RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 CFAP100Q494V2 611 aa30.54■■■□□ 2.48
PERM1-203ENST00000479361 TEKT1Q969V4 418 aa30.54■■■□□ 2.48
PERM1-203ENST00000479361 SNRKQ9NRH2 765 aa30.54■■■□□ 2.48
PERM1-203ENST00000479361 WNT10BO00744 389 aa30.53■■■□□ 2.48
PERM1-203ENST00000479361 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.53■■■□□ 2.48
PERM1-203ENST00000479361 CRKP46108 304 aa30.52■■■□□ 2.48
PERM1-203ENST00000479361 MAP1SQ66K74 1059 aaPredicted RBP30.52■■■□□ 2.48
PERM1-203ENST00000479361 ERICH6Q7L0X2 663 aa30.52■■■□□ 2.48
PERM1-203ENST00000479361 MYO1BO43795 1136 aa30.51■■■□□ 2.47
PERM1-203ENST00000479361 ATP5JP18859 108 aa30.51■■■□□ 2.47
PERM1-203ENST00000479361 ZAP70P43403 619 aa30.51■■■□□ 2.47
PERM1-203ENST00000479361 C1QTNF8P60827 252 aa30.51■■■□□ 2.47
PERM1-203ENST00000479361 NBPF9Q3BBW0 867 aa30.51■■■□□ 2.47
PERM1-203ENST00000479361 DZIP1Q86YF9 867 aaKnown RBP30.51■■■□□ 2.47
PERM1-203ENST00000479361 CNTROBQ8N137 903 aa30.51■■■□□ 2.47
PERM1-203ENST00000479361 DCPSQ96C86 337 aaKnown RBP30.51■■■□□ 2.47
PERM1-203ENST00000479361 SPDYE2BA6NHP3 402 aa30.5■■■□□ 2.47
PERM1-203ENST00000479361 SPDYE6P0CI01 402 aa30.5■■■□□ 2.47
PERM1-203ENST00000479361 SLF2Q8IX21 1173 aa30.5■■■□□ 2.47
PERM1-203ENST00000479361 ZBED3Q96IU2 234 aaPredicted RBP30.5■■■□□ 2.47
PERM1-203ENST00000479361 ECHDC1Q9NTX5 307 aa30.5■■■□□ 2.47
PERM1-203ENST00000479361 GGA3Q9NZ52 723 aa30.5■■■□□ 2.47
PERM1-203ENST00000479361 LRP2BPQ9P2M1 347 aa30.5■■■□□ 2.47
PERM1-203ENST00000479361 IGSF3O75054 1194 aa30.49■■■□□ 2.47
PERM1-203ENST00000479361 CYP2E1P05181 493 aaPredicted RBP30.49■■■□□ 2.47
PERM1-203ENST00000479361 HHIPL2Q6UWX4 724 aa30.49■■■□□ 2.47
PERM1-203ENST00000479361 TBC1D9Q6ZT07 1266 aa30.49■■■□□ 2.47
PERM1-203ENST00000479361 PITPNM2Q9BZ72 1349 aa30.48■■■□□ 2.47
PERM1-203ENST00000479361 AKAP11Q9UKA4 1901 aa30.48■■■□□ 2.47
PERM1-203ENST00000479361 ANGEL2Q5VTE6 544 aaKnown RBP30.48■■■□□ 2.47
PERM1-203ENST00000479361 B4GALNT3Q6L9W6 998 aa30.48■■■□□ 2.47
PERM1-203ENST00000479361 ZDHHC15Q96MV8 337 aa30.48■■■□□ 2.47
PERM1-203ENST00000479361 CDC37L1Q7L3B6 337 aa30.47■■■□□ 2.47
PERM1-203ENST00000479361 PRMT6Q96LA8 375 aaPredicted RBP30.47■■■□□ 2.47
PERM1-203ENST00000479361 RAI14Q9P0K7 980 aa30.47■■■□□ 2.47
PERM1-203ENST00000479361 GSTO1P78417 241 aa30.46■■■□□ 2.47
PERM1-203ENST00000479361 NUCB1Q02818 461 aa30.46■■■□□ 2.47
PERM1-203ENST00000479361 TTF1Q15361 905 aaPredicted RBP30.46■■■□□ 2.47
PERM1-203ENST00000479361 SULF1Q8IWU6 871 aa30.46■■■□□ 2.47
PERM1-203ENST00000479361 ASTN2O75129 1339 aaPredicted RBP30.46■■■□□ 2.47
PERM1-203ENST00000479361 TTC41PQ6P2S7 1318 aa30.46■■■□□ 2.47
PERM1-203ENST00000479361 MECOMQ03112 1051 aa30.45■■■□□ 2.47
PERM1-203ENST00000479361 KRT26Q7Z3Y9 468 aa30.45■■■□□ 2.47
PERM1-203ENST00000479361 CHD1LQ86WJ1 897 aa30.45■■■□□ 2.47
PERM1-203ENST00000479361 DNAJC2Q99543 621 aaKnown RBP30.45■■■□□ 2.47
PERM1-203ENST00000479361 BOLA2Q9H3K6 86 aa30.45■■■□□ 2.47
PERM1-203ENST00000479361 PCDHAC2Q9Y5I4 1007 aa30.45■■■□□ 2.47
PERM1-203ENST00000479361 ITGBL1O95965 494 aaPredicted RBP30.44■■■□□ 2.46
PERM1-203ENST00000479361 DIXDC1Q155Q3 683 aa30.44■■■□□ 2.46
PERM1-203ENST00000479361 APOBEC3FQ8IUX4 373 aaKnown RBP30.44■■■□□ 2.46
PERM1-203ENST00000479361 HAUS7Q99871 368 aa30.44■■■□□ 2.46
PERM1-203ENST00000479361 LNPKQ9C0E8 428 aa30.44■■■□□ 2.46
PERM1-203ENST00000479361 ERC2O15083 957 aa30.43■■■□□ 2.46
PERM1-203ENST00000479361 MX1P20591 662 aa30.43■■■□□ 2.46
PERM1-203ENST00000479361 PIH1D3Q9NQM4 214 aaKnown RBP30.43■■■□□ 2.46
PERM1-203ENST00000479361 NDUFB9Q9Y6M9 179 aa30.43■■■□□ 2.46
PERM1-203ENST00000479361 LDHCP07864 332 aa30.42■■■□□ 2.46
PERM1-203ENST00000479361 NSUN4Q96CB9 384 aaKnown RBP30.42■■■□□ 2.46
PERM1-203ENST00000479361 FAM163AQ96GL9 167 aaPredicted RBP30.42■■■□□ 2.46
PERM1-203ENST00000479361 GLIS2Q9BZE0 524 aaPredicted RBP30.42■■■□□ 2.46
PERM1-203ENST00000479361 DAGLAQ9Y4D2 1042 aa30.42■■■□□ 2.46
PERM1-203ENST00000479361 GOLIM4O00461 696 aa30.41■■■□□ 2.46
PERM1-203ENST00000479361 IDH1O75874 414 aaKnown RBP30.41■■■□□ 2.46
PERM1-203ENST00000479361 MAP3K12Q12852 859 aa30.41■■■□□ 2.46
PERM1-203ENST00000479361 APOBEC3HQ6NTF7 200 aaKnown RBP30.41■■■□□ 2.46
PERM1-203ENST00000479361 USP48Q86UV5 1035 aa30.41■■■□□ 2.46
PERM1-203ENST00000479361 OTUD7AQ8TE49 926 aaPredicted RBP30.41■■■□□ 2.46
PERM1-203ENST00000479361 PAG1Q9NWQ8 432 aa30.41■■■□□ 2.46
PERM1-203ENST00000479361 GAKO14976 1311 aa30.41■■■□□ 2.46
PERM1-203ENST00000479361 CLRN2A0PK11 232 aa30.4■■■□□ 2.46
PERM1-203ENST00000479361 SPDYE2Q495Y8 402 aa30.4■■■□□ 2.46
PERM1-203ENST00000479361 TMED8Q6PL24 325 aaPredicted RBP30.4■■■□□ 2.46
PERM1-203ENST00000479361 ANTXR1Q9H6X2 564 aa30.4■■■□□ 2.46
PERM1-203ENST00000479361 TDRD3Q9H7E2 651 aaKnown RBP30.4■■■□□ 2.46
PERM1-203ENST00000479361 GLRX3O76003 335 aaKnown RBP30.39■■■□□ 2.46
PERM1-203ENST00000479361 NAA16Q6N069 864 aaPredicted RBP30.39■■■□□ 2.46
PERM1-203ENST00000479361 VEZTQ9HBM0 779 aa30.39■■■□□ 2.46
PERM1-203ENST00000479361 TMOD2Q9NZR1 351 aa30.39■■■□□ 2.46
PERM1-203ENST00000479361 ZNF70Q9UC06 446 aaPredicted RBP30.39■■■□□ 2.46
PERM1-203ENST00000479361 MROH7-TTC4A0A0A0MT08 1334 aa30.39■■■□□ 2.46
PERM1-203ENST00000479361 PASKQ96RG2 1323 aa30.39■■■□□ 2.46
PERM1-203ENST00000479361 SALL3Q9BXA9 1300 aa30.39■■■□□ 2.46
PERM1-203ENST00000479361 TSHZ3Q63HK5 1081 aa30.38■■■□□ 2.45
PERM1-203ENST00000479361 ZNF384Q8TF68 577 aa30.38■■■□□ 2.45
PERM1-203ENST00000479361 STAP2Q9UGK3 403 aa30.38■■■□□ 2.45
PERM1-203ENST00000479361 ADM5C9JUS6 153 aa30.37■■■□□ 2.45
PERM1-203ENST00000479361 TRAF5O00463 557 aa30.37■■■□□ 2.45
PERM1-203ENST00000479361 TNFAIP1Q13829 316 aa30.37■■■□□ 2.45
PERM1-203ENST00000479361 ECM29Q5VYK3 1845 aa30.37■■■□□ 2.45
PERM1-203ENST00000479361 ERICH6BQ5W0A0 696 aa30.36■■■□□ 2.45
PERM1-203ENST00000479361 PI4K2BQ8TCG2 481 aa30.36■■■□□ 2.45
PERM1-203ENST00000479361 NOL10Q9BSC4 688 aaKnown RBP30.36■■■□□ 2.45
PERM1-203ENST00000479361 AOX1Q06278 1338 aa30.36■■■□□ 2.45
PERM1-203ENST00000479361 PDE1AP54750 535 aa30.35■■■□□ 2.45
PERM1-203ENST00000479361 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.35■■■□□ 2.45
PERM1-203ENST00000479361 PPP2R3BQ9Y5P8 575 aa30.35■■■□□ 2.45
PERM1-203ENST00000479361 MAST2Q6P0Q8 1798 aa30.35■■■□□ 2.45
PERM1-203ENST00000479361 MYH2Q9UKX2 1941 aa30.35■■■□□ 2.45
PERM1-203ENST00000479361 GPR75-ASB3A0A0A6YYF3 556 aa30.34■■■□□ 2.45
PERM1-203ENST00000479361 BTDP43251 543 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms