RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 NRG1Q02297 640 aaPredicted RBP9.25□□□□□ -0.93
CCDC58-204ENST00000479414 PPP2R3AQ06190 1150 aa9.25□□□□□ -0.93
CCDC58-204ENST00000479414 GPN3Q9UHW5 284 aaPredicted RBP9.25□□□□□ -0.93
CCDC58-204ENST00000479414 USP31Q70CQ4 1352 aa9.24□□□□□ -0.93
CCDC58-204ENST00000479414 VAMP1P23763 118 aa9.24□□□□□ -0.93
CCDC58-204ENST00000479414 ST13P50502 369 aaKnown RBP9.24□□□□□ -0.93
CCDC58-204ENST00000479414 NLRP12P59046 1061 aa9.24□□□□□ -0.93
CCDC58-204ENST00000479414 TPTE2Q6XPS3 522 aa9.24□□□□□ -0.93
CCDC58-204ENST00000479414 TMEM130Q8N3G9 435 aa9.24□□□□□ -0.93
CCDC58-204ENST00000479414 TTF2Q9UNY4 1162 aaKnown RBP9.24□□□□□ -0.93
CCDC58-204ENST00000479414 ENC1O14682 589 aa9.23□□□□□ -0.93
CCDC58-204ENST00000479414 CYP11A1P05108 521 aa9.23□□□□□ -0.93
CCDC58-204ENST00000479414 ZNF157P51786 506 aaPredicted RBP9.23□□□□□ -0.93
CCDC58-204ENST00000479414 AP3B2Q13367 1082 aa9.23□□□□□ -0.93
CCDC58-204ENST00000479414 TAF1CQ15572 869 aaPredicted RBP9.23□□□□□ -0.93
CCDC58-204ENST00000479414 MEI1Q5TIA1 1274 aa9.23□□□□□ -0.93
CCDC58-204ENST00000479414 SV2BQ7L1I2 683 aa9.23□□□□□ -0.93
CCDC58-204ENST00000479414 CD163Q86VB7 1156 aa9.23□□□□□ -0.93
CCDC58-204ENST00000479414 LOC100289279A0A1B0GTE1 492 aa9.22□□□□□ -0.93
CCDC58-204ENST00000479414 FBXO24O75426 580 aa9.22□□□□□ -0.93
CCDC58-204ENST00000479414 WISP1O95388 367 aa9.22□□□□□ -0.93
CCDC58-204ENST00000479414 CHRNA4P43681 627 aa9.22□□□□□ -0.93
CCDC58-204ENST00000479414 ADGRE1Q14246 886 aa9.22□□□□□ -0.93
CCDC58-204ENST00000479414 DUOXA2Q1HG44 320 aa9.22□□□□□ -0.93
CCDC58-204ENST00000479414 KIAA1211Q6ZU35 1233 aa9.22□□□□□ -0.93
CCDC58-204ENST00000479414 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.22□□□□□ -0.93
CCDC58-204ENST00000479414 UBASH3BQ8TF42 649 aa9.22□□□□□ -0.93
CCDC58-204ENST00000479414 F8W735 103 aaPredicted RBP9.21□□□□□ -0.94
CCDC58-204ENST00000479414 RBM25P49756 843 aaKnown RBP9.21□□□□□ -0.94
CCDC58-204ENST00000479414 MBTPS1Q14703 1052 aa9.21□□□□□ -0.94
CCDC58-204ENST00000479414 POU4F3Q15319 338 aa9.21□□□□□ -0.94
CCDC58-204ENST00000479414 LDLRAD1Q5T700 205 aa9.21□□□□□ -0.94
CCDC58-204ENST00000479414 USP26Q9BXU7 913 aa9.21□□□□□ -0.94
CCDC58-204ENST00000479414 USP21Q9UK80 565 aa9.21□□□□□ -0.94
CCDC58-204ENST00000479414 C1QTNF9BB2RNN3 333 aa9.2□□□□□ -0.94
CCDC58-204ENST00000479414 ITGB2P05107 769 aa9.2□□□□□ -0.94
CCDC58-204ENST00000479414 NME2P22392 152 aa9.2□□□□□ -0.94
CCDC58-204ENST00000479414 MAOBP27338 520 aa9.2□□□□□ -0.94
CCDC58-204ENST00000479414 ACAD11Q709F0 780 aa9.2□□□□□ -0.94
CCDC58-204ENST00000479414 NOC4LQ9BVI4 516 aaKnown RBP9.2□□□□□ -0.94
CCDC58-204ENST00000479414 KIAA1522Q9P206 1035 aaPredicted RBP9.2□□□□□ -0.94
CCDC58-204ENST00000479414 CELA3AP09093 270 aa9.19□□□□□ -0.94
CCDC58-204ENST00000479414 ARNTP27540 789 aa9.19□□□□□ -0.94
CCDC58-204ENST00000479414 CCDC85BQ15834 202 aaPredicted RBP9.19□□□□□ -0.94
CCDC58-204ENST00000479414 Q6ZS46 218 aa9.19□□□□□ -0.94
CCDC58-204ENST00000479414 SULF2Q8IWU5 870 aa9.19□□□□□ -0.94
CCDC58-204ENST00000479414 MRRFQ96E11 262 aaKnown RBP9.19□□□□□ -0.94
CCDC58-204ENST00000479414 CORO1BQ9BR76 489 aa9.19□□□□□ -0.94
CCDC58-204ENST00000479414 AKTIPQ9H8T0 292 aa9.19□□□□□ -0.94
CCDC58-204ENST00000479414 SAMM50Q9Y512 469 aa9.19□□□□□ -0.94
CCDC58-204ENST00000479414 MEGF11A6BM72 1044 aa9.18□□□□□ -0.94
CCDC58-204ENST00000479414 PAGE1O75459 146 aa9.18□□□□□ -0.94
CCDC58-204ENST00000479414 DLGAP3O95886 979 aa9.18□□□□□ -0.94
CCDC58-204ENST00000479414 PLA2G4EQ3MJ16 856 aa9.18□□□□□ -0.94
CCDC58-204ENST00000479414 HP1BP3Q5SSJ5 553 aaPredicted RBP9.18□□□□□ -0.94
CCDC58-204ENST00000479414 PDZD3Q86UT5 571 aa9.18□□□□□ -0.94
CCDC58-204ENST00000479414 STK35Q8TDR2 534 aa9.18□□□□□ -0.94
CCDC58-204ENST00000479414 WFDC12Q8WWY7 111 aa9.18□□□□□ -0.94
CCDC58-204ENST00000479414 BACH2Q9BYV9 841 aa9.18□□□□□ -0.94
CCDC58-204ENST00000479414 ECEL1O95672 775 aa9.17□□□□□ -0.94
CCDC58-204ENST00000479414 RECKO95980 971 aa9.17□□□□□ -0.94
CCDC58-204ENST00000479414 CTSBP07858 339 aa9.17□□□□□ -0.94
CCDC58-204ENST00000479414 GSTP1P09211 210 aaKnown RBP9.17□□□□□ -0.94
CCDC58-204ENST00000479414 BMP6P22004 513 aa9.17□□□□□ -0.94
CCDC58-204ENST00000479414 NOS3P29474 1203 aa9.17□□□□□ -0.94
CCDC58-204ENST00000479414 TXNRD3Q86VQ6 643 aa9.17□□□□□ -0.94
CCDC58-204ENST00000479414 RUSC1Q9BVN2 902 aa9.17□□□□□ -0.94
CCDC58-204ENST00000479414 EMILIN2Q9BXX0 1053 aa9.17□□□□□ -0.94
CCDC58-204ENST00000479414 TMPRSS13Q9BYE2 586 aa9.17□□□□□ -0.94
CCDC58-204ENST00000479414 RNF208Q9H0X6 261 aa9.17□□□□□ -0.94
CCDC58-204ENST00000479414 ZNF252P-AS1Q0IIN9 211 aa9.16□□□□□ -0.94
CCDC58-204ENST00000479414 PCNX4Q63HM2 1172 aa9.16□□□□□ -0.94
CCDC58-204ENST00000479414 AGGF1Q8N302 714 aaeCLIP9.16□□□□□ -0.94
CCDC58-204ENST00000479414 KRT82Q9NSB4 513 aa9.16□□□□□ -0.94
CCDC58-204ENST00000479414 ALX3O95076 343 aa9.15□□□□□ -0.94
CCDC58-204ENST00000479414 RLBP1P12271 317 aa9.15□□□□□ -0.94
CCDC58-204ENST00000479414 IREB2P48200 963 aaKnown RBP9.15□□□□□ -0.94
CCDC58-204ENST00000479414 EXOSC6Q5RKV6 272 aaKnown RBP9.15□□□□□ -0.94
CCDC58-204ENST00000479414 SCARA3Q6AZY7 606 aa9.15□□□□□ -0.94
CCDC58-204ENST00000479414 SUGCTQ9HAC7 445 aa9.15□□□□□ -0.94
CCDC58-204ENST00000479414 SYNGAP1Q96PV0 1343 aa9.14□□□□□ -0.95
CCDC58-204ENST00000479414 RPS26P62854 115 aaKnown RBP9.14□□□□□ -0.95
CCDC58-204ENST00000479414 TSNAXIP1Q2TAA8 658 aa9.14□□□□□ -0.95
CCDC58-204ENST00000479414 TMEM87AQ8NBN3 555 aa9.14□□□□□ -0.95
CCDC58-204ENST00000479414 SMG8Q8ND04 991 aaKnown RBP9.14□□□□□ -0.95
CCDC58-204ENST00000479414 CCDC86Q9H6F5 360 aaKnown RBP9.14□□□□□ -0.95
CCDC58-204ENST00000479414 CACNA2D2Q9NY47 1150 aa9.14□□□□□ -0.95
CCDC58-204ENST00000479414 CYP8B1Q9UNU6 501 aa9.14□□□□□ -0.95
CCDC58-204ENST00000479414 GATA4P43694 442 aa9.13□□□□□ -0.95
CCDC58-204ENST00000479414 LIG3P49916 1009 aa9.13□□□□□ -0.95
CCDC58-204ENST00000479414 LRRC14Q15048 493 aa9.13□□□□□ -0.95
CCDC58-204ENST00000479414 RASIP1Q5U651 963 aa9.13□□□□□ -0.95
CCDC58-204ENST00000479414 ANKRD34AQ69YU3 496 aa9.13□□□□□ -0.95
CCDC58-204ENST00000479414 TTBK2Q6IQ55 1244 aa9.13□□□□□ -0.95
CCDC58-204ENST00000479414 SSBP4Q9BWG4 385 aaPredicted RBP9.13□□□□□ -0.95
CCDC58-204ENST00000479414 CEP41Q9BYV8 373 aa9.13□□□□□ -0.95
CCDC58-204ENST00000479414 PDE3AQ14432 1141 aa9.12□□□□□ -0.95
CCDC58-204ENST00000479414 NUTM2GQ5VZR2 741 aa9.12□□□□□ -0.95
CCDC58-204ENST00000479414 LLGL2Q6P1M3 1020 aa9.12□□□□□ -0.95
CCDC58-204ENST00000479414 AGMOQ6ZNB7 445 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms