RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 GRAPQ13588 217 aa13.96□□□□□ -0.17
PCCB-214ENST00000478469 GRAPLQ8TC17 118 aaPredicted RBP13.96□□□□□ -0.17
PCCB-214ENST00000478469 TNPO1Q92973 898 aaKnown RBP13.96□□□□□ -0.17
PCCB-214ENST00000478469 SAP30BPQ9UHR5 308 aaKnown RBP13.96□□□□□ -0.17
PCCB-214ENST00000478469 SNX14Q9Y5W7 946 aa13.96□□□□□ -0.17
PCCB-214ENST00000478469 KRT18P05783 430 aaKnown RBP13.96□□□□□ -0.18
PCCB-214ENST00000478469 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.18
PCCB-214ENST00000478469 ITPK1Q13572 414 aa13.96□□□□□ -0.18
PCCB-214ENST00000478469 DSCC1Q9BVC3 393 aa13.96□□□□□ -0.18
PCCB-214ENST00000478469 BSDC1Q9NW68 430 aaPredicted RBP13.96□□□□□ -0.18
PCCB-214ENST00000478469 CALM1P0DP23 149 aa13.95□□□□□ -0.18
PCCB-214ENST00000478469 CALM2P0DP24 149 aa13.95□□□□□ -0.18
PCCB-214ENST00000478469 CALM3P0DP25 149 aa13.95□□□□□ -0.18
PCCB-214ENST00000478469 DOK7Q18PE1 504 aa13.95□□□□□ -0.18
PCCB-214ENST00000478469 SEMA3EO15041 775 aa13.95□□□□□ -0.18
PCCB-214ENST00000478469 WDHD1O75717 1129 aaPredicted RBP13.95□□□□□ -0.18
PCCB-214ENST00000478469 CUL5Q93034 780 aa13.95□□□□□ -0.18
PCCB-214ENST00000478469 SEC62Q99442 399 aaKnown RBP13.95□□□□□ -0.18
PCCB-214ENST00000478469 CLEC11AQ9Y240 323 aa13.95□□□□□ -0.18
PCCB-214ENST00000478469 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
PCCB-214ENST00000478469 ALG1Q9BT22 464 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 TFIP11Q9UBB9 837 aaKnown RBP13.94□□□□□ -0.18
PCCB-214ENST00000478469 CARMIL3Q8ND23 1372 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 NPR1P16066 1061 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 HSPA4P34932 840 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 NFIXQ14938 502 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 PRDM1O75626 825 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 RPS6KB1P23443 525 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 MYOM1P52179 1685 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 TEKT1Q969V4 418 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 TMEM87BQ96K49 555 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 PCMTD1Q96MG8 357 aaPredicted RBP13.94□□□□□ -0.18
PCCB-214ENST00000478469 ZKSCAN3Q9BRR0 538 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 RTL9Q8NET4 1388 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 UBE3CQ15386 1083 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
PCCB-214ENST00000478469 PDIA6Q15084 440 aa13.93□□□□□ -0.18
PCCB-214ENST00000478469 PATL2C9JE40 543 aaKnown RBP13.93□□□□□ -0.18
PCCB-214ENST00000478469 CCDC192P0DO97 292 aa13.93□□□□□ -0.18
PCCB-214ENST00000478469 NF2P35240 595 aa13.93□□□□□ -0.18
PCCB-214ENST00000478469 SMIM5Q71RC9 77 aa13.93□□□□□ -0.18
PCCB-214ENST00000478469 NUP62CLQ9H1M0 184 aa13.93□□□□□ -0.18
PCCB-214ENST00000478469 DLGAP5Q15398 846 aa13.93□□□□□ -0.18
PCCB-214ENST00000478469 MAPKAPK5Q8IW41 473 aa13.93□□□□□ -0.18
PCCB-214ENST00000478469 ZSCAN16Q9H4T2 348 aaPredicted RBP13.93□□□□□ -0.18
PCCB-214ENST00000478469 RBM27Q9P2N5 1060 aaKnown RBP13.93□□□□□ -0.18
PCCB-214ENST00000478469 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
PCCB-214ENST00000478469 WDR78Q5VTH9 848 aa13.92□□□□□ -0.18
PCCB-214ENST00000478469 KIAA0825Q8IV33 1275 aa13.92□□□□□ -0.18
PCCB-214ENST00000478469 TGFBRAP1Q8WUH2 860 aa13.92□□□□□ -0.18
PCCB-214ENST00000478469 INTS4Q96HW7 963 aaKnown RBP13.92□□□□□ -0.18
PCCB-214ENST00000478469 TSPY26PQ9H489 355 aa13.92□□□□□ -0.18
PCCB-214ENST00000478469 ANGEL1Q9UNK9 670 aaKnown RBP13.92□□□□□ -0.18
PCCB-214ENST00000478469 CAMTA2O94983 1202 aa13.92□□□□□ -0.18
PCCB-214ENST00000478469 SSBP05455 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCCB-214ENST00000478469 MRE11P49959 708 aa13.92□□□□□ -0.18
PCCB-214ENST00000478469 TRAF1Q13077 416 aa13.92□□□□□ -0.18
PCCB-214ENST00000478469 CC2D2BQ6DHV5 1058 aa13.92□□□□□ -0.18
PCCB-214ENST00000478469 MASTLQ96GX5 879 aa13.92□□□□□ -0.18
PCCB-214ENST00000478469 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
PCCB-214ENST00000478469 FNBP4Q8N3X1 1017 aaPredicted RBP13.92□□□□□ -0.18
PCCB-214ENST00000478469 USP17L12C9JPN9 530 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 USP17L21D6R901 530 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 ZSCAN22P10073 491 aaPredicted RBP13.91□□□□□ -0.18
PCCB-214ENST00000478469 HSPD1P10809 573 aaKnown RBP13.91□□□□□ -0.18
PCCB-214ENST00000478469 ZNF34Q8IZ26 560 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 ANTXR1Q9H6X2 564 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 GDPD2Q9HCC8 539 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 KNDC1Q76NI1 1749 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 RXRAP19793 462 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 NASPP49321 788 aaPredicted RBP13.91□□□□□ -0.18
PCCB-214ENST00000478469 PTH1RQ03431 593 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 PI16Q6UXB8 463 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 CELF1Q92879 486 aaKnown RBP13.91□□□□□ -0.18
PCCB-214ENST00000478469 TM6SF1Q9BZW5 370 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 PXDNQ92626 1479 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 KDM6AO15550 1401 aaPredicted RBP13.91□□□□□ -0.18
PCCB-214ENST00000478469 RABL6Q3YEC7 729 aaPredicted RBP13.91□□□□□ -0.18
PCCB-214ENST00000478469 CCDC148Q8NFR7 591 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 RAB34Q9BZG1 259 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 ZHX3Q9H4I2 956 aa13.91□□□□□ -0.18
PCCB-214ENST00000478469 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 FBXO41Q8TF61 875 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 USP40Q9NVE5 1235 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 BAG4O95429 457 aaKnown RBP13.9□□□□□ -0.18
PCCB-214ENST00000478469 FOXO4P98177 505 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 TCP10Q12799 353 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 AKNAD1Q5T1N1 836 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 CEP57L1Q8IYX8 460 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 CTDSPL2Q05D32 466 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 ZMYM1Q5SVZ6 1142 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 TTLL6Q8N841 843 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 MINPP1Q9UNW1 487 aa13.9□□□□□ -0.18
PCCB-214ENST00000478469 PTPDC1A2A3K4 754 aa13.89□□□□□ -0.19
PCCB-214ENST00000478469 SNAP23O00161 211 aa13.89□□□□□ -0.19
PCCB-214ENST00000478469 SDR42E1Q8WUS8 393 aa13.89□□□□□ -0.19
PCCB-214ENST00000478469 E7EWF7 191 aa13.89□□□□□ -0.19
PCCB-214ENST00000478469 FGAP02671 866 aa13.89□□□□□ -0.19
PCCB-214ENST00000478469 SCNN1DP51172 638 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms