RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 ZBED9Q6R2W3 1325 aa23.71■■□□□ 1.39
EPHB4-205ENST00000478459 NBPF12Q5TAG4 269 aaPredicted RBP23.71■■□□□ 1.39
EPHB4-205ENST00000478459 CDAN1Q8IWY9 1227 aa23.71■■□□□ 1.39
EPHB4-205ENST00000478459 DZIP1LQ8IYY4 767 aaKnown RBP23.71■■□□□ 1.39
EPHB4-205ENST00000478459 HDAC5Q9UQL6 1122 aa23.71■■□□□ 1.39
EPHB4-205ENST00000478459 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.71■■□□□ 1.39
EPHB4-205ENST00000478459 SSC5DA1L4H1 1573 aa23.7■■□□□ 1.38
EPHB4-205ENST00000478459 CIAO1O76071 339 aa23.7■■□□□ 1.38
EPHB4-205ENST00000478459 GNAI2P04899 355 aa23.7■■□□□ 1.38
EPHB4-205ENST00000478459 IL15P40933 162 aaPredicted RBP23.7■■□□□ 1.38
EPHB4-205ENST00000478459 TIMM10P62072 90 aa23.7■■□□□ 1.38
EPHB4-205ENST00000478459 FKBP1BP68106 108 aa23.7■■□□□ 1.38
EPHB4-205ENST00000478459 TFCP2Q12800 502 aa23.7■■□□□ 1.38
EPHB4-205ENST00000478459 RASA3Q14644 834 aa23.7■■□□□ 1.38
EPHB4-205ENST00000478459 COPRSQ9NQ92 184 aa23.7■■□□□ 1.38
EPHB4-205ENST00000478459 SERPINA10Q9UK55 444 aa23.7■■□□□ 1.38
EPHB4-205ENST00000478459 PNMA6EA0A0J9YXQ4 647 aa23.69■■□□□ 1.38
EPHB4-205ENST00000478459 TRPA1O75762 1119 aa23.69■■□□□ 1.38
EPHB4-205ENST00000478459 RLBP1P12271 317 aa23.69■■□□□ 1.38
EPHB4-205ENST00000478459 PHKA1P46020 1223 aa23.69■■□□□ 1.38
EPHB4-205ENST00000478459 FTSJ3Q8IY81 847 aaKnown RBP23.69■■□□□ 1.38
EPHB4-205ENST00000478459 CSRNP1Q96S65 589 aa23.69■■□□□ 1.38
EPHB4-205ENST00000478459 ARMC9Q7Z3E5 817 aa23.68■■□□□ 1.38
EPHB4-205ENST00000478459 TBC1D22AQ8WUA7 517 aa23.68■■□□□ 1.38
EPHB4-205ENST00000478459 SPDYE2Q495Y8 402 aa23.67■■□□□ 1.38
EPHB4-205ENST00000478459 ITPRIPQ8IWB1 547 aa23.67■■□□□ 1.38
EPHB4-205ENST00000478459 TEKT1Q969V4 418 aa23.67■■□□□ 1.38
EPHB4-205ENST00000478459 CLMNQ96JQ2 1002 aa23.67■■□□□ 1.38
EPHB4-205ENST00000478459 RNF186Q9NXI6 227 aa23.67■■□□□ 1.38
EPHB4-205ENST00000478459 TMEM39BQ9GZU3 492 aa23.66■■□□□ 1.38
EPHB4-205ENST00000478459 DIXDC1Q155Q3 683 aa23.65■■□□□ 1.38
EPHB4-205ENST00000478459 NEUROD6Q96NK8 337 aa23.65■■□□□ 1.38
EPHB4-205ENST00000478459 FBXO3Q9UK99 471 aa23.65■■□□□ 1.38
EPHB4-205ENST00000478459 A0A1B0GUL7 405 aa23.64■■□□□ 1.37
EPHB4-205ENST00000478459 PRDX5P30044 214 aa23.64■■□□□ 1.37
EPHB4-205ENST00000478459 PANK1Q8TE04 598 aa23.64■■□□□ 1.37
EPHB4-205ENST00000478459 OTOFQ9HC10 1997 aa23.63■■□□□ 1.37
EPHB4-205ENST00000478459 MTX1Q13505 466 aa23.63■■□□□ 1.37
EPHB4-205ENST00000478459 CCDC102BQ68D86 513 aa23.63■■□□□ 1.37
EPHB4-205ENST00000478459 WDR66Q8TBY9 1149 aa23.63■■□□□ 1.37
EPHB4-205ENST00000478459 GNL3LQ9NVN8 582 aaKnown RBP23.63■■□□□ 1.37
EPHB4-205ENST00000478459 PPP2R3BQ9Y5P8 575 aa23.63■■□□□ 1.37
EPHB4-205ENST00000478459 CA12O43570 354 aa23.62■■□□□ 1.37
EPHB4-205ENST00000478459 PPP1R12BO60237 982 aaPredicted RBP23.62■■□□□ 1.37
EPHB4-205ENST00000478459 SUPT20HL1Q3ZLR7 823 aa23.62■■□□□ 1.37
EPHB4-205ENST00000478459 LDLRAD1Q5T700 205 aa23.62■■□□□ 1.37
EPHB4-205ENST00000478459 XAGE2Q96GT9 111 aa23.62■■□□□ 1.37
EPHB4-205ENST00000478459 AK9Q5TCS8 1911 aa23.62■■□□□ 1.37
EPHB4-205ENST00000478459 USP2O75604 605 aaPredicted RBP23.61■■□□□ 1.37
EPHB4-205ENST00000478459 G3BP1Q13283 466 aaKnown RBP eCLIP23.61■■□□□ 1.37
EPHB4-205ENST00000478459 APOBEC3HQ6NTF7 200 aaKnown RBP23.61■■□□□ 1.37
EPHB4-205ENST00000478459 SLC10A4Q96EP9 437 aa23.61■■□□□ 1.37
EPHB4-205ENST00000478459 TBC1D8O95759 1140 aa23.6■■□□□ 1.37
EPHB4-205ENST00000478459 TNFAIP1Q13829 316 aa23.6■■□□□ 1.37
EPHB4-205ENST00000478459 TEPSINQ96N21 525 aa23.6■■□□□ 1.37
EPHB4-205ENST00000478459 MYH2Q9UKX2 1941 aa23.6■■□□□ 1.37
EPHB4-205ENST00000478459 LDHBP07195 334 aaKnown RBP23.59■■□□□ 1.37
EPHB4-205ENST00000478459 TNNI2P48788 182 aa23.59■■□□□ 1.37
EPHB4-205ENST00000478459 OS9Q13438 667 aaPredicted RBP23.59■■□□□ 1.37
EPHB4-205ENST00000478459 RASGRF1Q13972 1273 aa23.59■■□□□ 1.37
EPHB4-205ENST00000478459 PI16Q6UXB8 463 aa23.59■■□□□ 1.37
EPHB4-205ENST00000478459 ZDHHC15Q96MV8 337 aa23.59■■□□□ 1.37
EPHB4-205ENST00000478459 ELP3Q9H9T3 547 aa23.59■■□□□ 1.37
EPHB4-205ENST00000478459 ABCF2Q9UG63 623 aa23.59■■□□□ 1.37
EPHB4-205ENST00000478459 DENND2AQ9ULE3 1009 aa23.59■■□□□ 1.37
EPHB4-205ENST00000478459 MAST3O60307 1309 aa23.59■■□□□ 1.37
EPHB4-205ENST00000478459 HDLBPQ00341 1268 aaKnown RBP23.58■■□□□ 1.37
EPHB4-205ENST00000478459 GORABQ5T7V8 394 aa23.58■■□□□ 1.37
EPHB4-205ENST00000478459 SPRYD7Q5W111 196 aa23.58■■□□□ 1.37
EPHB4-205ENST00000478459 TMOD2Q9NZR1 351 aa23.58■■□□□ 1.37
EPHB4-205ENST00000478459 DAGLAQ9Y4D2 1042 aa23.58■■□□□ 1.37
EPHB4-205ENST00000478459 ZBTB7BO15156 539 aaPredicted RBP23.57■■□□□ 1.36
EPHB4-205ENST00000478459 IREB2P48200 963 aaKnown RBP23.57■■□□□ 1.36
EPHB4-205ENST00000478459 TCP10Q12799 353 aa23.57■■□□□ 1.36
EPHB4-205ENST00000478459 ABHD8Q96I13 439 aa23.57■■□□□ 1.36
EPHB4-205ENST00000478459 WNK4Q96J92 1243 aa23.57■■□□□ 1.36
EPHB4-205ENST00000478459 AKAP2Q9Y2D5 859 aa23.57■■□□□ 1.36
EPHB4-205ENST00000478459 DGKZQ13574 1117 aa23.56■■□□□ 1.36
EPHB4-205ENST00000478459 CNKSR2Q8WXI2 1034 aa23.56■■□□□ 1.36
EPHB4-205ENST00000478459 SURF6O75683 361 aaKnown RBP23.55■■□□□ 1.36
EPHB4-205ENST00000478459 GJA5P36382 358 aa23.55■■□□□ 1.36
EPHB4-205ENST00000478459 ATP8B2P98198 1209 aa23.55■■□□□ 1.36
EPHB4-205ENST00000478459 MAP3K11Q16584 847 aa23.55■■□□□ 1.36
EPHB4-205ENST00000478459 CDC42EP5Q6NZY7 148 aa23.55■■□□□ 1.36
EPHB4-205ENST00000478459 HHIPL2Q6UWX4 724 aa23.55■■□□□ 1.36
EPHB4-205ENST00000478459 MCOLN1Q9GZU1 580 aa23.55■■□□□ 1.36
EPHB4-205ENST00000478459 BCL11AQ9H165 835 aa23.55■■□□□ 1.36
EPHB4-205ENST00000478459 SAGE1Q9NXZ1 904 aa23.55■■□□□ 1.36
EPHB4-205ENST00000478459 SUGT1Q9Y2Z0 365 aa23.55■■□□□ 1.36
EPHB4-205ENST00000478459 NFIAQ12857 509 aa23.54■■□□□ 1.36
EPHB4-205ENST00000478459 POLA2Q14181 598 aa23.54■■□□□ 1.36
EPHB4-205ENST00000478459 MVPQ14764 893 aaKnown RBP23.54■■□□□ 1.36
EPHB4-205ENST00000478459 TBC1D9Q6ZT07 1266 aa23.54■■□□□ 1.36
EPHB4-205ENST00000478459 MIGA2Q7L4E1 593 aa23.54■■□□□ 1.36
EPHB4-205ENST00000478459 R3HDMLQ9H3Y0 253 aa23.54■■□□□ 1.36
EPHB4-205ENST00000478459 USP40Q9NVE5 1235 aa23.54■■□□□ 1.36
EPHB4-205ENST00000478459 SEMA3EO15041 775 aa23.53■■□□□ 1.36
EPHB4-205ENST00000478459 DZIP1Q86YF9 867 aaKnown RBP23.53■■□□□ 1.36
EPHB4-205ENST00000478459 ANKRD13AQ8IZ07 590 aa23.53■■□□□ 1.36
EPHB4-205ENST00000478459 SNRKQ9NRH2 765 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms