RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 PCNX4Q63HM2 1172 aa13.92□□□□□ -0.18
CUL3-209ENST00000481135 TXNDC11Q6PKC3 985 aa13.92□□□□□ -0.18
CUL3-209ENST00000481135 KLHL23Q8NBE8 558 aa13.92□□□□□ -0.18
CUL3-209ENST00000481135 CYP8B1Q9UNU6 501 aa13.92□□□□□ -0.18
CUL3-209ENST00000481135 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
CUL3-209ENST00000481135 SULF2Q8IWU5 870 aa13.91□□□□□ -0.18
CUL3-209ENST00000481135 DMRTC2Q8IXT2 367 aaPredicted RBP13.91□□□□□ -0.18
CUL3-209ENST00000481135 DTWD1Q8N5C7 304 aa13.91□□□□□ -0.18
CUL3-209ENST00000481135 MINDY4BA8MYZ0 360 aa13.9□□□□□ -0.18
CUL3-209ENST00000481135 CYP11A1P05108 521 aa13.9□□□□□ -0.18
CUL3-209ENST00000481135 RACK1P63244 317 aaKnown RBP13.9□□□□□ -0.18
CUL3-209ENST00000481135 HNRNPUQ00839 825 aaKnown RBP eCLIP13.9□□□□□ -0.18
CUL3-209ENST00000481135 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
CUL3-209ENST00000481135 ACBD3Q9H3P7 528 aa13.9□□□□□ -0.18
CUL3-209ENST00000481135 SPDYE3A6NKU9 549 aa13.89□□□□□ -0.19
CUL3-209ENST00000481135 PAGE1O75459 146 aa13.89□□□□□ -0.19
CUL3-209ENST00000481135 ARNTP27540 789 aa13.89□□□□□ -0.19
CUL3-209ENST00000481135 LCE2AQ5TA79 106 aaPredicted RBP13.89□□□□□ -0.19
CUL3-209ENST00000481135 AGMOQ6ZNB7 445 aa13.89□□□□□ -0.19
CUL3-209ENST00000481135 PHC3Q8NDX5 983 aa13.89□□□□□ -0.19
CUL3-209ENST00000481135 CBX8Q9HC52 389 aa13.89□□□□□ -0.19
CUL3-209ENST00000481135 INPP5FQ9Y2H2 1132 aa13.89□□□□□ -0.19
CUL3-209ENST00000481135 WIPF1O43516 503 aa13.88□□□□□ -0.19
CUL3-209ENST00000481135 CAPN10Q9HC96 672 aa13.88□□□□□ -0.19
CUL3-209ENST00000481135 EIF4A3P38919 411 aaKnown RBP13.87□□□□□ -0.19
CUL3-209ENST00000481135 SUZ12Q15022 739 aaKnown RBP13.87□□□□□ -0.19
CUL3-209ENST00000481135 SPON2Q9BUD6 331 aa13.87□□□□□ -0.19
CUL3-209ENST00000481135 F6X3S4 739 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 BMP6P22004 513 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 RAC1P63000 192 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 LMNB2Q03252 620 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 COL9A3Q14050 684 aaPredicted RBP13.86□□□□□ -0.19
CUL3-209ENST00000481135 SCARA3Q6AZY7 606 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 LLGL2Q6P1M3 1020 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 KIAA0825Q8IV33 1275 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 CORO1BQ9BR76 489 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 CARD10Q9BWT7 1032 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 MKL2Q9ULH7 1088 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 TLR6Q9Y2C9 796 aa13.86□□□□□ -0.19
CUL3-209ENST00000481135 ARHGEF15O94989 841 aa13.85□□□□□ -0.19
CUL3-209ENST00000481135 SETDB1Q15047 1291 aa13.85□□□□□ -0.19
CUL3-209ENST00000481135 RHOVQ96L33 236 aa13.85□□□□□ -0.19
CUL3-209ENST00000481135 CAMK2GQ13555 558 aaPredicted RBP13.84□□□□□ -0.19
CUL3-209ENST00000481135 POU4F3Q15319 338 aa13.84□□□□□ -0.19
CUL3-209ENST00000481135 SNAP47Q5SQN1 464 aa13.84□□□□□ -0.19
CUL3-209ENST00000481135 HP1BP3Q5SSJ5 553 aaPredicted RBP13.84□□□□□ -0.19
CUL3-209ENST00000481135 VPS37DQ86XT2 251 aa13.84□□□□□ -0.19
CUL3-209ENST00000481135 MIR1-1HGQ9H1L0 117 aa13.84□□□□□ -0.19
CUL3-209ENST00000481135 SUPT16HQ9Y5B9 1047 aaKnown RBP13.84□□□□□ -0.19
CUL3-209ENST00000481135 GNB5O14775 395 aa13.83□□□□□ -0.2
CUL3-209ENST00000481135 PF4P02776 101 aa13.83□□□□□ -0.2
CUL3-209ENST00000481135 GSTP1P09211 210 aaKnown RBP13.83□□□□□ -0.2
CUL3-209ENST00000481135 HOXB4P17483 251 aaPredicted RBP13.83□□□□□ -0.2
CUL3-209ENST00000481135 HGSNATQ68CP4 663 aa13.83□□□□□ -0.2
CUL3-209ENST00000481135 ILDR2Q71H61 639 aa13.83□□□□□ -0.2
CUL3-209ENST00000481135 PODNQ7Z5L7 613 aa13.83□□□□□ -0.2
CUL3-209ENST00000481135 CCDC84Q86UT8 332 aaPredicted RBP13.83□□□□□ -0.2
CUL3-209ENST00000481135 TRIM42Q8IWZ5 723 aa13.83□□□□□ -0.2
CUL3-209ENST00000481135 SLC43A3Q8NBI5 491 aa13.83□□□□□ -0.2
CUL3-209ENST00000481135 KLHDC7BQ96G42 594 aa13.83□□□□□ -0.2
CUL3-209ENST00000481135 TFE3P19532 575 aaPredicted RBP13.82□□□□□ -0.2
CUL3-209ENST00000481135 ZNF296Q8WUU4 475 aaPredicted RBP13.82□□□□□ -0.2
CUL3-209ENST00000481135 SPATA32Q96LK8 384 aa13.82□□□□□ -0.2
CUL3-209ENST00000481135 ADAMTS1Q9UHI8 967 aa13.82□□□□□ -0.2
CUL3-209ENST00000481135 CD68P34810 354 aaPredicted RBP13.81□□□□□ -0.2
CUL3-209ENST00000481135 PAK2Q13177 524 aa13.81□□□□□ -0.2
CUL3-209ENST00000481135 SF3A1Q15459 793 aaKnown RBP13.81□□□□□ -0.2
CUL3-209ENST00000481135 TINF2Q9BSI4 451 aa13.81□□□□□ -0.2
CUL3-209ENST00000481135 FAM160A1Q05DH4 1040 aa13.8□□□□□ -0.2
CUL3-209ENST00000481135 FBXO11Q86XK2 927 aa13.8□□□□□ -0.2
CUL3-209ENST00000481135 GOLM1Q8NBJ4 401 aa13.8□□□□□ -0.2
CUL3-209ENST00000481135 STK35Q8TDR2 534 aa13.8□□□□□ -0.2
CUL3-209ENST00000481135 KCNB2Q92953 911 aa13.8□□□□□ -0.2
CUL3-209ENST00000481135 KCNQ5Q9NR82 932 aa13.8□□□□□ -0.2
CUL3-209ENST00000481135 NOP53Q9NZM5 478 aaKnown RBP13.8□□□□□ -0.2
CUL3-209ENST00000481135 A0A0A0MRY4 1105 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 TRIM37O94972 964 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 MAOBP27338 520 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 TNNI2P48788 182 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 NLRP12P59046 1061 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 SNRPNP63162 240 aaKnown RBP13.79□□□□□ -0.2
CUL3-209ENST00000481135 ZNF252P-AS1Q0IIN9 211 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 TRIM28Q13263 835 aaKnown RBP13.79□□□□□ -0.2
CUL3-209ENST00000481135 MAP1SQ66K74 1059 aaPredicted RBP13.79□□□□□ -0.2
CUL3-209ENST00000481135 FBXL19Q6PCT2 694 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 LINC00114Q6XXX2 140 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 ZSCAN1Q8NBB4 408 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 SREK1Q8WXA9 508 aaKnown RBP13.79□□□□□ -0.2
CUL3-209ENST00000481135 GPRASP2Q96D09 838 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 PLVAPQ9BX97 442 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 USP26Q9BXU7 913 aa13.79□□□□□ -0.2
CUL3-209ENST00000481135 GJA8P48165 433 aa13.78□□□□□ -0.2
CUL3-209ENST00000481135 PDZD3Q86UT5 571 aa13.78□□□□□ -0.2
CUL3-209ENST00000481135 FMR1NBQ8N0W7 255 aaPredicted RBP13.78□□□□□ -0.2
CUL3-209ENST00000481135 GALNT11Q8NCW6 608 aa13.78□□□□□ -0.2
CUL3-209ENST00000481135 GRIN3AQ8TCU5 1115 aa13.78□□□□□ -0.2
CUL3-209ENST00000481135 TRIM11Q96F44 468 aa13.78□□□□□ -0.2
CUL3-209ENST00000481135 NT5C1AQ9BXI3 368 aa13.78□□□□□ -0.2
CUL3-209ENST00000481135 KRT82Q9NSB4 513 aa13.78□□□□□ -0.2
CUL3-209ENST00000481135 ROBO2Q9HCK4 1378 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms