RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 SLC10A4Q96EP9 437 aa23.2■■□□□ 1.3
CLK1-211ENST00000481641 MEIS3Q99687 375 aa23.2■■□□□ 1.3
CLK1-211ENST00000481641 TCP10L2B9ZVM9 353 aa23.19■■□□□ 1.3
CLK1-211ENST00000481641 USP2O75604 605 aaPredicted RBP23.19■■□□□ 1.3
CLK1-211ENST00000481641 PA2G4Q9UQ80 394 aaKnown RBP23.19■■□□□ 1.3
CLK1-211ENST00000481641 SLC5A1P13866 664 aa23.18■■□□□ 1.3
CLK1-211ENST00000481641 TBC1D22AQ8WUA7 517 aa23.18■■□□□ 1.3
CLK1-211ENST00000481641 CACNB3P54284 484 aa23.17■■□□□ 1.3
CLK1-211ENST00000481641 LPIN2Q92539 896 aa23.17■■□□□ 1.3
CLK1-211ENST00000481641 TNNQ9UQP3 1299 aa23.17■■□□□ 1.3
CLK1-211ENST00000481641 KIF16BQ96L93 1317 aa23.16■■□□□ 1.3
CLK1-211ENST00000481641 SREBF2Q12772 1141 aa23.16■■□□□ 1.3
CLK1-211ENST00000481641 TNFAIP1Q13829 316 aa23.16■■□□□ 1.3
CLK1-211ENST00000481641 WNK4Q96J92 1243 aa23.16■■□□□ 1.3
CLK1-211ENST00000481641 TEPSINQ96N21 525 aa23.16■■□□□ 1.3
CLK1-211ENST00000481641 TMEM39BQ9GZU3 492 aa23.16■■□□□ 1.3
CLK1-211ENST00000481641 R3HDMLQ9H3Y0 253 aa23.16■■□□□ 1.3
CLK1-211ENST00000481641 IREB2P48200 963 aaKnown RBP23.15■■□□□ 1.3
CLK1-211ENST00000481641 ZNF296Q8WUU4 475 aaPredicted RBP23.15■■□□□ 1.3
CLK1-211ENST00000481641 TEKT1Q969V4 418 aa23.15■■□□□ 1.3
CLK1-211ENST00000481641 BCAR3O75815 825 aa23.14■■□□□ 1.29
CLK1-211ENST00000481641 CIAO1O76071 339 aa23.14■■□□□ 1.29
CLK1-211ENST00000481641 GJA5P36382 358 aa23.14■■□□□ 1.29
CLK1-211ENST00000481641 HDLBPQ00341 1268 aaKnown RBP23.14■■□□□ 1.29
CLK1-211ENST00000481641 ATP2B3Q16720 1220 aa23.14■■□□□ 1.29
CLK1-211ENST00000481641 INTS3Q68E01 1043 aaKnown RBP23.14■■□□□ 1.29
CLK1-211ENST00000481641 MIER1Q8N108 512 aa23.14■■□□□ 1.29
CLK1-211ENST00000481641 CEP126Q9P2H0 1117 aa23.14■■□□□ 1.29
CLK1-211ENST00000481641 CTU1Q7Z7A3 348 aaKnown RBP23.13■■□□□ 1.29
CLK1-211ENST00000481641 ARHGAP45Q92619 1136 aa23.13■■□□□ 1.29
CLK1-211ENST00000481641 MYH13Q9UKX3 1938 aa23.13■■□□□ 1.29
CLK1-211ENST00000481641 GPR25O00155 361 aa23.12■■□□□ 1.29
CLK1-211ENST00000481641 APOBEC3HQ6NTF7 200 aaKnown RBP23.12■■□□□ 1.29
CLK1-211ENST00000481641 FRAT1Q92837 279 aaPredicted RBP23.12■■□□□ 1.29
CLK1-211ENST00000481641 ZDHHC15Q96MV8 337 aa23.12■■□□□ 1.29
CLK1-211ENST00000481641 ELP3Q9H9T3 547 aa23.12■■□□□ 1.29
CLK1-211ENST00000481641 FBXO3Q9UK99 471 aa23.12■■□□□ 1.29
CLK1-211ENST00000481641 OTOFQ9HC10 1997 aa23.12■■□□□ 1.29
CLK1-211ENST00000481641 MANSC4A6NHS7 340 aaPredicted RBP23.11■■□□□ 1.29
CLK1-211ENST00000481641 ZBTB48P10074 688 aaPredicted RBP23.11■■□□□ 1.29
CLK1-211ENST00000481641 TNNI2P48788 182 aa23.11■■□□□ 1.29
CLK1-211ENST00000481641 ANKRD13AQ8IZ07 590 aa23.11■■□□□ 1.29
CLK1-211ENST00000481641 HDAC5Q9UQL6 1122 aa23.11■■□□□ 1.29
CLK1-211ENST00000481641 TRIM27P14373 513 aa23.1■■□□□ 1.29
CLK1-211ENST00000481641 ADORA1P30542 326 aa23.1■■□□□ 1.29
CLK1-211ENST00000481641 IL15P40933 162 aaPredicted RBP23.1■■□□□ 1.29
CLK1-211ENST00000481641 PHKA1P46020 1223 aa23.1■■□□□ 1.29
CLK1-211ENST00000481641 IFNL1Q8IU54 200 aa23.1■■□□□ 1.29
CLK1-211ENST00000481641 WDR66Q8TBY9 1149 aa23.1■■□□□ 1.29
CLK1-211ENST00000481641 MRIQ9BWK5 157 aa23.1■■□□□ 1.29
CLK1-211ENST00000481641 COPRSQ9NQ92 184 aa23.1■■□□□ 1.29
CLK1-211ENST00000481641 SUGT1Q9Y2Z0 365 aa23.1■■□□□ 1.29
CLK1-211ENST00000481641 UNCXA6NJT0 531 aa23.09■■□□□ 1.29
CLK1-211ENST00000481641 IGF2BP3O00425 579 aaKnown RBP eCLIP23.09■■□□□ 1.29
CLK1-211ENST00000481641 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.09■■□□□ 1.29
CLK1-211ENST00000481641 CNKSR2Q8WXI2 1034 aa23.09■■□□□ 1.29
CLK1-211ENST00000481641 CLUAP1Q96AJ1 413 aa23.09■■□□□ 1.29
CLK1-211ENST00000481641 MAST3O60307 1309 aa23.08■■□□□ 1.29
CLK1-211ENST00000481641 GNAI3P08754 354 aa23.08■■□□□ 1.29
CLK1-211ENST00000481641 PRDX5P30044 214 aa23.08■■□□□ 1.29
CLK1-211ENST00000481641 DIXDC1Q155Q3 683 aa23.08■■□□□ 1.29
CLK1-211ENST00000481641 HHIPL2Q6UWX4 724 aa23.08■■□□□ 1.29
CLK1-211ENST00000481641 IPO8O15397 1037 aaKnown RBP23.07■■□□□ 1.28
CLK1-211ENST00000481641 SRGAP3O43295 1099 aa23.07■■□□□ 1.28
CLK1-211ENST00000481641 RGS19P49795 217 aa23.07■■□□□ 1.28
CLK1-211ENST00000481641 INHBEP58166 350 aa23.07■■□□□ 1.28
CLK1-211ENST00000481641 TIMM10P62072 90 aa23.07■■□□□ 1.28
CLK1-211ENST00000481641 ATF7IPQ6VMQ6 1270 aa23.07■■□□□ 1.28
CLK1-211ENST00000481641 OPTNQ96CV9 577 aa23.07■■□□□ 1.28
CLK1-211ENST00000481641 CFHR5Q9BXR6 569 aa23.07■■□□□ 1.28
CLK1-211ENST00000481641 TMOD2Q9NZR1 351 aa23.07■■□□□ 1.28
CLK1-211ENST00000481641 MAP3K9P80192 1104 aa23.06■■□□□ 1.28
CLK1-211ENST00000481641 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
CLK1-211ENST00000481641 GNL3LQ9NVN8 582 aaKnown RBP23.06■■□□□ 1.28
CLK1-211ENST00000481641 DAGLAQ9Y4D2 1042 aa23.06■■□□□ 1.28
CLK1-211ENST00000481641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.06■■□□□ 1.28
CLK1-211ENST00000481641 FKTNO75072 461 aa23.05■■□□□ 1.28
CLK1-211ENST00000481641 ALDH1A1P00352 501 aa23.05■■□□□ 1.28
CLK1-211ENST00000481641 MLLT1Q03111 559 aaPredicted RBP23.05■■□□□ 1.28
CLK1-211ENST00000481641 TFCP2Q12800 502 aa23.05■■□□□ 1.28
CLK1-211ENST00000481641 VGLL4Q14135 290 aa23.05■■□□□ 1.28
CLK1-211ENST00000481641 NOM1Q5C9Z4 860 aaKnown RBP23.05■■□□□ 1.28
CLK1-211ENST00000481641 DIEXFQ68CQ4 756 aaKnown RBP23.05■■□□□ 1.28
CLK1-211ENST00000481641 CCDC102BQ68D86 513 aa23.05■■□□□ 1.28
CLK1-211ENST00000481641 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.05■■□□□ 1.28
CLK1-211ENST00000481641 PTPN18Q99952 460 aa23.05■■□□□ 1.28
CLK1-211ENST00000481641 LAMB1P07942 1786 aa23.04■■□□□ 1.28
CLK1-211ENST00000481641 SOX10P56693 466 aa23.04■■□□□ 1.28
CLK1-211ENST00000481641 FAM83AQ86UY5 434 aa23.04■■□□□ 1.28
CLK1-211ENST00000481641 DENND2AQ9ULE3 1009 aa23.04■■□□□ 1.28
CLK1-211ENST00000481641 HPS5Q9UPZ3 1129 aa23.04■■□□□ 1.28
CLK1-211ENST00000481641 LDHBP07195 334 aaKnown RBP23.03■■□□□ 1.28
CLK1-211ENST00000481641 MTX1Q13505 466 aa23.03■■□□□ 1.28
CLK1-211ENST00000481641 FKBP1CQ5VVH2 108 aa23.03■■□□□ 1.28
CLK1-211ENST00000481641 CDC42EP5Q6NZY7 148 aa23.03■■□□□ 1.28
CLK1-211ENST00000481641 TCP10Q12799 353 aa23.02■■□□□ 1.28
CLK1-211ENST00000481641 MIGA2Q7L4E1 593 aa23.02■■□□□ 1.28
CLK1-211ENST00000481641 TMEM57Q8N5G2 664 aa23.02■■□□□ 1.28
CLK1-211ENST00000481641 MS4A4AQ96JQ5 239 aa23.02■■□□□ 1.28
CLK1-211ENST00000481641 CSADQ9Y600 493 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms