RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 FOXN1O15353 648 aa14.13□□□□□ -0.15
RAPGEF1-207ENST00000481260 SURF6O75683 361 aaKnown RBP14.13□□□□□ -0.15
RAPGEF1-207ENST00000481260 G3BP1Q13283 466 aaKnown RBP eCLIP14.13□□□□□ -0.15
RAPGEF1-207ENST00000481260 NEUROD6Q96NK8 337 aa14.13□□□□□ -0.15
RAPGEF1-207ENST00000481260 DEFB129Q9H1M3 183 aa14.13□□□□□ -0.15
RAPGEF1-207ENST00000481260 ZBTB40Q9NUA8 1239 aa14.13□□□□□ -0.15
RAPGEF1-207ENST00000481260 ZNF70Q9UC06 446 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF1-207ENST00000481260 SPDYE2Q495Y8 402 aa14.12□□□□□ -0.15
RAPGEF1-207ENST00000481260 APOBEC3HQ6NTF7 200 aaKnown RBP14.12□□□□□ -0.15
RAPGEF1-207ENST00000481260 DBNDD2Q9BQY9 259 aa14.12□□□□□ -0.15
RAPGEF1-207ENST00000481260 TSKSQ9UJT2 592 aa14.12□□□□□ -0.15
RAPGEF1-207ENST00000481260 SERPINA10Q9UK55 444 aa14.12□□□□□ -0.15
RAPGEF1-207ENST00000481260 EXOC6BQ9Y2D4 811 aa14.12□□□□□ -0.15
RAPGEF1-207ENST00000481260 TCP10L2B9ZVM9 353 aa14.11□□□□□ -0.15
RAPGEF1-207ENST00000481260 NBPF12Q5TAG4 269 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF1-207ENST00000481260 TBC1D9Q6ZT07 1266 aa14.11□□□□□ -0.15
RAPGEF1-207ENST00000481260 APOBEC3FQ8IUX4 373 aaKnown RBP14.11□□□□□ -0.15
RAPGEF1-207ENST00000481260 C2orf69Q8N8R5 385 aa14.11□□□□□ -0.15
RAPGEF1-207ENST00000481260 ZNF384Q8TF68 577 aa14.11□□□□□ -0.15
RAPGEF1-207ENST00000481260 WBP1LQ9NX94 342 aa14.11□□□□□ -0.15
RAPGEF1-207ENST00000481260 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF1-207ENST00000481260 NOP58Q9Y2X3 529 aaKnown RBP14.11□□□□□ -0.15
RAPGEF1-207ENST00000481260 THSD7BQ9C0I4 1608 aa14.11□□□□□ -0.15
RAPGEF1-207ENST00000481260 OS9Q13438 667 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF1-207ENST00000481260 RASA3Q14644 834 aa14.1□□□□□ -0.15
RAPGEF1-207ENST00000481260 TNNI3KQ59H18 835 aa14.1□□□□□ -0.15
RAPGEF1-207ENST00000481260 RGMBQ6NW40 437 aa14.1□□□□□ -0.15
RAPGEF1-207ENST00000481260 TBC1D22AQ8WUA7 517 aa14.1□□□□□ -0.15
RAPGEF1-207ENST00000481260 SNRKQ9NRH2 765 aa14.1□□□□□ -0.15
RAPGEF1-207ENST00000481260 HMG20BQ9P0W2 317 aa14.1□□□□□ -0.15
RAPGEF1-207ENST00000481260 FPGT-TNNI3KV9GXZ4 949 aa14.1□□□□□ -0.15
RAPGEF1-207ENST00000481260 APBB1O00213 710 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 MCAMP43121 646 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 ZNF157P51786 506 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 MKRN3Q13064 507 aaKnown RBP14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 RASAL3Q86YV0 1011 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 WDR66Q8TBY9 1149 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 TEKT1Q969V4 418 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 EAF2Q96CJ1 260 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 TEPSINQ96N21 525 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 TMEM39BQ9GZU3 492 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 CCDC8Q9H0W5 538 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 DBNLQ9UJU6 430 aaKnown RBP14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 AKAP2Q9Y2D5 859 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 DAGLAQ9Y4D2 1042 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 NDUFB9Q9Y6M9 179 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 PAPPA2Q9BXP8 1791 aa14.09□□□□□ -0.15
RAPGEF1-207ENST00000481260 MMP14P50281 582 aa14.08□□□□□ -0.16
RAPGEF1-207ENST00000481260 TTLL12Q14166 644 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF1-207ENST00000481260 HHIPL1Q96JK4 782 aa14.08□□□□□ -0.16
RAPGEF1-207ENST00000481260 CLMNQ96JQ2 1002 aa14.08□□□□□ -0.16
RAPGEF1-207ENST00000481260 ZDHHC15Q96MV8 337 aa14.08□□□□□ -0.16
RAPGEF1-207ENST00000481260 BCL11AQ9H165 835 aa14.08□□□□□ -0.16
RAPGEF1-207ENST00000481260 IL1RAPL2Q9NP60 686 aa14.08□□□□□ -0.16
RAPGEF1-207ENST00000481260 GNL3LQ9NVN8 582 aaKnown RBP14.08□□□□□ -0.16
RAPGEF1-207ENST00000481260 DENND2AQ9ULE3 1009 aa14.08□□□□□ -0.16
RAPGEF1-207ENST00000481260 DDX19BQ9UMR2 479 aa14.08□□□□□ -0.16
RAPGEF1-207ENST00000481260 MYH13Q9UKX3 1938 aa14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 ECM29Q5VYK3 1845 aa14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 SLC10A3P09131 477 aa14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 SLURP2P0DP57 97 aa14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 ECE1P42892 770 aa14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 KIF23Q02241 960 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 NFIAQ12857 509 aa14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 CDC42EP5Q6NZY7 148 aa14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 ZFPM1Q8IX07 1006 aa14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 ANGEL1Q9UNK9 670 aaKnown RBP14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 SALL1Q9NSC2 1324 aa14.07□□□□□ -0.16
RAPGEF1-207ENST00000481260 MYO1BO43795 1136 aa14.06□□□□□ -0.16
RAPGEF1-207ENST00000481260 CAPN15O75808 1086 aa14.06□□□□□ -0.16
RAPGEF1-207ENST00000481260 LDHBP07195 334 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-207ENST00000481260 HSPA8P11142 646 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-207ENST00000481260 ARID4AP29374 1257 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF1-207ENST00000481260 HDLBPQ00341 1268 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-207ENST00000481260 PDE3AQ14432 1141 aa14.06□□□□□ -0.16
RAPGEF1-207ENST00000481260 GORABQ5T7V8 394 aa14.06□□□□□ -0.16
RAPGEF1-207ENST00000481260 SPATA5Q8NB90 893 aa14.06□□□□□ -0.16
RAPGEF1-207ENST00000481260 SEMA3EO15041 775 aa14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 USP2O75604 605 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 MS4A1P11836 297 aa14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 LBX1P52954 281 aa14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 RRP1P56182 461 aaKnown RBP14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 MECOMQ03112 1051 aa14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 LDLRAD1Q5T700 205 aa14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 HHIPL2Q6UWX4 724 aa14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 GPR108Q9NPR9 543 aa14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 FAM198AQ9UFP1 575 aa14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 SUGT1Q9Y2Z0 365 aa14.05□□□□□ -0.16
RAPGEF1-207ENST00000481260 GJA5P36382 358 aa14.04□□□□□ -0.16
RAPGEF1-207ENST00000481260 TCP10Q12799 353 aa14.04□□□□□ -0.16
RAPGEF1-207ENST00000481260 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
RAPGEF1-207ENST00000481260 MRIQ9BWK5 157 aa14.04□□□□□ -0.16
RAPGEF1-207ENST00000481260 PIH1D3Q9NQM4 214 aaKnown RBP14.04□□□□□ -0.16
RAPGEF1-207ENST00000481260 ZBTB22O15209 634 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 SMARCA5O60264 1052 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 CYP2E1P05181 493 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 MAP2K2P36507 400 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 ZAP70P43403 619 aa14.03□□□□□ -0.16
RAPGEF1-207ENST00000481260 FKBP1BP68106 108 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms