RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 AOX1Q06278 1338 aa16.77■□□□□ 0.28
ABCF1-206ENST00000479542 CRKP46108 304 aa16.77■□□□□ 0.28
ABCF1-206ENST00000479542 GYG1P46976 350 aa16.77■□□□□ 0.28
ABCF1-206ENST00000479542 MAP3K9P80192 1104 aa16.77■□□□□ 0.28
ABCF1-206ENST00000479542 SP3Q02447 781 aa16.77■□□□□ 0.28
ABCF1-206ENST00000479542 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.77■□□□□ 0.28
ABCF1-206ENST00000479542 ARMC5Q96C12 935 aa16.77■□□□□ 0.28
ABCF1-206ENST00000479542 SUCLG2Q96I99 432 aa16.77■□□□□ 0.28
ABCF1-206ENST00000479542 ZCCHC17Q9NP64 241 aaKnown RBP16.77■□□□□ 0.28
ABCF1-206ENST00000479542 HTTP42858 3142 aa16.76■□□□□ 0.27
ABCF1-206ENST00000479542 ZNF521Q96K83 1311 aa16.76■□□□□ 0.27
ABCF1-206ENST00000479542 NBPF7P0C2Y1 421 aaPredicted RBP16.76■□□□□ 0.27
ABCF1-206ENST00000479542 GTF2A2P52657 109 aa16.76■□□□□ 0.27
ABCF1-206ENST00000479542 CRHR2Q13324 411 aa16.76■□□□□ 0.27
ABCF1-206ENST00000479542 CAVIN4Q5BKX8 364 aa16.76■□□□□ 0.27
ABCF1-206ENST00000479542 FAM83AQ86UY5 434 aa16.76■□□□□ 0.27
ABCF1-206ENST00000479542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.76■□□□□ 0.272e-6■■□□□ 12.8
ABCF1-206ENST00000479542 HOOK2Q96ED9 719 aa16.76■□□□□ 0.27
ABCF1-206ENST00000479542 TDRD3Q9H7E2 651 aaKnown RBP16.76■□□□□ 0.27
ABCF1-206ENST00000479542 PTPRCP08575 1304 aa16.75■□□□□ 0.27
ABCF1-206ENST00000479542 ZBTB22O15209 634 aa16.75■□□□□ 0.27
ABCF1-206ENST00000479542 PDE8BO95263 885 aa16.75■□□□□ 0.27
ABCF1-206ENST00000479542 SLC4A10Q6U841 1118 aa16.75■□□□□ 0.27
ABCF1-206ENST00000479542 VGLL2Q8N8G2 317 aa16.75■□□□□ 0.27
ABCF1-206ENST00000479542 OPTNQ96CV9 577 aa16.75■□□□□ 0.27
ABCF1-206ENST00000479542 ZDHHC15Q96MV8 337 aa16.75■□□□□ 0.27
ABCF1-206ENST00000479542 PUS3Q9BZE2 481 aaKnown RBP16.75■□□□□ 0.27
ABCF1-206ENST00000479542 EFCC1Q9HA90 598 aa16.75■□□□□ 0.27
ABCF1-206ENST00000479542 SALL2Q9Y467 1007 aaPredicted RBP16.75■□□□□ 0.27
ABCF1-206ENST00000479542 ARAP2Q8WZ64 1704 aa16.74■□□□□ 0.27
ABCF1-206ENST00000479542 VPS37DQ86XT2 251 aa16.74■□□□□ 0.27
ABCF1-206ENST00000479542 ZFYVE28Q9HCC9 887 aa16.74■□□□□ 0.27
ABCF1-206ENST00000479542 MAST3O60307 1309 aa16.73■□□□□ 0.27
ABCF1-206ENST00000479542 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
ABCF1-206ENST00000479542 TEKT1Q969V4 418 aa16.73■□□□□ 0.27
ABCF1-206ENST00000479542 BICC1Q9H694 974 aaKnown RBP16.73■□□□□ 0.27
ABCF1-206ENST00000479542 JAG2Q9Y219 1238 aa16.73■□□□□ 0.27
ABCF1-206ENST00000479542 CSADQ9Y600 493 aa16.73■□□□□ 0.27
ABCF1-206ENST00000479542 RBBP6Q7Z6E9 1792 aaKnown RBP16.72■□□□□ 0.27
ABCF1-206ENST00000479542 SPDYE5A6NIY4 337 aa16.72■□□□□ 0.27
ABCF1-206ENST00000479542 GNRH1P01148 92 aa16.72■□□□□ 0.27
ABCF1-206ENST00000479542 FGFR2P21802 821 aa16.72■□□□□ 0.27
ABCF1-206ENST00000479542 VGLL4Q14135 290 aa16.72■□□□□ 0.27
ABCF1-206ENST00000479542 MRPL50Q8N5N7 158 aaKnown RBP16.72■□□□□ 0.27
ABCF1-206ENST00000479542 ANKRD44Q8N8A2 993 aa16.72■□□□□ 0.27
ABCF1-206ENST00000479542 CD99L2Q8TCZ2 262 aa16.72■□□□□ 0.27
ABCF1-206ENST00000479542 BRI3BPQ8WY22 251 aa16.72■□□□□ 0.27
ABCF1-206ENST00000479542 TMEM39BQ9GZU3 492 aa16.72■□□□□ 0.27
ABCF1-206ENST00000479542 ELP3Q9H9T3 547 aa16.72■□□□□ 0.27
ABCF1-206ENST00000479542 MKI67P46013 3256 aaKnown RBP16.72■□□□□ 0.27
ABCF1-206ENST00000479542 CENPFP49454 3210 aa16.71■□□□□ 0.27
ABCF1-206ENST00000479542 TCP10L2B9ZVM9 353 aa16.71■□□□□ 0.27
ABCF1-206ENST00000479542 WDHD1O75717 1129 aaPredicted RBP16.71■□□□□ 0.27
ABCF1-206ENST00000479542 LRRC24Q50LG9 513 aa16.71■□□□□ 0.27
ABCF1-206ENST00000479542 METTL24Q5JXM2 366 aa16.71■□□□□ 0.27
ABCF1-206ENST00000479542 ERO1BQ86YB8 467 aa16.71■□□□□ 0.27
ABCF1-206ENST00000479542 FBXO3Q9UK99 471 aa16.71■□□□□ 0.27
ABCF1-206ENST00000479542 RPAP1Q9BWH6 1393 aaPredicted RBP16.71■□□□□ 0.27
ABCF1-206ENST00000479542 KIAA0100Q14667 2235 aaKnown RBP16.7■□□□□ 0.26
ABCF1-206ENST00000479542 IFIT1P09914 478 aaKnown RBP16.7■□□□□ 0.26
ABCF1-206ENST00000479542 CETPP11597 493 aa16.7■□□□□ 0.26
ABCF1-206ENST00000479542 APOBEC3HQ6NTF7 200 aaKnown RBP16.7■□□□□ 0.26
ABCF1-206ENST00000479542 NBPF11Q86T75 865 aa16.7■□□□□ 0.26
ABCF1-206ENST00000479542 USP44Q9H0E7 712 aa16.7■□□□□ 0.26
ABCF1-206ENST00000479542 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
ABCF1-206ENST00000479542 OTOFQ9HC10 1997 aa16.69■□□□□ 0.26
ABCF1-206ENST00000479542 CCL15-CCL14A0A0B4J2E2 113 aa16.69■□□□□ 0.26
ABCF1-206ENST00000479542 POTEFA5A3E0 1075 aa16.69■□□□□ 0.26
ABCF1-206ENST00000479542 TLR2O60603 784 aa16.69■□□□□ 0.26
ABCF1-206ENST00000479542 FRAT2O75474 233 aaPredicted RBP16.69■□□□□ 0.26
ABCF1-206ENST00000479542 PRMT2P55345 433 aa16.69■□□□□ 0.26
ABCF1-206ENST00000479542 PUM3Q15397 648 aaKnown RBP16.69■□□□□ 0.26
ABCF1-206ENST00000479542 TAF1CQ15572 869 aaPredicted RBP16.69■□□□□ 0.26
ABCF1-206ENST00000479542 GRIK5Q16478 980 aa16.69■□□□□ 0.26
ABCF1-206ENST00000479542 CCL15Q16663 113 aa16.69■□□□□ 0.26
ABCF1-206ENST00000479542 DCAF15Q66K64 600 aa16.69■□□□□ 0.26
ABCF1-206ENST00000479542 WDR66Q8TBY9 1149 aa16.69■□□□□ 0.26
ABCF1-206ENST00000479542 BRCA2P51587 3418 aa16.68■□□□□ 0.26
ABCF1-206ENST00000479542 E9PSI1 815 aa16.68■□□□□ 0.26
ABCF1-206ENST00000479542 PPATQ06203 517 aa16.68■□□□□ 0.26
ABCF1-206ENST00000479542 PPIL2Q13356 520 aa16.68■□□□□ 0.26
ABCF1-206ENST00000479542 CDAN1Q8IWY9 1227 aa16.68■□□□□ 0.26
ABCF1-206ENST00000479542 LPIN2Q92539 896 aa16.68■□□□□ 0.26
ABCF1-206ENST00000479542 ZNF333Q96JL9 665 aa16.68■□□□□ 0.26
ABCF1-206ENST00000479542 EYA2O00167 538 aa16.67■□□□□ 0.26
ABCF1-206ENST00000479542 RFX5P48382 616 aaPredicted RBP16.67■□□□□ 0.26
ABCF1-206ENST00000479542 BCAMP50895 628 aa16.67■□□□□ 0.26
ABCF1-206ENST00000479542 CAP1Q01518 475 aa16.67■□□□□ 0.26
ABCF1-206ENST00000479542 SNAPC2Q13487 334 aa16.67■□□□□ 0.26
ABCF1-206ENST00000479542 ALDH1L2Q3SY69 923 aa16.67■□□□□ 0.26
ABCF1-206ENST00000479542 FAM43AQ8N2R8 423 aa16.67■□□□□ 0.26
ABCF1-206ENST00000479542 FAM151AQ8WW52 585 aa16.67■□□□□ 0.26
ABCF1-206ENST00000479542 TMEM106CQ9BVX2 250 aa16.67■□□□□ 0.26
ABCF1-206ENST00000479542 ZNF112Q9UJU3 913 aa16.67■□□□□ 0.26
ABCF1-206ENST00000479542 SNCAIPQ9Y6H5 919 aa16.67■□□□□ 0.26
ABCF1-206ENST00000479542 CHAF1AQ13111 956 aaPredicted RBP16.66■□□□□ 0.26
ABCF1-206ENST00000479542 FAM9BQ8IZU0 186 aa16.66■□□□□ 0.26
ABCF1-206ENST00000479542 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
ABCF1-206ENST00000479542 OTUD5Q96G74 571 aa16.66■□□□□ 0.26
ABCF1-206ENST00000479542 IRF6O14896 467 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms