RNA–Protein interactions for RNA: ENST00000478997.3

RN7SL549P-201, Transcript of RNA, 7SL, cytoplasmic 549, pseudogene, humanhuman

BASIC

Gene RN7SL549P, Length 282 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL549P-201ENST00000478997 PCDHAC2Q9Y5I4 1007 aa9.48□□□□□ -0.89
RN7SL549P-201ENST00000478997 AOX1Q06278 1338 aa9.48□□□□□ -0.89
RN7SL549P-201ENST00000478997 LAMB1P07942 1786 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 PNMA6EA0A0J9YXQ4 647 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 ZBTB7BO15156 539 aaPredicted RBP9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 MS4A1P11836 297 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 GRM1Q13255 1194 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 TNFAIP1Q13829 316 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 LDLRAD1Q5T700 205 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 PRAMEF18Q5VWM3 479 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 REM2Q8IYK8 340 aaPredicted RBP9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 SSH3Q8TE77 659 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 TEKT1Q969V4 418 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 ZDHHC15Q96MV8 337 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 BEGAINQ9BUH8 593 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 SCAF8Q9UPN6 1271 aaKnown RBP9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 AKAP2Q9Y2D5 859 aa9.47□□□□□ -0.89
RN7SL549P-201ENST00000478997 A0A1B0GUL7 405 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 CLRN2A0PK11 232 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 PHKA1P46020 1223 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 RBM5P52756 815 aaKnown RBP eCLIP9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 ATP8B2P98198 1209 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 TFCP2Q12800 502 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 MVPQ14764 893 aaKnown RBP9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 SUPT20HL1Q3ZLR7 823 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 FKBP1CQ5VVH2 108 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 CCDC102BQ68D86 513 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 HHIPL2Q6UWX4 724 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 MOB2Q70IA6 237 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 ARMC9Q7Z3E5 817 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 ITPRIPQ8IWB1 547 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 ZIC5Q96T25 663 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 VEZTQ9HBM0 779 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 GPR108Q9NPR9 543 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 SAGE1Q9NXZ1 904 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 ZNF70Q9UC06 446 aaPredicted RBP9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 DENND2AQ9ULE3 1009 aa9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 RPAP1Q9BWH6 1393 aaPredicted RBP9.46□□□□□ -0.9
RN7SL549P-201ENST00000478997 AKAP11Q9UKA4 1901 aa9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 UBE2Q2LH0YL09 131 aa9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 ADORA1P30542 326 aa9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 TNNI2P48788 182 aa9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 LBX1P52954 281 aa9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 KIF23Q02241 960 aaPredicted RBP9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 RASA3Q14644 834 aa9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 APOBEC3HQ6NTF7 200 aaKnown RBP9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 ZGPATQ8N5A5 531 aaKnown RBP9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 XAGE2Q96GT9 111 aa9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 TDRD3Q9H7E2 651 aaKnown RBP9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 NOP58Q9Y2X3 529 aaKnown RBP9.45□□□□□ -0.9
RN7SL549P-201ENST00000478997 OTOFQ9HC10 1997 aa9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 PPP1R12BO60237 982 aaPredicted RBP9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 PRDX5P30044 214 aa9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 TIMM10P62072 90 aa9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 G3BP1Q13283 466 aaKnown RBP eCLIP9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 RASGRF1Q13972 1273 aa9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 TTLL12Q14166 644 aaPredicted RBP9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 NBPF12Q5TAG4 269 aaPredicted RBP9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 FAM83AQ86UY5 434 aa9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 TNS4Q8IZW8 715 aa9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 TEPSINQ96N21 525 aa9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 CSRNP1Q96S65 589 aa9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 RCAN3Q9UKA8 241 aa9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 ANGEL1Q9UNK9 670 aaKnown RBP9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.44□□□□□ -0.9
RN7SL549P-201ENST00000478997 GAKO14976 1311 aa9.43□□□□□ -0.9
RN7SL549P-201ENST00000478997 LDHBP07195 334 aaKnown RBP9.43□□□□□ -0.9
RN7SL549P-201ENST00000478997 ARID4AP29374 1257 aaPredicted RBP9.43□□□□□ -0.9
RN7SL549P-201ENST00000478997 CEP85Q6P2H3 762 aa9.43□□□□□ -0.9
RN7SL549P-201ENST00000478997 PANK1Q8TE04 598 aa9.43□□□□□ -0.9
RN7SL549P-201ENST00000478997 C1orf115Q9H7X2 142 aa9.43□□□□□ -0.9
RN7SL549P-201ENST00000478997 TMOD2Q9NZR1 351 aa9.43□□□□□ -0.9
RN7SL549P-201ENST00000478997 DAGLAQ9Y4D2 1042 aa9.43□□□□□ -0.9
RN7SL549P-201ENST00000478997 MYH2Q9UKX2 1941 aa9.43□□□□□ -0.9
RN7SL549P-201ENST00000478997 RFX7Q2KHR2 1363 aa9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 IGSF3O75054 1194 aa9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 USP2O75604 605 aaPredicted RBP9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 ZBTB48P10074 688 aaPredicted RBP9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 IREB2P48200 963 aaKnown RBP9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 TM4SF4P48230 202 aa9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 SPRYD7Q5W111 196 aa9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 HOOK2Q96ED9 719 aa9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 FAM163AQ96GL9 167 aaPredicted RBP9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 ZNF512BQ96KM6 892 aaPredicted RBP9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 TMEM39BQ9GZU3 492 aa9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 RNF186Q9NXI6 227 aa9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 DDX19BQ9UMR2 479 aa9.42□□□□□ -0.9
RN7SL549P-201ENST00000478997 TCP10L2B9ZVM9 353 aa9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 SURF6O75683 361 aaKnown RBP9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 UQCRFS1P1P0C7P4 283 aa9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 SREBF2Q12772 1141 aa9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 PRKG1Q13976 671 aa9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 PDE3AQ14432 1141 aa9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 DIXDC1Q155Q3 683 aa9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 TNNI3KQ59H18 835 aa9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 SPTY2D1Q68D10 685 aaPredicted RBP9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 CDAN1Q8IWY9 1227 aa9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 SLF2Q8IX21 1173 aa9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 ANKRD13AQ8IZ07 590 aa9.41□□□□□ -0.9
RN7SL549P-201ENST00000478997 SPATA5Q8NB90 893 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms