RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 TBC1D22AQ8WUA7 517 aa23.31■■□□□ 1.32
SREBF1-212ENST00000478616 TDRD3Q9H7E2 651 aaKnown RBP23.31■■□□□ 1.32
SREBF1-212ENST00000478616 ZNF70Q9UC06 446 aaPredicted RBP23.31■■□□□ 1.32
SREBF1-212ENST00000478616 MYH2Q9UKX2 1941 aa23.31■■□□□ 1.32
SREBF1-212ENST00000478616 SLC10A3P09131 477 aa23.3■■□□□ 1.32
SREBF1-212ENST00000478616 APOBEC3HQ6NTF7 200 aaKnown RBP23.3■■□□□ 1.32
SREBF1-212ENST00000478616 RASAL3Q86YV0 1011 aa23.3■■□□□ 1.32
SREBF1-212ENST00000478616 XAGE2Q96GT9 111 aa23.3■■□□□ 1.32
SREBF1-212ENST00000478616 TEPSINQ96N21 525 aa23.3■■□□□ 1.32
SREBF1-212ENST00000478616 MYO5AQ9Y4I1 1855 aaKnown RBP23.3■■□□□ 1.32
SREBF1-212ENST00000478616 FKBP1BP68106 108 aa23.29■■□□□ 1.32
SREBF1-212ENST00000478616 HDLBPQ00341 1268 aaKnown RBP23.29■■□□□ 1.32
SREBF1-212ENST00000478616 RCAN3Q9UKA8 241 aa23.29■■□□□ 1.32
SREBF1-212ENST00000478616 PRDX5P30044 214 aa23.28■■□□□ 1.32
SREBF1-212ENST00000478616 MAP2K1Q02750 393 aaPredicted RBP23.28■■□□□ 1.32
SREBF1-212ENST00000478616 RASGRF1Q13972 1273 aa23.28■■□□□ 1.32
SREBF1-212ENST00000478616 NBPF12Q5TAG4 269 aaPredicted RBP23.28■■□□□ 1.32
SREBF1-212ENST00000478616 CEP85Q6P2H3 762 aa23.28■■□□□ 1.32
SREBF1-212ENST00000478616 MRIQ9BWK5 157 aa23.28■■□□□ 1.32
SREBF1-212ENST00000478616 FRAT2O75474 233 aaPredicted RBP23.27■■□□□ 1.32
SREBF1-212ENST00000478616 ZNF157P51786 506 aaPredicted RBP23.27■■□□□ 1.32
SREBF1-212ENST00000478616 RBM5P52756 815 aaKnown RBP eCLIP23.27■■□□□ 1.322e-7■■■□□ 15
SREBF1-212ENST00000478616 RASA3Q14644 834 aa23.27■■□□□ 1.32
SREBF1-212ENST00000478616 LDLRAD1Q5T700 205 aa23.27■■□□□ 1.32
SREBF1-212ENST00000478616 C20orf194Q5TEA3 1177 aa23.27■■□□□ 1.32
SREBF1-212ENST00000478616 ZDHHC15Q96MV8 337 aa23.27■■□□□ 1.32
SREBF1-212ENST00000478616 VEZTQ9HBM0 779 aa23.27■■□□□ 1.32
SREBF1-212ENST00000478616 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.32
SREBF1-212ENST00000478616 SUGT1Q9Y2Z0 365 aa23.27■■□□□ 1.32
SREBF1-212ENST00000478616 SALL1Q9NSC2 1324 aa23.27■■□□□ 1.32
SREBF1-212ENST00000478616 LBX1P52954 281 aa23.26■■□□□ 1.31
SREBF1-212ENST00000478616 NOGQ13253 232 aa23.26■■□□□ 1.31
SREBF1-212ENST00000478616 PRKG1Q13976 671 aa23.26■■□□□ 1.31
SREBF1-212ENST00000478616 WDR66Q8TBY9 1149 aa23.26■■□□□ 1.31
SREBF1-212ENST00000478616 ZNF384Q8TF68 577 aa23.26■■□□□ 1.31
SREBF1-212ENST00000478616 CASP8AP2Q9UKL3 1982 aa23.25■■□□□ 1.31
SREBF1-212ENST00000478616 CTCFP49711 727 aaPredicted RBP23.25■■□□□ 1.31
SREBF1-212ENST00000478616 CACNB3P54284 484 aa23.25■■□□□ 1.31
SREBF1-212ENST00000478616 KIF23Q02241 960 aaPredicted RBP23.25■■□□□ 1.31
SREBF1-212ENST00000478616 DIXDC1Q155Q3 683 aa23.25■■□□□ 1.31
SREBF1-212ENST00000478616 MAP3K11Q16584 847 aa23.25■■□□□ 1.31
SREBF1-212ENST00000478616 TSKSQ9UJT2 592 aa23.25■■□□□ 1.31
SREBF1-212ENST00000478616 SEMA3EO15041 775 aa23.24■■□□□ 1.31
SREBF1-212ENST00000478616 MVPQ14764 893 aaKnown RBP23.24■■□□□ 1.31
SREBF1-212ENST00000478616 HHIPL2Q6UWX4 724 aa23.24■■□□□ 1.31
SREBF1-212ENST00000478616 PI16Q6UXB8 463 aa23.24■■□□□ 1.31
SREBF1-212ENST00000478616 SIRT2Q8IXJ6 389 aa23.24■■□□□ 1.31
SREBF1-212ENST00000478616 COG6Q9Y2V7 657 aa23.24■■□□□ 1.31
SREBF1-212ENST00000478616 DAGLAQ9Y4D2 1042 aa23.24■■□□□ 1.31
SREBF1-212ENST00000478616 PPP2R3BQ9Y5P8 575 aa23.24■■□□□ 1.31
SREBF1-212ENST00000478616 TEKT1Q969V4 418 aa23.23■■□□□ 1.31
SREBF1-212ENST00000478616 CCDC102AQ96A19 550 aa23.23■■□□□ 1.31
SREBF1-212ENST00000478616 CSRNP1Q96S65 589 aa23.23■■□□□ 1.31
SREBF1-212ENST00000478616 TMEM39BQ9GZU3 492 aa23.23■■□□□ 1.31
SREBF1-212ENST00000478616 PRDM10Q9NQV6 1147 aa23.23■■□□□ 1.31
SREBF1-212ENST00000478616 ZBTB40Q9NUA8 1239 aa23.23■■□□□ 1.31
SREBF1-212ENST00000478616 DENND2AQ9ULE3 1009 aa23.23■■□□□ 1.31
SREBF1-212ENST00000478616 PDS5AQ29RF7 1337 aaKnown RBP23.23■■□□□ 1.31
SREBF1-212ENST00000478616 TCP10L2B9ZVM9 353 aa23.22■■□□□ 1.31
SREBF1-212ENST00000478616 MYO1BO43795 1136 aa23.22■■□□□ 1.31
SREBF1-212ENST00000478616 USP2O75604 605 aaPredicted RBP23.22■■□□□ 1.31
SREBF1-212ENST00000478616 G3BP1Q13283 466 aaKnown RBP eCLIP23.22■■□□□ 1.31
SREBF1-212ENST00000478616 HMG20BQ9P0W2 317 aa23.22■■□□□ 1.31
SREBF1-212ENST00000478616 AKAP2Q9Y2D5 859 aa23.22■■□□□ 1.31
SREBF1-212ENST00000478616 SURF6O75683 361 aaKnown RBP23.21■■□□□ 1.31
SREBF1-212ENST00000478616 ARID4AP29374 1257 aaPredicted RBP23.21■■□□□ 1.31
SREBF1-212ENST00000478616 AIDAQ96BJ3 306 aa23.21■■□□□ 1.31
SREBF1-212ENST00000478616 CLMNQ96JQ2 1002 aa23.21■■□□□ 1.31
SREBF1-212ENST00000478616 NEUROD6Q96NK8 337 aa23.21■■□□□ 1.31
SREBF1-212ENST00000478616 GPR108Q9NPR9 543 aa23.21■■□□□ 1.31
SREBF1-212ENST00000478616 ANGEL1Q9UNK9 670 aaKnown RBP23.21■■□□□ 1.31
SREBF1-212ENST00000478616 MCAMP43121 646 aa23.2■■□□□ 1.3
SREBF1-212ENST00000478616 TNNI3KQ59H18 835 aa23.2■■□□□ 1.3
SREBF1-212ENST00000478616 IFFO2Q5TF58 517 aa23.2■■□□□ 1.3
SREBF1-212ENST00000478616 DBNDD2Q9BQY9 259 aa23.2■■□□□ 1.3
SREBF1-212ENST00000478616 GNL3LQ9NVN8 582 aaKnown RBP23.2■■□□□ 1.3
SREBF1-212ENST00000478616 FPGT-TNNI3KV9GXZ4 949 aa23.2■■□□□ 1.3
SREBF1-212ENST00000478616 RFX7Q2KHR2 1363 aa23.19■■□□□ 1.3
SREBF1-212ENST00000478616 GAKO14976 1311 aa23.19■■□□□ 1.3
SREBF1-212ENST00000478616 MAST3O60307 1309 aa23.19■■□□□ 1.3
SREBF1-212ENST00000478616 TTLL12Q14166 644 aaPredicted RBP23.19■■□□□ 1.3
SREBF1-212ENST00000478616 TLR7Q9NYK1 1049 aaKnown RBP23.19■■□□□ 1.3
SREBF1-212ENST00000478616 NF2P35240 595 aa23.18■■□□□ 1.3
SREBF1-212ENST00000478616 NFIAQ12857 509 aa23.18■■□□□ 1.3
SREBF1-212ENST00000478616 CDC42EP5Q6NZY7 148 aa23.18■■□□□ 1.3
SREBF1-212ENST00000478616 EAF2Q96CJ1 260 aaPredicted RBP23.18■■□□□ 1.3
SREBF1-212ENST00000478616 CDK5RAP2Q96SN8 1893 aa23.17■■□□□ 1.3
SREBF1-212ENST00000478616 LDHBP07195 334 aaKnown RBP23.17■■□□□ 1.3
SREBF1-212ENST00000478616 GJA5P36382 358 aa23.17■■□□□ 1.3
SREBF1-212ENST00000478616 FKBP1CQ5VVH2 108 aa23.17■■□□□ 1.3
SREBF1-212ENST00000478616 TBC1D9Q6ZT07 1266 aa23.17■■□□□ 1.3
SREBF1-212ENST00000478616 ARMC9Q7Z3E5 817 aa23.17■■□□□ 1.3
SREBF1-212ENST00000478616 DBNLQ9UJU6 430 aaKnown RBP23.17■■□□□ 1.3
SREBF1-212ENST00000478616 MAST2Q6P0Q8 1798 aa23.17■■□□□ 1.3
SREBF1-212ENST00000478616 RNF186Q9NXI6 227 aa23.16■■□□□ 1.3
SREBF1-212ENST00000478616 FAM198AQ9UFP1 575 aa23.16■■□□□ 1.3
SREBF1-212ENST00000478616 EXOC6BQ9Y2D4 811 aa23.16■■□□□ 1.3
SREBF1-212ENST00000478616 MKRN3Q13064 507 aaKnown RBP23.15■■□□□ 1.3
SREBF1-212ENST00000478616 TNFAIP1Q13829 316 aa23.15■■□□□ 1.3
SREBF1-212ENST00000478616 SUPT20HL1Q3ZLR7 823 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms