RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 ZNF496Q96IT1 587 aaPredicted RBP5.71□□□□□ -1.5
CNTN3-202ENST00000477856 CCNL1Q9UK58 526 aaPredicted RBP5.71□□□□□ -1.5
CNTN3-202ENST00000477856 FANCIQ9NVI1 1328 aa5.71□□□□□ -1.5
CNTN3-202ENST00000477856 COL5A3P25940 1745 aaPredicted RBP5.71□□□□□ -1.5
CNTN3-202ENST00000477856 TJP1Q07157 1748 aa5.71□□□□□ -1.5
CNTN3-202ENST00000477856 NUP188Q5SRE5 1749 aa5.71□□□□□ -1.5
CNTN3-202ENST00000477856 SOCS7O14512 581 aa5.7□□□□□ -1.5
CNTN3-202ENST00000477856 PTCD1O75127 700 aaKnown RBP5.7□□□□□ -1.5
CNTN3-202ENST00000477856 STARD3NLO95772 234 aa5.7□□□□□ -1.5
CNTN3-202ENST00000477856 SNRPA1P09661 255 aaKnown RBP5.7□□□□□ -1.5
CNTN3-202ENST00000477856 EIF4A1P60842 406 aaKnown RBP5.7□□□□□ -1.5
CNTN3-202ENST00000477856 TXNRD1Q16881 649 aa5.7□□□□□ -1.5
CNTN3-202ENST00000477856 LYPD8Q6UX82 237 aa5.7□□□□□ -1.5
CNTN3-202ENST00000477856 CAMKK2Q96RR4 588 aa5.7□□□□□ -1.5
CNTN3-202ENST00000477856 PLVAPQ9BX97 442 aa5.7□□□□□ -1.5
CNTN3-202ENST00000477856 NUCKS1Q9H1E3 243 aaKnown RBP5.7□□□□□ -1.5
CNTN3-202ENST00000477856 C4BP0C0L5 1744 aa5.7□□□□□ -1.5
CNTN3-202ENST00000477856 SPDYE5A6NIY4 337 aa5.69□□□□□ -1.5
CNTN3-202ENST00000477856 KCNQ3O43525 872 aa5.69□□□□□ -1.5
CNTN3-202ENST00000477856 GIGYF1O75420 1035 aaPredicted RBP5.69□□□□□ -1.5
CNTN3-202ENST00000477856 SLFN5Q08AF3 891 aa5.69□□□□□ -1.5
CNTN3-202ENST00000477856 EZH2Q15910 746 aaKnown RBP5.69□□□□□ -1.5
CNTN3-202ENST00000477856 DEFB132Q7Z7B7 95 aa5.69□□□□□ -1.5
CNTN3-202ENST00000477856 NPM2Q86SE8 214 aaKnown RBP5.69□□□□□ -1.5
CNTN3-202ENST00000477856 TSR2Q969E8 191 aaKnown RBP5.69□□□□□ -1.5
CNTN3-202ENST00000477856 MIS18AQ9NYP9 233 aa5.69□□□□□ -1.5
CNTN3-202ENST00000477856 MAP10Q9P2G4 905 aa5.69□□□□□ -1.5
CNTN3-202ENST00000477856 GGA1Q9UJY5 639 aa5.69□□□□□ -1.5
CNTN3-202ENST00000477856 CNTNAP4Q9C0A0 1308 aa5.69□□□□□ -1.5
CNTN3-202ENST00000477856 TAF1LQ8IZX4 1826 aa5.69□□□□□ -1.5
CNTN3-202ENST00000477856 QSER1Q2KHR3 1735 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 MAGEB6P1A0A0J9YX57 407 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 CT47B1P0C2W7 299 aaPredicted RBP5.68□□□□□ -1.5
CNTN3-202ENST00000477856 ITPK1Q13572 414 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 HDGFL1Q5TGJ6 251 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 NBPF14Q5TI25 921 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 DUSP27Q5VZP5 1158 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 DNAJC10Q8IXB1 793 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 TRMT2AQ8IZ69 625 aaKnown RBP5.68□□□□□ -1.5
CNTN3-202ENST00000477856 LINC00116Q8NCU8 138 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 ZNF428Q96B54 188 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 AK7Q96M32 723 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 YTHDC1Q96MU7 727 aaKnown RBP5.68□□□□□ -1.5
CNTN3-202ENST00000477856 PCMTD2Q9NV79 361 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 STK32BQ9NY57 414 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 KAT6BQ8WYB5 2073 aa5.68□□□□□ -1.5
CNTN3-202ENST00000477856 CYP19A1P11511 503 aaPredicted RBP5.67□□□□□ -1.5
CNTN3-202ENST00000477856 EPXP11678 715 aa5.67□□□□□ -1.5
CNTN3-202ENST00000477856 TWISTNBQ3B726 338 aaPredicted RBP5.67□□□□□ -1.5
CNTN3-202ENST00000477856 PRRT3Q5FWE3 981 aa5.67□□□□□ -1.5
CNTN3-202ENST00000477856 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
CNTN3-202ENST00000477856 CCDC30Q5VVM6 783 aa5.67□□□□□ -1.5
CNTN3-202ENST00000477856 ARMC2Q8NEN0 867 aa5.67□□□□□ -1.5
CNTN3-202ENST00000477856 FLAD1Q8NFF5 587 aa5.67□□□□□ -1.5
CNTN3-202ENST00000477856 SLC4A9Q96Q91 983 aa5.67□□□□□ -1.5
CNTN3-202ENST00000477856 STK31Q9BXU1 1019 aa5.67□□□□□ -1.5
CNTN3-202ENST00000477856 CCDC87Q9NVE4 849 aa5.67□□□□□ -1.5
CNTN3-202ENST00000477856 A0A087WZG4 1122 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 SPDYE3A6NKU9 549 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 BMP4P12644 408 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 SSFA2P28290 1259 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 IL6STP40189 918 aaPredicted RBP5.66□□□□□ -1.5
CNTN3-202ENST00000477856 PTGIRP43119 386 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 CRKLP46109 303 aaKnown RBP5.66□□□□□ -1.5
CNTN3-202ENST00000477856 RNF144AP50876 292 aaPredicted RBP5.66□□□□□ -1.5
CNTN3-202ENST00000477856 KCNQ4P56696 695 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 EXOSC9Q06265 439 aaKnown RBP5.66□□□□□ -1.5
CNTN3-202ENST00000477856 SLC15A2Q16348 729 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 TMEM132AQ24JP5 1023 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 C8orf58Q8NAV2 365 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 TFCP2L1Q9NZI6 479 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 DBF4Q9UBU7 674 aaPredicted RBP5.66□□□□□ -1.5
CNTN3-202ENST00000477856 RTCBQ9Y3I0 505 aaKnown RBP5.66□□□□□ -1.5
CNTN3-202ENST00000477856 USP16Q9Y5T5 823 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 UBR3Q6ZT12 1888 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 COL15A1P39059 1388 aa5.66□□□□□ -1.5
CNTN3-202ENST00000477856 PRAMEF22A3QJZ6 481 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 ELL2O00472 640 aaPredicted RBP5.65□□□□□ -1.5
CNTN3-202ENST00000477856 VAMP4O75379 141 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 RPS6KA4O75676 772 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 EIF2S2P20042 333 aaKnown RBP5.65□□□□□ -1.5
CNTN3-202ENST00000477856 MTMR2Q13614 643 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 ZNF827Q17R98 1081 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 KRT24Q2M2I5 525 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 TRAPPC3LQ5T215 181 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 INTS5Q6P9B9 1019 aaKnown RBP5.65□□□□□ -1.5
CNTN3-202ENST00000477856 KIF6Q6ZMV9 814 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 TSPYL6Q8N831 410 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 DDX21Q9NR30 783 aaKnown RBP eCLIP5.65□□□□□ -1.5
CNTN3-202ENST00000477856 HYPKQ9NX55 129 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 RNF112Q9ULX5 631 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 ZBTB1Q9Y2K1 713 aa5.65□□□□□ -1.5
CNTN3-202ENST00000477856 SCN7AQ01118 1682 aa5.65□□□□□ -1.51
CNTN3-202ENST00000477856 TUBGCP6Q96RT7 1819 aa5.64□□□□□ -1.51
CNTN3-202ENST00000477856 DDX58O95786 925 aaKnown RBP5.64□□□□□ -1.51
CNTN3-202ENST00000477856 ADH1AP07327 375 aa5.64□□□□□ -1.51
CNTN3-202ENST00000477856 CANXP27824 592 aaKnown RBP5.64□□□□□ -1.51
CNTN3-202ENST00000477856 RFC4P35249 363 aa5.64□□□□□ -1.51
CNTN3-202ENST00000477856 EIF5P55010 431 aaKnown RBP5.64□□□□□ -1.51
CNTN3-202ENST00000477856 ALDH1L2Q3SY69 923 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms