3Q16720 1220 aa16.72■□□□□ 0.27
CTDSP1-208ENST00000482272 IFNL1Q8IU54 200 aa16.72■□□□□ 0.27
CTDSP1-208ENST00000482272 TMEM39BQ9GZU3 492 aa16.72■□□□□ 0.27
CTDSP1-208ENST00000482272 COPRSQ9NQ92 184 aa16.72■□□□□ 0.27
CTDSP1-208ENST00000482272 FKTNO75072 461 aa16.71■□□□□ 0.27
CTDSP1-208ENST00000482272 MAP3K9P80192 1104 aa16.71■□□□□ 0.27
CTDSP1-208ENST00000482272 DIEXFQ68CQ4 756 aaKnown RBP16.71■□□□□ 0.27
CTDSP1-208ENST00000482272 HOOK2Q96ED9 719 aa16.71■□□□□ 0.27
CTDSP1-208ENST00000482272 GJA5P36382 358 aa16.7■□□□□ 0.26
CTDSP1-208ENST00000482272 CACNB3P54284 484 aa16.7■□□□□ 0.26
CTDSP1-208ENST00000482272 FKBP1CQ5VVH2 108 aa16.7■□□□□ 0.26
CTDSP1-208ENST00000482272 APOBEC3HQ6NTF7 200 aaKnown RBP16.7■□□□□ 0.26
CTDSP1-208ENST00000482272 FAM83AQ86UY5 434 aa16.7■□□□□ 0.26
CTDSP1-208ENST00000482272 FRAT1Q92837 279 aaPredicted RBP16.7■□□□□ 0.26
CTDSP1-208ENST00000482272 R3HDMLQ9H3Y0 253 aa16.7■□□□□ 0.26
CTDSP1-208ENST00000482272 ELP3Q9H9T3 547 aa16.7■□□□□ 0.26
CTDSP1-208ENST00000482272 DENND2AQ9ULE3 1009 aa16.7■□□□□ 0.26
CTDSP1-208ENST00000482272 SEMA3EO15041 775 aa16.69■□□□□ 0.26
CTDSP1-208ENST00000482272 ADORA1P30542 326 aa16.69■□□□□ 0.26
CTDSP1-208ENST00000482272 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
CTDSP1-208ENST00000482272 CLUAP1Q96AJ1 413 aa16.69■□□□□ 0.26
CTDSP1-208ENST00000482272 CSADQ9Y600 493 aa16.69■□□□□ 0.26
CTDSP1-208ENST00000482272 SRGAP3O43295 1099 aa16.68■□□□□ 0.26
CTDSP1-208ENST00000482272 PHKA1P46020 1223 aa16.68■□□□□ 0.26
CTDSP1-208ENST00000482272 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
CTDSP1-208ENST00000482272 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-208ENST00000482272 OPTNQ96CV9 577 aa16.68■□□□□ 0.26
CTDSP1-208ENST00000482272 AKAP2Q9Y2D5 859 aa16.68■□□□□ 0.26
CTDSP1-208ENST00000482272 TESPA1A2RU30 521 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-208ENST00000482272 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTDSP1-208ENST00000482272 LDHBP07195 334 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-208ENST00000482272 TIMM10P62072 90 aa16.67■□□□□ 0.26
CTDSP1-208ENST00000482272 ZGPATQ8N5A5 531 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-208ENST00000482272 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.262e-6■□□□□ 8
CTDSP1-208ENST00000482272 SALL1Q9NSC2 1324 aa16.67■□□□□ 0.26
CTDSP1-208ENST00000482272 ZBTB22O15209 634 aa16.66■□□□□ 0.26
CTDSP1-208ENST00000482272 GNAI2P04899 355 aa16.66■□□□□ 0.26
CTDSP1-208ENST00000482272 PRDX5P30044 214 aa16.66■□□□□ 0.26
CTDSP1-208ENST00000482272 GTF2A2P52657 109 aa16.66■□□□□ 0.26
CTDSP1-208ENST00000482272 MTX1Q13505 466 aa16.66■□□□□ 0.26
CTDSP1-208ENST00000482272 VGLL4Q14135 290 aa16.66■□□□□ 0.26
CTDSP1-208ENST00000482272 DCAF15Q66K64 600 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms