RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 CFHR5Q9BXR6 569 aa12.14□□□□□ -0.47
TMEM39A-207ENST00000482162 CASP8AP2Q9UKL3 1982 aa12.14□□□□□ -0.47
TMEM39A-207ENST00000482162 USP2O75604 605 aaPredicted RBP12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 TRPA1O75762 1119 aa12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 BCAR3O75815 825 aa12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 GNAI3P08754 354 aa12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 SLC5A1P13866 664 aa12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 FKBP1CQ5VVH2 108 aa12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 SPRYD7Q5W111 196 aa12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 DIEXFQ68CQ4 756 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 APOBEC3HQ6NTF7 200 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 HHIPL2Q6UWX4 724 aa12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 TDRD3Q9H7E2 651 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 CEP126Q9P2H0 1117 aa12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 ANGEL1Q9UNK9 670 aaKnown RBP12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 IQSEC3Q9UPP2 1182 aaPredicted RBP12.13□□□□□ -0.47
TMEM39A-207ENST00000482162 ECM29Q5VYK3 1845 aa12.12□□□□□ -0.47
TMEM39A-207ENST00000482162 PPP1R12BO60237 982 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-207ENST00000482162 TNFAIP1Q13829 316 aa12.12□□□□□ -0.47
TMEM39A-207ENST00000482162 TTLL12Q14166 644 aaPredicted RBP12.12□□□□□ -0.47
TMEM39A-207ENST00000482162 WDR66Q8TBY9 1149 aa12.12□□□□□ -0.47
TMEM39A-207ENST00000482162 SEMA3EO15041 775 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 RBM5P52756 815 aaKnown RBP eCLIP12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 INHBEP58166 350 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 ATP2B3Q16720 1220 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 TEKT1Q969V4 418 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 SLC10A4Q96EP9 437 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 MCOLN1Q9GZU1 580 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 VEZTQ9HBM0 779 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 FZD1Q9UP38 647 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 PA2G4Q9UQ80 394 aaKnown RBP12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 TNNQ9UQP3 1299 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 AKAP11Q9UKA4 1901 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 SALL1Q9NSC2 1324 aa12.11□□□□□ -0.47
TMEM39A-207ENST00000482162 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 ZBTB48P10074 688 aaPredicted RBP12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 RGS19P49795 217 aa12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 PRKG1Q13976 671 aa12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 FAM83AQ86UY5 434 aa12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 CDAN1Q8IWY9 1227 aa12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 CLMNQ96JQ2 1002 aa12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 SIL1Q9H173 461 aa12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 ARAP2Q8WZ64 1704 aa12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 MAST3O60307 1309 aa12.1□□□□□ -0.47
TMEM39A-207ENST00000482162 MANSC4A6NHS7 340 aaPredicted RBP12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 SRGAP3O43295 1099 aa12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 GNAI2P04899 355 aa12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 PHKA1P46020 1223 aa12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 HNRNPUQ00839 825 aaKnown RBP eCLIP12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 SREBF2Q12772 1141 aa12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 ZKSCAN2Q63HK3 967 aa12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 ANKRD13AQ8IZ07 590 aa12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 WNK4Q96J92 1243 aa12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 GNL3LQ9NVN8 582 aaKnown RBP12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 PDS5AQ29RF7 1337 aaKnown RBP12.09□□□□□ -0.47
TMEM39A-207ENST00000482162 ADORA1P30542 326 aa12.08□□□□□ -0.48
TMEM39A-207ENST00000482162 GJA5P36382 358 aa12.08□□□□□ -0.48
TMEM39A-207ENST00000482162 IREB2P48200 963 aaKnown RBP12.08□□□□□ -0.48
TMEM39A-207ENST00000482162 TNNI2P48788 182 aa12.08□□□□□ -0.48
TMEM39A-207ENST00000482162 TIMM10P62072 90 aa12.08□□□□□ -0.48
TMEM39A-207ENST00000482162 CCDC102BQ68D86 513 aa12.08□□□□□ -0.48
TMEM39A-207ENST00000482162 TMEM57Q8N5G2 664 aa12.08□□□□□ -0.48
TMEM39A-207ENST00000482162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.08□□□□□ -0.48
TMEM39A-207ENST00000482162 FAM163AQ96GL9 167 aaPredicted RBP12.08□□□□□ -0.48
TMEM39A-207ENST00000482162 DENND2AQ9ULE3 1009 aa12.08□□□□□ -0.48
TMEM39A-207ENST00000482162 PNMA6EA0A0J9YXQ4 647 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 CCDC85CA6NKD9 419 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 TCP10L2B9ZVM9 353 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 TBC1D8O95759 1140 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 DGKZQ13574 1117 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 POLA2Q14181 598 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 IFNL1Q8IU54 200 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 FRAT1Q92837 279 aaPredicted RBP12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 MS4A4AQ96JQ5 239 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 R3HDMLQ9H3Y0 253 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 DAGLAQ9Y4D2 1042 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 ZBED9Q6R2W3 1325 aa12.07□□□□□ -0.48
TMEM39A-207ENST00000482162 RPAP1Q9BWH6 1393 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 LAMB1P07942 1786 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 A0A1B0GUL7 405 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 GPR25O00155 361 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 ZBTB7BO15156 539 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 ALDH1A1P00352 501 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 PRDX5P30044 214 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 CACNB3P54284 484 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 TFCP2Q12800 502 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 RASGRF1Q13972 1273 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 CDC42EP5Q6NZY7 148 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 CTU1Q7Z7A3 348 aaKnown RBP12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 SSH3Q8TE77 659 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 ZNF296Q8WUU4 475 aaPredicted RBP12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 CLUAP1Q96AJ1 413 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 XAGE2Q96GT9 111 aa12.06□□□□□ -0.48
TMEM39A-207ENST00000482162 PTPN18Q99952 460 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms