RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SRGAP3O43295 1099 aa14.2□□□□□ -0.14
CCM2-213ENST00000480658 TRIM27P14373 513 aa14.2□□□□□ -0.14
CCM2-213ENST00000480658 NOM1Q5C9Z4 860 aaKnown RBP14.2□□□□□ -0.14
CCM2-213ENST00000480658 HHIPL2Q6UWX4 724 aa14.2□□□□□ -0.14
CCM2-213ENST00000480658 SLF2Q8IX21 1173 aa14.2□□□□□ -0.14
CCM2-213ENST00000480658 DZIP1LQ8IYY4 767 aaKnown RBP14.2□□□□□ -0.14
CCM2-213ENST00000480658 KLHDC4Q8TBB5 520 aa14.2□□□□□ -0.14
CCM2-213ENST00000480658 FRAT1Q92837 279 aaPredicted RBP14.2□□□□□ -0.14
CCM2-213ENST00000480658 PRMT6Q96LA8 375 aaPredicted RBP14.2□□□□□ -0.14
CCM2-213ENST00000480658 ZDHHC15Q96MV8 337 aa14.2□□□□□ -0.14
CCM2-213ENST00000480658 DENND2AQ9ULE3 1009 aa14.2□□□□□ -0.14
CCM2-213ENST00000480658 ANGEL1Q9UNK9 670 aaKnown RBP14.2□□□□□ -0.14
CCM2-213ENST00000480658 RPAP1Q9BWH6 1393 aaPredicted RBP14.2□□□□□ -0.14
CCM2-213ENST00000480658 SALL1Q9NSC2 1324 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 CLRN2A0PK11 232 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 MANSC4A6NHS7 340 aaPredicted RBP14.19□□□□□ -0.14
CCM2-213ENST00000480658 UBE2Q2LH0YL09 131 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 MS4A1P11836 297 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 CHAF1AQ13111 956 aaPredicted RBP14.19□□□□□ -0.14
CCM2-213ENST00000480658 LDLRAD1Q5T700 205 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 OTUD7BQ6GQQ9 843 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 DLK2Q6UY11 383 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 ATG9AQ7Z3C6 839 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 FAM83AQ86UY5 434 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 ANKRD13AQ8IZ07 590 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 MEIS3Q99687 375 aa14.19□□□□□ -0.14
CCM2-213ENST00000480658 AKAP11Q9UKA4 1901 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 MYH13Q9UKX3 1938 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 TM4SF4P48230 202 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 BCAMP50895 628 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 RASA3Q14644 834 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 MVPQ14764 893 aaKnown RBP14.18□□□□□ -0.14
CCM2-213ENST00000480658 SLC10A4Q96EP9 437 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 CSRNP1Q96S65 589 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 CFHR5Q9BXR6 569 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 SIL1Q9H173 461 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 RNF186Q9NXI6 227 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 ZNF70Q9UC06 446 aaPredicted RBP14.18□□□□□ -0.14
CCM2-213ENST00000480658 JAG2Q9Y219 1238 aa14.18□□□□□ -0.14
CCM2-213ENST00000480658 IGSF3O75054 1194 aa14.17□□□□□ -0.14
CCM2-213ENST00000480658 PKN2Q16513 984 aaKnown RBP14.17□□□□□ -0.14
CCM2-213ENST00000480658 PRAMEF18Q5VWM3 479 aa14.17□□□□□ -0.14
CCM2-213ENST00000480658 SPTY2D1Q68D10 685 aaPredicted RBP14.17□□□□□ -0.14
CCM2-213ENST00000480658 MIER1Q8N108 512 aa14.17□□□□□ -0.14
CCM2-213ENST00000480658 LAMB1P07942 1786 aa14.17□□□□□ -0.14
CCM2-213ENST00000480658 WDHD1O75717 1129 aaPredicted RBP14.16□□□□□ -0.14
CCM2-213ENST00000480658 TRPA1O75762 1119 aa14.16□□□□□ -0.14
CCM2-213ENST00000480658 LDHBP07195 334 aaKnown RBP14.16□□□□□ -0.14
CCM2-213ENST00000480658 SPRYD7Q5W111 196 aa14.16□□□□□ -0.14
CCM2-213ENST00000480658 DCAF15Q66K64 600 aa14.16□□□□□ -0.14
CCM2-213ENST00000480658 ABHD8Q96I13 439 aa14.16□□□□□ -0.14
CCM2-213ENST00000480658 CHMP4BQ9H444 224 aaKnown RBP14.16□□□□□ -0.14
CCM2-213ENST00000480658 CSADQ9Y600 493 aa14.16□□□□□ -0.14
CCM2-213ENST00000480658 SSC5DA1L4H1 1573 aa14.15□□□□□ -0.14
CCM2-213ENST00000480658 CAPN15O75808 1086 aa14.15□□□□□ -0.14
CCM2-213ENST00000480658 TDRD3Q9H7E2 651 aaKnown RBP14.15□□□□□ -0.14
CCM2-213ENST00000480658 SCAF8Q9UPN6 1271 aaKnown RBP14.15□□□□□ -0.14
CCM2-213ENST00000480658 IQSEC3Q9UPP2 1182 aaPredicted RBP14.15□□□□□ -0.14
CCM2-213ENST00000480658 BCAR3O75815 825 aa14.14□□□□□ -0.15
CCM2-213ENST00000480658 G3BP1Q13283 466 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCM2-213ENST00000480658 PRKG1Q13976 671 aa14.14□□□□□ -0.15
CCM2-213ENST00000480658 MOB2Q70IA6 237 aa14.14□□□□□ -0.15
CCM2-213ENST00000480658 ZIC5Q96T25 663 aa14.14□□□□□ -0.15
CCM2-213ENST00000480658 TSKSQ9UJT2 592 aa14.14□□□□□ -0.15
CCM2-213ENST00000480658 TCP10L2B9ZVM9 353 aa14.13□□□□□ -0.15
CCM2-213ENST00000480658 MAP4K4O95819 1239 aaPredicted RBP14.13□□□□□ -0.15
CCM2-213ENST00000480658 DGKZQ13574 1117 aa14.13□□□□□ -0.15
CCM2-213ENST00000480658 GORABQ5T7V8 394 aa14.13□□□□□ -0.15
CCM2-213ENST00000480658 NBPF12Q5TAG4 269 aaPredicted RBP14.13□□□□□ -0.15
CCM2-213ENST00000480658 CCDC102BQ68D86 513 aa14.13□□□□□ -0.15
CCM2-213ENST00000480658 DZIP1Q86YF9 867 aaKnown RBP14.13□□□□□ -0.15
CCM2-213ENST00000480658 WNK4Q96J92 1243 aa14.13□□□□□ -0.15
CCM2-213ENST00000480658 A0A1B0GUL7 405 aa14.12□□□□□ -0.15
CCM2-213ENST00000480658 UQCRFS1P1P0C7P4 283 aa14.12□□□□□ -0.15
CCM2-213ENST00000480658 GSTO1P78417 241 aa14.12□□□□□ -0.15
CCM2-213ENST00000480658 APOBEC3HQ6NTF7 200 aaKnown RBP14.12□□□□□ -0.15
CCM2-213ENST00000480658 CTU1Q7Z7A3 348 aaKnown RBP14.12□□□□□ -0.15
CCM2-213ENST00000480658 CLUAP1Q96AJ1 413 aa14.12□□□□□ -0.15
CCM2-213ENST00000480658 TEPSINQ96N21 525 aa14.12□□□□□ -0.15
CCM2-213ENST00000480658 MCOLN1Q9GZU1 580 aa14.12□□□□□ -0.15
CCM2-213ENST00000480658 GPR108Q9NPR9 543 aa14.12□□□□□ -0.15
CCM2-213ENST00000480658 USP2O75604 605 aaPredicted RBP14.11□□□□□ -0.15
CCM2-213ENST00000480658 GTF2A2P52657 109 aa14.11□□□□□ -0.15
CCM2-213ENST00000480658 MAP3K9P80192 1104 aa14.11□□□□□ -0.15
CCM2-213ENST00000480658 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
CCM2-213ENST00000480658 TMEM57Q8N5G2 664 aa14.11□□□□□ -0.15
CCM2-213ENST00000480658 FAM151AQ8WW52 585 aa14.11□□□□□ -0.15
CCM2-213ENST00000480658 TMEM39BQ9GZU3 492 aa14.11□□□□□ -0.15
CCM2-213ENST00000480658 PA2G4Q9UQ80 394 aaKnown RBP14.11□□□□□ -0.15
CCM2-213ENST00000480658 PCDHAC2Q9Y5I4 1007 aa14.11□□□□□ -0.15
CCM2-213ENST00000480658 PHKA1P46020 1223 aa14.1□□□□□ -0.15
CCM2-213ENST00000480658 TFCP2Q12800 502 aa14.1□□□□□ -0.15
CCM2-213ENST00000480658 OS9Q13438 667 aaPredicted RBP14.1□□□□□ -0.15
CCM2-213ENST00000480658 ARHGEF6Q15052 776 aa14.1□□□□□ -0.15
CCM2-213ENST00000480658 TMED8Q6PL24 325 aaPredicted RBP14.1□□□□□ -0.15
CCM2-213ENST00000480658 IFNL1Q8IU54 200 aa14.1□□□□□ -0.15
CCM2-213ENST00000480658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCM2-213ENST00000480658 XAGE2Q96GT9 111 aa14.1□□□□□ -0.15
CCM2-213ENST00000480658 ZNF341Q9BYN7 854 aa14.1□□□□□ -0.15
CCM2-213ENST00000480658 ZCCHC17Q9NP64 241 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms