RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, human

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFEMP1-211	ENST00000480016	PRMT2	P55345	433 aa		10.84	□□□□□ -0.67
EFEMP1-211	ENST00000480016	LSM11	P83369	360 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
EFEMP1-211	ENST00000480016	SMAD3	P84022	425 aa	Known RBP	10.84	□□□□□ -0.67
EFEMP1-211	ENST00000480016	UIMC1	Q96RL1	719 aa		10.84	□□□□□ -0.67
EFEMP1-211	ENST00000480016	RSPH6A	Q9H0K4	717 aa		10.84	□□□□□ -0.67
EFEMP1-211	ENST00000480016	UNC93B1	Q9H1C4	597 aa		10.84	□□□□□ -0.67
EFEMP1-211	ENST00000480016	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.84	□□□□□ -0.67
EFEMP1-211	ENST00000480016	HTATSF1	O43719	755 aa	Known RBP	10.83	□□□□□ -0.68
EFEMP1-211	ENST00000480016	TTLL12	Q14166	644 aa	Predicted RBP	10.83	□□□□□ -0.68
EFEMP1-211	ENST00000480016	AKNAD1	Q5T1N1	836 aa		10.83	□□□□□ -0.68
EFEMP1-211	ENST00000480016	LDLRAD1	Q5T700	205 aa		10.83	□□□□□ -0.68
EFEMP1-211	ENST00000480016	PRAMEF18	Q5VWM3	479 aa		10.83	□□□□□ -0.68
EFEMP1-211	ENST00000480016	PHACTR3	Q96KR7	559 aa		10.83	□□□□□ -0.68
EFEMP1-211	ENST00000480016	PNN	Q9H307	717 aa	Known RBP	10.83	□□□□□ -0.68
EFEMP1-211	ENST00000480016	ZSWIM8	A7E2V4	1837 aa		10.83	□□□□□ -0.68
EFEMP1-211	ENST00000480016	UBR2	Q8IWV8	1755 aa		10.82	□□□□□ -0.68
EFEMP1-211	ENST00000480016	CEMIP	Q8WUJ3	1361 aa		10.82	□□□□□ -0.68
EFEMP1-211	ENST00000480016	YDJC	A8MPS7	323 aa		10.82	□□□□□ -0.68
EFEMP1-211	ENST00000480016	KCNQ1	P51787	676 aa		10.82	□□□□□ -0.68
EFEMP1-211	ENST00000480016	OTUD7B	Q6GQQ9	843 aa		10.82	□□□□□ -0.68
EFEMP1-211	ENST00000480016	LARP6	Q9BRS8	491 aa	Known RBP	10.82	□□□□□ -0.68
EFEMP1-211	ENST00000480016	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.82	□□□□□ -0.68
EFEMP1-211	ENST00000480016	GNRH1	P01148	92 aa		10.81	□□□□□ -0.68
EFEMP1-211	ENST00000480016	SNRPA1	P09661	255 aa	Known RBP	10.81	□□□□□ -0.68
EFEMP1-211	ENST00000480016	ID4	P47928	161 aa		10.81	□□□□□ -0.68
EFEMP1-211	ENST00000480016	ANGEL2	Q5VTE6	544 aa	Known RBP	10.81	□□□□□ -0.68
EFEMP1-211	ENST00000480016	DDX27	Q96GQ7	796 aa	Known RBP	10.81	□□□□□ -0.68
EFEMP1-211	ENST00000480016	TBC1D2B	Q9UPU7	963 aa		10.81	□□□□□ -0.68
EFEMP1-211	ENST00000480016	RIPOR2	Q9Y4F9	1068 aa		10.81	□□□□□ -0.68
EFEMP1-211	ENST00000480016	NAV2	Q8IVL1	2488 aa		10.8	□□□□□ -0.68
EFEMP1-211	ENST00000480016	A1BG	P04217	495 aa		10.8	□□□□□ -0.68
EFEMP1-211	ENST00000480016	TFF2	Q03403	129 aa		10.8	□□□□□ -0.68
EFEMP1-211	ENST00000480016	MFSD10	Q14728	455 aa		10.8	□□□□□ -0.68
EFEMP1-211	ENST00000480016	KIF4B	Q2VIQ3	1234 aa		10.8	□□□□□ -0.68
EFEMP1-211	ENST00000480016	DZIP3	Q86Y13	1208 aa	Known RBP	10.8	□□□□□ -0.68
EFEMP1-211	ENST00000480016	ANKS1A	Q92625	1134 aa		10.8	□□□□□ -0.68
EFEMP1-211	ENST00000480016	ZNF652	Q9Y2D9	606 aa		10.8	□□□□□ -0.68
EFEMP1-211	ENST00000480016	XIRP2	A4UGR9	3374 aa		10.8	□□□□□ -0.68
EFEMP1-211	ENST00000480016	TAF1	P21675	1872 aa		10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	UBXN2A	P68543	259 aa		10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	PDE3A	Q14432	1141 aa		10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	SHH	Q15465	462 aa		10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	TAF7	Q15545	349 aa	Predicted RBP	10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	CCDC85B	Q15834	202 aa	Predicted RBP	10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	MCM10	Q7L590	875 aa		10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	PNISR	Q8TF01	805 aa	Known RBP	10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	RNF166	Q96A37	237 aa	Predicted RBP	10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	DEFB118	Q96PH6	123 aa		10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	SCAF8	Q9UPN6	1271 aa	Known RBP	10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	SIPA1L3	O60292	1781 aa	Predicted RBP	10.79	□□□□□ -0.68
EFEMP1-211	ENST00000480016	FAM208B	Q5VWN6	2430 aa		10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	TESPA1	A2RU30	521 aa	Predicted RBP	10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	ARHGAP33	O14559	1287 aa		10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	ZBTB48	P10074	688 aa	Predicted RBP	10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	LACTB	P83111	547 aa	Predicted RBP	10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	PPP4R3B	Q5MIZ7	849 aa		10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	CLEC4G	Q6UXB4	293 aa		10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	TRIM47	Q96LD4	638 aa		10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	CD320	Q9NPF0	282 aa		10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	BIN2	Q9UBW5	565 aa	Predicted RBP	10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	SRRD	Q9UH36	339 aa		10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	RIF1	Q5UIP0	2472 aa	Known RBP	10.78	□□□□□ -0.68
EFEMP1-211	ENST00000480016	MAP1B	P46821	2468 aa	Known RBP	10.77	□□□□□ -0.69
EFEMP1-211	ENST00000480016	KCNQ3	O43525	872 aa		10.77	□□□□□ -0.69
EFEMP1-211	ENST00000480016	CAMTA2	O94983	1202 aa		10.77	□□□□□ -0.69
EFEMP1-211	ENST00000480016	SCARF1	Q14162	830 aa		10.77	□□□□□ -0.69
EFEMP1-211	ENST00000480016	USP16	Q9Y5T5	823 aa		10.77	□□□□□ -0.69
EFEMP1-211	ENST00000480016	MAPK8IP3	Q9UPT6	1336 aa		10.77	□□□□□ -0.69
EFEMP1-211	ENST00000480016	LAMB1	P07942	1786 aa		10.77	□□□□□ -0.69
EFEMP1-211	ENST00000480016	PSMD14	O00487	310 aa		10.76	□□□□□ -0.69
EFEMP1-211	ENST00000480016	CTGF	P29279	349 aa		10.76	□□□□□ -0.69
EFEMP1-211	ENST00000480016	DCTN1	Q14203	1278 aa		10.76	□□□□□ -0.69
EFEMP1-211	ENST00000480016	C9orf50	Q5SZB4	431 aa		10.76	□□□□□ -0.69
EFEMP1-211	ENST00000480016	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.76	□□□□□ -0.69
EFEMP1-211	ENST00000480016	SLC10A4	Q96EP9	437 aa		10.76	□□□□□ -0.69
EFEMP1-211	ENST00000480016	WNK4	Q96J92	1243 aa		10.76	□□□□□ -0.69
EFEMP1-211	ENST00000480016	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.76	□□□□□ -0.69
EFEMP1-211	ENST00000480016	RIC1	Q4ADV7	1423 aa		10.75	□□□□□ -0.69
EFEMP1-211	ENST00000480016	KIAA2012	Q0VF49	1180 aa		10.75	□□□□□ -0.69
EFEMP1-211	ENST00000480016	KIF22	Q14807	665 aa		10.75	□□□□□ -0.69
EFEMP1-211	ENST00000480016	TPTE2	Q6XPS3	522 aa		10.75	□□□□□ -0.69
EFEMP1-211	ENST00000480016	RAET1E	Q8TD07	263 aa		10.75	□□□□□ -0.69
EFEMP1-211	ENST00000480016	NBPF3	Q9H094	633 aa		10.75	□□□□□ -0.69
EFEMP1-211	ENST00000480016	SCN7A	Q01118	1682 aa		10.75	□□□□□ -0.69
EFEMP1-211	ENST00000480016	MYO9B	Q13459	2157 aa		10.75	□□□□□ -0.69
EFEMP1-211	ENST00000480016	ASH1L	Q9NR48	2969 aa	Known RBP	10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	TCERG1	O14776	1098 aa	Known RBP	10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	TLL1	O43897	1013 aa		10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	GTF2E1	P29083	439 aa	Predicted RBP	10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	PRKG1	Q13976	671 aa		10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	RALBP1	Q15311	655 aa		10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	NFE2L2	Q16236	605 aa		10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	AAK1	Q2M2I8	961 aa		10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	CRY2	Q49AN0	593 aa		10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	TPRN	Q4KMQ1	711 aa		10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	ARMC9	Q7Z3E5	817 aa		10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	LURAP1L	Q8IV03	231 aa		10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	ZFYVE28	Q9HCC9	887 aa		10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	PAK6	Q9NQU5	681 aa	Predicted RBP	10.74	□□□□□ -0.69
EFEMP1-211	ENST00000480016	USP24	Q9UPU5	2620 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms