RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 RDH13Q8NBN7 331 aa5.3□□□□□ -1.56
VPS13D-208ENST00000481484 BEGAINQ9BUH8 593 aa5.3□□□□□ -1.56
VPS13D-208ENST00000481484 METTL22Q9BUU2 404 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-208ENST00000481484 MKRN1Q9UHC7 482 aaKnown RBP5.3□□□□□ -1.56
VPS13D-208ENST00000481484 GGA1Q9UJY5 639 aa5.3□□□□□ -1.56
VPS13D-208ENST00000481484 PITPNM2Q9BZ72 1349 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 FANCIQ9NVI1 1328 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 ANP32CO43423 234 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 ECE2O60344 883 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 UFL1O94874 794 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 MAP2K2P36507 400 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 EPS15P42566 896 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 VEGFBP49765 207 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 BRPF1P55201 1214 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-208ENST00000481484 CTSWP56202 376 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 RPS8P62241 208 aaKnown RBP5.29□□□□□ -1.56
VPS13D-208ENST00000481484 DEFB115Q30KQ5 88 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 MAP1SQ66K74 1059 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-208ENST00000481484 KSR2Q6VAB6 950 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 CDC37L1Q7L3B6 337 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 ANKRD18AQ8IVF6 992 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 AGBL3Q8NEM8 1001 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 CCDC102AQ96A19 550 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 FAM89AQ96GI7 184 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 CAPNS2Q96L46 248 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 MYD88Q99836 296 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 PGAP2Q9UHJ9 254 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 TLL2Q9Y6L7 1015 aa5.29□□□□□ -1.56
VPS13D-208ENST00000481484 WDR33Q9C0J8 1336 aaKnown RBP5.28□□□□□ -1.56
VPS13D-208ENST00000481484 OTOFQ9HC10 1997 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 CASP8AP2Q9UKL3 1982 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 ATP5J2-PTCD1G3V325 749 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 C6orf229H3BNL8 230 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 CD46P15529 392 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 ATP2B4P23634 1241 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 GGCXP38435 758 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 FKBP1BP68106 108 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 FUT2Q10981 343 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 NOGQ13253 232 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 KIF4BQ2VIQ3 1234 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 TWISTNBQ3B726 338 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-208ENST00000481484 PUS10Q3MIT2 529 aaKnown RBP5.28□□□□□ -1.56
VPS13D-208ENST00000481484 MORN1Q5T089 497 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 WDR63Q8IWG1 891 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 WWC1Q8IX03 1113 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 TBC1D16Q8TBP0 767 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 CELF1Q92879 486 aaKnown RBP5.28□□□□□ -1.56
VPS13D-208ENST00000481484 PLA2G12BQ9BX93 195 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 ZC3H12CQ9C0D7 883 aaKnown RBP5.28□□□□□ -1.56
VPS13D-208ENST00000481484 MRS2Q9HD23 443 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 ANKIB1Q9P2G1 1089 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 NSFL1CQ9UNZ2 370 aaKnown RBP5.28□□□□□ -1.56
VPS13D-208ENST00000481484 MAP3K2Q9Y2U5 619 aa5.28□□□□□ -1.56
VPS13D-208ENST00000481484 V9GY48 417 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-208ENST00000481484 PI4KAP2A4QPH2 592 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 YDJCA8MPS7 323 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 NEURL1BA8MQ27 555 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 PSMD14O00487 310 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 TCERG1O14776 1098 aaKnown RBP5.27□□□□□ -1.57
VPS13D-208ENST00000481484 FOXN1O15353 648 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 RAD17O75943 681 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 CELF2O95319 508 aaKnown RBP5.27□□□□□ -1.57
VPS13D-208ENST00000481484 IGHMBP2P38935 993 aaKnown RBP5.27□□□□□ -1.57
VPS13D-208ENST00000481484 GPSM2P81274 684 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 MDM2Q00987 491 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-208ENST00000481484 FLIIQ13045 1269 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 FKBP5Q13451 457 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-208ENST00000481484 COL13A1Q5TAT6 717 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-208ENST00000481484 PODNQ7Z5L7 613 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 SAPCD2Q86UD0 394 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 PI4KAP1Q8N8J0 262 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 C8orf58Q8NAV2 365 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 LINS1Q8NG48 757 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 TRPM4Q8TD43 1214 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 THAP11Q96EK4 314 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 IRX2Q9BZI1 471 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-208ENST00000481484 PRKD2Q9BZL6 878 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 ANKRD2Q9GZV1 360 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 DBNDD1Q9H9R9 158 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 BSDC1Q9NW68 430 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-208ENST00000481484 SAGE1Q9NXZ1 904 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 POLLQ9UGP5 575 aa5.27□□□□□ -1.57
VPS13D-208ENST00000481484 CNOT7Q9UIV1 285 aaKnown RBP5.27□□□□□ -1.57
VPS13D-208ENST00000481484 RBBP6Q7Z6E9 1792 aaKnown RBP5.27□□□□□ -1.57
VPS13D-208ENST00000481484 RNF223E7ERA6 249 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 TLL1O43897 1013 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 ADH1BP00325 375 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 IGKV5-2P06315 115 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 VIL1P09327 827 aaKnown RBP5.26□□□□□ -1.57
VPS13D-208ENST00000481484 HSPA8P11142 646 aaKnown RBP5.26□□□□□ -1.57
VPS13D-208ENST00000481484 ZNF280AP59817 542 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-208ENST00000481484 GCKRQ14397 625 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 RSBN1LQ6PCB5 846 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-208ENST00000481484 UBE3BQ7Z3V4 1068 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 KRT26Q7Z3Y9 468 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 KRI1Q8N9T8 703 aaKnown RBP5.26□□□□□ -1.57
VPS13D-208ENST00000481484 DNAAF4Q8WXU2 420 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 TSR2Q969E8 191 aaKnown RBP5.26□□□□□ -1.57
VPS13D-208ENST00000481484 ZNF428Q96B54 188 aa5.26□□□□□ -1.57
VPS13D-208ENST00000481484 DCPSQ96C86 337 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms