RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
SYNE1-225ENST00000481502 SGSM2O43147 1006 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 IDH1O75874 414 aaKnown RBP9.94□□□□□ -0.82
SYNE1-225ENST00000481502 BAG3O95817 575 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 PDE6AP16499 860 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 PLCG2P16885 1265 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 GNAT2P19087 354 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 PPP4CP60510 307 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 DOK7Q18PE1 504 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 C8orf34Q49A92 452 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 CIAPIN1Q6FI81 312 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 RSBN1LQ6PCB5 846 aaPredicted RBP9.94□□□□□ -0.82
SYNE1-225ENST00000481502 TBC1D9Q6ZT07 1266 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 SKAP1Q86WV1 359 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 BACH2Q9BYV9 841 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 PIH1D3Q9NQM4 214 aaKnown RBP9.94□□□□□ -0.82
SYNE1-225ENST00000481502 SERPINA10Q9UK55 444 aa9.94□□□□□ -0.82
SYNE1-225ENST00000481502 COL1A1P02452 1464 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-225ENST00000481502 TCRBV5S4A2TA0A5A2 114 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 YDJCA8MPS7 323 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 YBX3P16989 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
SYNE1-225ENST00000481502 NT5C2P49902 561 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 CHAF1AQ13111 956 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-225ENST00000481502 NAA16Q6N069 864 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-225ENST00000481502 GIMAP6Q6P9H5 292 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 PI16Q6UXB8 463 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 SLC51AQ86UW1 340 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 DZIP1Q86YF9 867 aaKnown RBP9.93□□□□□ -0.82
SYNE1-225ENST00000481502 GPC2Q8N158 579 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 OGFOD1Q8N543 542 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 MTMR14Q8NCE2 650 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 GPR101Q96P66 508 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-225ENST00000481502 GMLQ99445 158 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 ESYT1Q9BSJ8 1104 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 UPF2Q9HAU5 1272 aaKnown RBP9.93□□□□□ -0.82
SYNE1-225ENST00000481502 RAI14Q9P0K7 980 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 HDAC9Q9UKV0 1011 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 IQSEC3Q9UPP2 1182 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-225ENST00000481502 CHD4Q14839 1912 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 DOCK2Q92608 1830 aa9.93□□□□□ -0.82
SYNE1-225ENST00000481502 GAKO14976 1311 aa9.92□□□□□ -0.82
SYNE1-225ENST00000481502 ZNF532Q9HCE3 1301 aa9.92□□□□□ -0.82
SYNE1-225ENST00000481502 GPR75-ASB3A0A0A6YYF3 556 aa9.92□□□□□ -0.82
SYNE1-225ENST00000481502 PRDX5P30044 214 aa9.92□□□□□ -0.82
SYNE1-225ENST00000481502 MECOMQ03112 1051 aa9.92□□□□□ -0.82
SYNE1-225ENST00000481502 CXCL9Q07325 125 aa9.92□□□□□ -0.82
SYNE1-225ENST00000481502 DPY19L2Q6NUT2 758 aa9.92□□□□□ -0.82
SYNE1-225ENST00000481502 KIAA1211Q6ZU35 1233 aa9.92□□□□□ -0.82
SYNE1-225ENST00000481502 EDC3Q96F86 508 aaKnown RBP9.92□□□□□ -0.82
SYNE1-225ENST00000481502 NOL10Q9BSC4 688 aaKnown RBP9.92□□□□□ -0.82
SYNE1-225ENST00000481502 MYH13Q9UKX3 1938 aa9.92□□□□□ -0.82
SYNE1-225ENST00000481502 DICER1Q9UPY3 1922 aaKnown RBP9.92□□□□□ -0.82
SYNE1-225ENST00000481502 PSME4Q14997 1843 aa9.91□□□□□ -0.82
SYNE1-225ENST00000481502 MROH7-TTC4A0A0A0MT08 1334 aa9.91□□□□□ -0.82
SYNE1-225ENST00000481502 ZMYM6O95789 1325 aa9.91□□□□□ -0.82
SYNE1-225ENST00000481502 PSMD14O00487 310 aa9.91□□□□□ -0.82
SYNE1-225ENST00000481502 CYP7A1P22680 504 aa9.91□□□□□ -0.82
SYNE1-225ENST00000481502 NMIQ13287 307 aaPredicted RBP9.91□□□□□ -0.82
SYNE1-225ENST00000481502 CWC27Q6UX04 472 aaKnown RBP9.91□□□□□ -0.82
SYNE1-225ENST00000481502 MAGEB6Q8N7X4 407 aa9.91□□□□□ -0.82
SYNE1-225ENST00000481502 TEKT1Q969V4 418 aa9.91□□□□□ -0.82
SYNE1-225ENST00000481502 AIDAQ96BJ3 306 aa9.91□□□□□ -0.82
SYNE1-225ENST00000481502 ZDHHC15Q96MV8 337 aa9.91□□□□□ -0.82
SYNE1-225ENST00000481502 DSCC1Q9BVC3 393 aa9.91□□□□□ -0.82
SYNE1-225ENST00000481502 TTF2Q9UNY4 1162 aaKnown RBP9.91□□□□□ -0.82
SYNE1-225ENST00000481502 AK9Q5TCS8 1911 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 CCDC171Q6TFL3 1326 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 CCDC88AQ3V6T2 1871 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 USP17L8P0C7I0 530 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 ZNF280AP59817 542 aaPredicted RBP9.9□□□□□ -0.82
SYNE1-225ENST00000481502 RASSF7Q02833 373 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 ALX1Q15699 326 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 FKBP1CQ5VVH2 108 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 CERS5Q8N5B7 392 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 MAP4K1Q92918 833 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 OSBP2Q969R2 916 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 STRBPQ96SI9 672 aaKnown RBP9.9□□□□□ -0.82
SYNE1-225ENST00000481502 RIOK1Q9BRS2 568 aaKnown RBP9.9□□□□□ -0.82
SYNE1-225ENST00000481502 NACAP1Q9BZK3 213 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 ATP8A2Q9NTI2 1148 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 CTNNA3Q9UI47 895 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 WWC3Q9ULE0 1092 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 NDUFB9Q9Y6M9 179 aa9.9□□□□□ -0.82
SYNE1-225ENST00000481502 A0A0D9SFI3 127 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 MAGEB6P1A0A0J9YX57 407 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 PATL2C9JE40 543 aaKnown RBP9.89□□□□□ -0.83
SYNE1-225ENST00000481502 GPAA1O43292 621 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 PRELPP51888 382 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 ANAPC15P60006 121 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 C9orf131Q5VYM1 1079 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 ZNF384Q8TF68 577 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 IL17RAQ96F46 866 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 L3MBTL3Q96JM7 780 aaPredicted RBP9.89□□□□□ -0.83
SYNE1-225ENST00000481502 FAM227BQ96M60 508 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 CRNKL1Q9BZJ0 848 aaKnown RBP9.89□□□□□ -0.83
SYNE1-225ENST00000481502 PUS7LQ9H0K6 701 aaKnown RBP9.89□□□□□ -0.83
SYNE1-225ENST00000481502 KCNQ5Q9NR82 932 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 RNF181Q9P0P0 153 aa9.89□□□□□ -0.83
SYNE1-225ENST00000481502 SBF1O95248 1867 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms