RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 MS4A4AQ96JQ5 239 aa16.78■□□□□ 0.28
PTPN7-212ENST00000480836 ELP3Q9H9T3 547 aa16.78■□□□□ 0.28
PTPN7-212ENST00000480836 SERPINA10Q9UK55 444 aa16.78■□□□□ 0.28
PTPN7-212ENST00000480836 MANSC4A6NHS7 340 aaPredicted RBP16.77■□□□□ 0.28
PTPN7-212ENST00000480836 MYO1BO43795 1136 aa16.77■□□□□ 0.28
PTPN7-212ENST00000480836 PPP1R12BO60237 982 aaPredicted RBP16.77■□□□□ 0.28
PTPN7-212ENST00000480836 PDE8BO95263 885 aa16.77■□□□□ 0.28
PTPN7-212ENST00000480836 FGFR2P21802 821 aa16.77■□□□□ 0.28
PTPN7-212ENST00000480836 OTOFQ9HC10 1997 aa16.77■□□□□ 0.27
PTPN7-212ENST00000480836 MROH5Q6ZUA9 1318 aa16.76■□□□□ 0.27
PTPN7-212ENST00000480836 TESPA1A2RU30 521 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-212ENST00000480836 ZBTB48P10074 688 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-212ENST00000480836 METTL24Q5JXM2 366 aa16.76■□□□□ 0.27
PTPN7-212ENST00000480836 FBXO46Q6PJ61 603 aaPredicted RBP16.76■□□□□ 0.27
PTPN7-212ENST00000480836 LAMB1P07942 1786 aa16.75■□□□□ 0.27
PTPN7-212ENST00000480836 CRHR2Q13324 411 aa16.75■□□□□ 0.27
PTPN7-212ENST00000480836 PKN2Q16513 984 aaKnown RBP16.75■□□□□ 0.27
PTPN7-212ENST00000480836 APOBEC3HQ6NTF7 200 aaKnown RBP16.75■□□□□ 0.27
PTPN7-212ENST00000480836 OTOP1Q7RTM1 612 aa16.75■□□□□ 0.27
PTPN7-212ENST00000480836 ATG9AQ7Z3C6 839 aa16.75■□□□□ 0.27
PTPN7-212ENST00000480836 ANKRD13AQ8IZ07 590 aa16.75■□□□□ 0.27
PTPN7-212ENST00000480836 TRMT2AQ8IZ69 625 aaKnown RBP16.75■□□□□ 0.27
PTPN7-212ENST00000480836 IREB2P48200 963 aaKnown RBP16.74■□□□□ 0.27
PTPN7-212ENST00000480836 INHBEP58166 350 aa16.74■□□□□ 0.27
PTPN7-212ENST00000480836 OPTNQ96CV9 577 aa16.74■□□□□ 0.27
PTPN7-212ENST00000480836 PTPRCP08575 1304 aa16.73■□□□□ 0.27
PTPN7-212ENST00000480836 VGLL4Q14135 290 aa16.73■□□□□ 0.27
PTPN7-212ENST00000480836 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTPN7-212ENST00000480836 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
PTPN7-212ENST00000480836 BRI3BPQ8WY22 251 aa16.73■□□□□ 0.27
PTPN7-212ENST00000480836 TRIM17Q9Y577 477 aa16.73■□□□□ 0.27
PTPN7-212ENST00000480836 ARAP2Q8WZ64 1704 aa16.73■□□□□ 0.27
PTPN7-212ENST00000480836 POTEFA5A3E0 1075 aa16.72■□□□□ 0.27
PTPN7-212ENST00000480836 UNCXA6NJT0 531 aa16.72■□□□□ 0.27
PTPN7-212ENST00000480836 E9PSI1 815 aa16.72■□□□□ 0.27
PTPN7-212ENST00000480836 ALDH1A1P00352 501 aa16.72■□□□□ 0.27
PTPN7-212ENST00000480836 FAM43AQ8N2R8 423 aa16.72■□□□□ 0.27
PTPN7-212ENST00000480836 EYA2O00167 538 aa16.71■□□□□ 0.27
PTPN7-212ENST00000480836 MAP3K9P80192 1104 aa16.71■□□□□ 0.27
PTPN7-212ENST00000480836 HDLBPQ00341 1268 aaKnown RBP16.71■□□□□ 0.27
PTPN7-212ENST00000480836 CAVIN4Q5BKX8 364 aa16.7■□□□□ 0.26
PTPN7-212ENST00000480836 VPS37DQ86XT2 251 aa16.7■□□□□ 0.26
PTPN7-212ENST00000480836 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-212ENST00000480836 ZDHHC15Q96MV8 337 aa16.7■□□□□ 0.26
PTPN7-212ENST00000480836 PTPN22Q9Y2R2 807 aa16.7■□□□□ 0.26
PTPN7-212ENST00000480836 SNCAIPQ9Y6H5 919 aa16.7■□□□□ 0.26
PTPN7-212ENST00000480836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-212ENST00000480836 TNFAIP1Q13829 316 aa16.69■□□□□ 0.26
PTPN7-212ENST00000480836 DIXDC1Q155Q3 683 aa16.69■□□□□ 0.26
PTPN7-212ENST00000480836 MIGA2Q7L4E1 593 aa16.69■□□□□ 0.26
PTPN7-212ENST00000480836 TEKT1Q969V4 418 aa16.69■□□□□ 0.26
PTPN7-212ENST00000480836 MRIQ9BWK5 157 aa16.69■□□□□ 0.26
PTPN7-212ENST00000480836 NOB1Q9ULX3 412 aaKnown RBP16.69■□□□□ 0.26
PTPN7-212ENST00000480836 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
PTPN7-212ENST00000480836 PDE4DIPQ5VU43 2346 aa16.68■□□□□ 0.26
PTPN7-212ENST00000480836 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
PTPN7-212ENST00000480836 SLURP2P0DP57 97 aa16.68■□□□□ 0.26
PTPN7-212ENST00000480836 PUM3Q15397 648 aaKnown RBP16.68■□□□□ 0.26
PTPN7-212ENST00000480836 ZFPM1Q8IX07 1006 aa16.68■□□□□ 0.26
PTPN7-212ENST00000480836 OTUD5Q96G74 571 aa16.68■□□□□ 0.26
PTPN7-212ENST00000480836 SIL1Q9H173 461 aa16.68■□□□□ 0.26
PTPN7-212ENST00000480836 CCL15-CCL14A0A0B4J2E2 113 aa16.67■□□□□ 0.26
PTPN7-212ENST00000480836 SP3Q02447 781 aa16.67■□□□□ 0.26
PTPN7-212ENST00000480836 NFIAQ12857 509 aa16.67■□□□□ 0.26
PTPN7-212ENST00000480836 CCL15Q16663 113 aa16.67■□□□□ 0.26
PTPN7-212ENST00000480836 ALDH1L2Q3SY69 923 aa16.67■□□□□ 0.26
PTPN7-212ENST00000480836 HHIPL2Q6UWX4 724 aa16.67■□□□□ 0.26
PTPN7-212ENST00000480836 TBC1D22AQ8WUA7 517 aa16.67■□□□□ 0.26
PTPN7-212ENST00000480836 ARHGAP39Q9C0H5 1083 aa16.67■□□□□ 0.26
PTPN7-212ENST00000480836 TNNQ9UQP3 1299 aa16.67■□□□□ 0.26
PTPN7-212ENST00000480836 ZSWIM8A7E2V4 1837 aa16.67■□□□□ 0.26
PTPN7-212ENST00000480836 SPDYE5A6NIY4 337 aa16.66■□□□□ 0.26
PTPN7-212ENST00000480836 IRF6O14896 467 aa16.66■□□□□ 0.26
PTPN7-212ENST00000480836 IFIT1P09914 478 aaKnown RBP16.66■□□□□ 0.26
PTPN7-212ENST00000480836 PRDX5P30044 214 aa16.66■□□□□ 0.26
PTPN7-212ENST00000480836 ADORA1P30542 326 aa16.66■□□□□ 0.26
PTPN7-212ENST00000480836 INPP5BP32019 993 aa16.66■□□□□ 0.26
PTPN7-212ENST00000480836 TNNI2P48788 182 aa16.66■□□□□ 0.26
PTPN7-212ENST00000480836 CDC42EP5Q6NZY7 148 aa16.66■□□□□ 0.26
PTPN7-212ENST00000480836 LPIN2Q92539 896 aa16.66■□□□□ 0.26
PTPN7-212ENST00000480836 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
PTPN7-212ENST00000480836 DAGLAQ9Y4D2 1042 aa16.66■□□□□ 0.26
PTPN7-212ENST00000480836 LRRFIP2Q9Y608 721 aaKnown RBP16.66■□□□□ 0.26
PTPN7-212ENST00000480836 HTTP42858 3142 aa16.65■□□□□ 0.26
PTPN7-212ENST00000480836 PHKA1P46020 1223 aa16.65■□□□□ 0.26
PTPN7-212ENST00000480836 TCP10Q12799 353 aa16.65■□□□□ 0.26
PTPN7-212ENST00000480836 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
PTPN7-212ENST00000480836 MEIS3Q99687 375 aa16.65■□□□□ 0.26
PTPN7-212ENST00000480836 FAM198AQ9UFP1 575 aa16.65■□□□□ 0.26
PTPN7-212ENST00000480836 KIF16BQ96L93 1317 aa16.65■□□□□ 0.26
PTPN7-212ENST00000480836 BTBD19C9JJ37 291 aa16.64■□□□□ 0.25
PTPN7-212ENST00000480836 EN2P19622 333 aaPredicted RBP16.64■□□□□ 0.25
PTPN7-212ENST00000480836 CTGFP29279 349 aa16.64■□□□□ 0.25
PTPN7-212ENST00000480836 ERO1AQ96HE7 468 aa16.64■□□□□ 0.25
PTPN7-212ENST00000480836 WRNIP1Q96S55 665 aa16.64■□□□□ 0.25
PTPN7-212ENST00000480836 EFCC1Q9HA90 598 aa16.64■□□□□ 0.25
PTPN7-212ENST00000480836 ECM2O94769 699 aaPredicted RBP16.63■□□□□ 0.25
PTPN7-212ENST00000480836 SLC5A1P13866 664 aa16.63■□□□□ 0.25
PTPN7-212ENST00000480836 GTF2A2P52657 109 aa16.63■□□□□ 0.25
PTPN7-212ENST00000480836 TIMM10P62072 90 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms