RNA–Protein interactions for RNA: ENST00000478681.1

COL4A2-205, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-205ENST00000478681 CHAF1AQ13111 956 aaPredicted RBP16.35■□□□□ 0.21
COL4A2-205ENST00000478681 SPRYD7Q5W111 196 aa16.35■□□□□ 0.21
COL4A2-205ENST00000478681 MEIS3Q99687 375 aa16.35■□□□□ 0.21
COL4A2-205ENST00000478681 TDRD3Q9H7E2 651 aaKnown RBP16.35■□□□□ 0.21
COL4A2-205ENST00000478681 LRRFIP2Q9Y608 721 aaKnown RBP16.35■□□□□ 0.21
COL4A2-205ENST00000478681 USP2O75604 605 aaPredicted RBP16.34■□□□□ 0.21
COL4A2-205ENST00000478681 SLC5A1P13866 664 aa16.34■□□□□ 0.21
COL4A2-205ENST00000478681 DGKZQ13574 1117 aa16.34■□□□□ 0.21
COL4A2-205ENST00000478681 TNFAIP1Q13829 316 aa16.34■□□□□ 0.21
COL4A2-205ENST00000478681 SLC10A4Q96EP9 437 aa16.34■□□□□ 0.21
COL4A2-205ENST00000478681 TEPSINQ96N21 525 aa16.34■□□□□ 0.21
COL4A2-205ENST00000478681 COPRSQ9NQ92 184 aa16.34■□□□□ 0.21
COL4A2-205ENST00000478681 ZBTB22O15209 634 aa16.33■□□□□ 0.2
COL4A2-205ENST00000478681 SREBF2Q12772 1141 aa16.33■□□□□ 0.2
COL4A2-205ENST00000478681 CLMNQ96JQ2 1002 aa16.33■□□□□ 0.2
COL4A2-205ENST00000478681 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
COL4A2-205ENST00000478681 CFHR5Q9BXR6 569 aa16.33■□□□□ 0.2
COL4A2-205ENST00000478681 SIL1Q9H173 461 aa16.33■□□□□ 0.2
COL4A2-205ENST00000478681 CEP126Q9P2H0 1117 aa16.33■□□□□ 0.2
COL4A2-205ENST00000478681 MYH13Q9UKX3 1938 aa16.33■□□□□ 0.2
COL4A2-205ENST00000478681 IPO8O15397 1037 aaKnown RBP16.32■□□□□ 0.2
COL4A2-205ENST00000478681 LAMB1P07942 1786 aa16.32■□□□□ 0.2
COL4A2-205ENST00000478681 GNAI3P08754 354 aa16.32■□□□□ 0.2
COL4A2-205ENST00000478681 ZBTB48P10074 688 aaPredicted RBP16.32■□□□□ 0.2
COL4A2-205ENST00000478681 IL15P40933 162 aaPredicted RBP16.32■□□□□ 0.2
COL4A2-205ENST00000478681 INHBEP58166 350 aa16.32■□□□□ 0.2
COL4A2-205ENST00000478681 MKRN3Q13064 507 aaKnown RBP16.32■□□□□ 0.2
COL4A2-205ENST00000478681 NOM1Q5C9Z4 860 aaKnown RBP16.32■□□□□ 0.2
COL4A2-205ENST00000478681 APOBEC3HQ6NTF7 200 aaKnown RBP16.32■□□□□ 0.2
COL4A2-205ENST00000478681 MIER1Q8N108 512 aa16.32■□□□□ 0.2
COL4A2-205ENST00000478681 WDR66Q8TBY9 1149 aa16.32■□□□□ 0.2
COL4A2-205ENST00000478681 TEKT1Q969V4 418 aa16.32■□□□□ 0.2
COL4A2-205ENST00000478681 BCAR3O75815 825 aa16.31■□□□□ 0.2
COL4A2-205ENST00000478681 TBC1D8O95759 1140 aa16.31■□□□□ 0.2
COL4A2-205ENST00000478681 TRIM27P14373 513 aa16.31■□□□□ 0.2
COL4A2-205ENST00000478681 IREB2P48200 963 aaKnown RBP16.31■□□□□ 0.2
COL4A2-205ENST00000478681 MTX1Q13505 466 aa16.31■□□□□ 0.2
COL4A2-205ENST00000478681 ATP2B3Q16720 1220 aa16.31■□□□□ 0.2
COL4A2-205ENST00000478681 FKBP1CQ5VVH2 108 aa16.31■□□□□ 0.2
COL4A2-205ENST00000478681 HHIPL2Q6UWX4 724 aa16.31■□□□□ 0.2
COL4A2-205ENST00000478681 PA2G4Q9UQ80 394 aaKnown RBP16.31■□□□□ 0.2
COL4A2-205ENST00000478681 MAST3O60307 1309 aa16.3■□□□□ 0.2
COL4A2-205ENST00000478681 MANSC4A6NHS7 340 aaPredicted RBP16.3■□□□□ 0.2
COL4A2-205ENST00000478681 CCDC85CA6NKD9 419 aa16.3■□□□□ 0.2
COL4A2-205ENST00000478681 TCP10L2B9ZVM9 353 aa16.3■□□□□ 0.2
COL4A2-205ENST00000478681 TNNI2P48788 182 aa16.3■□□□□ 0.2
COL4A2-205ENST00000478681 RGS19P49795 217 aa16.3■□□□□ 0.2
COL4A2-205ENST00000478681 ATF7IPQ6VMQ6 1270 aa16.3■□□□□ 0.2
COL4A2-205ENST00000478681 CDAN1Q8IWY9 1227 aa16.3■□□□□ 0.2
COL4A2-205ENST00000478681 ANKRD13AQ8IZ07 590 aa16.3■□□□□ 0.2
COL4A2-205ENST00000478681 WNK4Q96J92 1243 aa16.3■□□□□ 0.2
COL4A2-205ENST00000478681 TMEM39BQ9GZU3 492 aa16.3■□□□□ 0.2
COL4A2-205ENST00000478681 HTTP42858 3142 aa16.29■□□□□ 0.2
COL4A2-205ENST00000478681 CTU1Q7Z7A3 348 aaKnown RBP16.29■□□□□ 0.2
COL4A2-205ENST00000478681 FAM83AQ86UY5 434 aa16.29■□□□□ 0.2
COL4A2-205ENST00000478681 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
COL4A2-205ENST00000478681 TNRC18O15417 2968 aaPredicted RBP16.28■□□□□ 0.2
COL4A2-205ENST00000478681 GPR25O00155 361 aa16.28■□□□□ 0.2
COL4A2-205ENST00000478681 SEMA3EO15041 775 aa16.28■□□□□ 0.2
COL4A2-205ENST00000478681 ALDH1A1P00352 501 aa16.28■□□□□ 0.2
COL4A2-205ENST00000478681 GJA5P36382 358 aa16.28■□□□□ 0.2
COL4A2-205ENST00000478681 DIEXFQ68CQ4 756 aaKnown RBP16.28■□□□□ 0.2
COL4A2-205ENST00000478681 ZNF296Q8WUU4 475 aaPredicted RBP16.28■□□□□ 0.2
COL4A2-205ENST00000478681 R3HDMLQ9H3Y0 253 aa16.28■□□□□ 0.2
COL4A2-205ENST00000478681 GNL3LQ9NVN8 582 aaKnown RBP16.28■□□□□ 0.2
COL4A2-205ENST00000478681 TNNQ9UQP3 1299 aa16.28■□□□□ 0.2
COL4A2-205ENST00000478681 OTOFQ9HC10 1997 aa16.27■□□□□ 0.2
COL4A2-205ENST00000478681 SALL1Q9NSC2 1324 aa16.27■□□□□ 0.2
COL4A2-205ENST00000478681 TESPA1A2RU30 521 aaPredicted RBP16.27■□□□□ 0.2
COL4A2-205ENST00000478681 SRGAP3O43295 1099 aa16.27■□□□□ 0.2
COL4A2-205ENST00000478681 PHKA1P46020 1223 aa16.27■□□□□ 0.2
COL4A2-205ENST00000478681 CACNB3P54284 484 aa16.27■□□□□ 0.2
COL4A2-205ENST00000478681 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.27■□□□□ 0.2
COL4A2-205ENST00000478681 IFNL1Q8IU54 200 aa16.27■□□□□ 0.2
COL4A2-205ENST00000478681 CENPFP49454 3210 aa16.27■□□□□ 0.19
COL4A2-205ENST00000478681 GNAI2P04899 355 aa16.26■□□□□ 0.19
COL4A2-205ENST00000478681 ADORA1P30542 326 aa16.26■□□□□ 0.19
COL4A2-205ENST00000478681 TIMM10P62072 90 aa16.26■□□□□ 0.19
COL4A2-205ENST00000478681 MAP3K9P80192 1104 aa16.26■□□□□ 0.19
COL4A2-205ENST00000478681 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
COL4A2-205ENST00000478681 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL4A2-205ENST00000478681 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
COL4A2-205ENST00000478681 DENND2AQ9ULE3 1009 aa16.26■□□□□ 0.19
COL4A2-205ENST00000478681 IGF2BP3O00425 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL4A2-205ENST00000478681 PRDX5P30044 214 aa16.25■□□□□ 0.19
COL4A2-205ENST00000478681 HNRNPUQ00839 825 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL4A2-205ENST00000478681 PKN2Q16513 984 aaKnown RBP16.25■□□□□ 0.19
COL4A2-205ENST00000478681 TMOD2Q9NZR1 351 aa16.25■□□□□ 0.19
COL4A2-205ENST00000478681 DAGLAQ9Y4D2 1042 aa16.25■□□□□ 0.19
COL4A2-205ENST00000478681 FKTNO75072 461 aa16.24■□□□□ 0.19
COL4A2-205ENST00000478681 LDHBP07195 334 aaKnown RBP16.24■□□□□ 0.19
COL4A2-205ENST00000478681 TFCP2Q12800 502 aa16.24■□□□□ 0.19
COL4A2-205ENST00000478681 DIXDC1Q155Q3 683 aa16.24■□□□□ 0.19
COL4A2-205ENST00000478681 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
COL4A2-205ENST00000478681 CLUAP1Q96AJ1 413 aa16.24■□□□□ 0.19
COL4A2-205ENST00000478681 OPTNQ96CV9 577 aa16.24■□□□□ 0.19
COL4A2-205ENST00000478681 MS4A4AQ96JQ5 239 aa16.24■□□□□ 0.19
COL4A2-205ENST00000478681 PTPN18Q99952 460 aa16.24■□□□□ 0.19
COL4A2-205ENST00000478681 ELP3Q9H9T3 547 aa16.24■□□□□ 0.19
COL4A2-205ENST00000478681 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms