RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
LCLAT1-209ENST00000478015 PRDX5P30044 214 aa12.74□□□□□ -0.37
LCLAT1-209ENST00000478015 IL15P40933 162 aaPredicted RBP12.74□□□□□ -0.37
LCLAT1-209ENST00000478015 CTCFP49711 727 aaPredicted RBP12.74□□□□□ -0.37
LCLAT1-209ENST00000478015 APOBEC3HQ6NTF7 200 aaKnown RBP12.74□□□□□ -0.37
LCLAT1-209ENST00000478015 CLMNQ96JQ2 1002 aa12.74□□□□□ -0.37
LCLAT1-209ENST00000478015 VEZTQ9HBM0 779 aa12.74□□□□□ -0.37
LCLAT1-209ENST00000478015 ZNF70Q9UC06 446 aaPredicted RBP12.74□□□□□ -0.37
LCLAT1-209ENST00000478015 SERPINA10Q9UK55 444 aa12.74□□□□□ -0.37
LCLAT1-209ENST00000478015 SLC5A1P13866 664 aa12.73□□□□□ -0.37
LCLAT1-209ENST00000478015 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
LCLAT1-209ENST00000478015 NOGQ13253 232 aa12.73□□□□□ -0.37
LCLAT1-209ENST00000478015 RASA3Q14644 834 aa12.73□□□□□ -0.37
LCLAT1-209ENST00000478015 DIXDC1Q155Q3 683 aa12.73□□□□□ -0.37
LCLAT1-209ENST00000478015 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
LCLAT1-209ENST00000478015 CCDC102BQ68D86 513 aa12.73□□□□□ -0.37
LCLAT1-209ENST00000478015 PI16Q6UXB8 463 aa12.73□□□□□ -0.37
LCLAT1-209ENST00000478015 TMEM39BQ9GZU3 492 aa12.73□□□□□ -0.37
LCLAT1-209ENST00000478015 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
LCLAT1-209ENST00000478015 A0A1B0GUL7 405 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 FRAT2O75474 233 aaPredicted RBP12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 MMP14P50281 582 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 RASGRF1Q13972 1273 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 POLA2Q14181 598 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 LDLRAD1Q5T700 205 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 APOBEC3FQ8IUX4 373 aaKnown RBP12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 TNS4Q8IZW8 715 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 ZNF384Q8TF68 577 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 OTOFQ9HC10 1997 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 TCP10L2B9ZVM9 353 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 AIDAQ96BJ3 306 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 PRDM10Q9NQV6 1147 aa12.72□□□□□ -0.37
LCLAT1-209ENST00000478015 FKBP1BP68106 108 aa12.71□□□□□ -0.37
LCLAT1-209ENST00000478015 XAGE2Q96GT9 111 aa12.71□□□□□ -0.37
LCLAT1-209ENST00000478015 ANGEL1Q9UNK9 670 aaKnown RBP12.71□□□□□ -0.37
LCLAT1-209ENST00000478015 AKAP11Q9UKA4 1901 aa12.71□□□□□ -0.38
LCLAT1-209ENST00000478015 USP2O75604 605 aaPredicted RBP12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 TTLL12Q14166 644 aaPredicted RBP12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 C20orf194Q5TEA3 1177 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 SSH3Q8TE77 659 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 CCDC102AQ96A19 550 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 ZDHHC15Q96MV8 337 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 MYO5AQ9Y4I1 1855 aaKnown RBP12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 TRPA1O75762 1119 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 CAPN15O75808 1086 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 GJA5P36382 358 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 ATP8B2P98198 1209 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 TBC1D22AQ8WUA7 517 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 R3HDMLQ9H3Y0 253 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 RNF186Q9NXI6 227 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 DAGLAQ9Y4D2 1042 aa12.7□□□□□ -0.38
LCLAT1-209ENST00000478015 MYH2Q9UKX2 1941 aa12.69□□□□□ -0.38
LCLAT1-209ENST00000478015 SLURP2P0DP57 97 aa12.69□□□□□ -0.38
LCLAT1-209ENST00000478015 NFIAQ12857 509 aa12.69□□□□□ -0.38
LCLAT1-209ENST00000478015 FTSJ3Q8IY81 847 aaKnown RBP12.69□□□□□ -0.38
LCLAT1-209ENST00000478015 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
LCLAT1-209ENST00000478015 MYO1BO43795 1136 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 HDLBPQ00341 1268 aaKnown RBP12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 MAP3K11Q16584 847 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 TBC1D9Q6ZT07 1266 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 ZFPM1Q8IX07 1006 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 SIRT2Q8IXJ6 389 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 TEKT1Q969V4 418 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 WDR66Q8TBY9 1149 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 NEUROD6Q96NK8 337 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 MRIQ9BWK5 157 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 TLR7Q9NYK1 1049 aaKnown RBP12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 HDAC5Q9UQL6 1122 aa12.68□□□□□ -0.38
LCLAT1-209ENST00000478015 TNRC18O15417 2968 aaPredicted RBP12.67□□□□□ -0.38
LCLAT1-209ENST00000478015 CDC42EP5Q6NZY7 148 aa12.67□□□□□ -0.38
LCLAT1-209ENST00000478015 HHIPL2Q6UWX4 724 aa12.67□□□□□ -0.38
LCLAT1-209ENST00000478015 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.67□□□□□ -0.38
LCLAT1-209ENST00000478015 BEGAINQ9BUH8 593 aa12.67□□□□□ -0.38
LCLAT1-209ENST00000478015 HMG20BQ9P0W2 317 aa12.67□□□□□ -0.38
LCLAT1-209ENST00000478015 COG6Q9Y2V7 657 aa12.67□□□□□ -0.38
LCLAT1-209ENST00000478015 NF2P35240 595 aa12.66□□□□□ -0.38
LCLAT1-209ENST00000478015 MCAMP43121 646 aa12.66□□□□□ -0.38
LCLAT1-209ENST00000478015 SPRYD7Q5W111 196 aa12.66□□□□□ -0.38
LCLAT1-209ENST00000478015 DBNDD2Q9BQY9 259 aa12.66□□□□□ -0.38
LCLAT1-209ENST00000478015 FAM198AQ9UFP1 575 aa12.66□□□□□ -0.38
LCLAT1-209ENST00000478015 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
LCLAT1-209ENST00000478015 SUGT1Q9Y2Z0 365 aa12.66□□□□□ -0.38
LCLAT1-209ENST00000478015 PPP2R3BQ9Y5P8 575 aa12.66□□□□□ -0.38
LCLAT1-209ENST00000478015 SALL1Q9NSC2 1324 aa12.66□□□□□ -0.38
LCLAT1-209ENST00000478015 SURF6O75683 361 aaKnown RBP12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 DENND2AQ9ULE3 1009 aa12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 NOP58Q9Y2X3 529 aaKnown RBP12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 TBC1D8O95759 1140 aa12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 LDHBP07195 334 aaKnown RBP12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 TCP10Q12799 353 aa12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 G3BP1Q13283 466 aaKnown RBP eCLIP12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 TNNI3KQ59H18 835 aa12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 EAF2Q96CJ1 260 aaPredicted RBP12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 SNRKQ9NRH2 765 aa12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 ABCF2Q9UG63 623 aa12.65□□□□□ -0.38
LCLAT1-209ENST00000478015 EXOC6BQ9Y2D4 811 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms