RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 APBB1O00213 710 aa27.53■■■□□ 2
SF1-214ENST00000477596 VEGFBP49765 207 aa27.53■■■□□ 2
SF1-214ENST00000477596 SAPCD2Q86UD0 394 aa27.53■■■□□ 2
SF1-214ENST00000477596 EAF2Q96CJ1 260 aaPredicted RBP27.53■■■□□ 2
SF1-214ENST00000477596 TDRD3Q9H7E2 651 aaKnown RBP27.53■■■□□ 2
SF1-214ENST00000477596 VEZTQ9HBM0 779 aa27.53■■■□□ 2
SF1-214ENST00000477596 SALL1Q9NSC2 1324 aa27.52■■■□□ 2
SF1-214ENST00000477596 HMMRO75330 724 aa27.52■■■□□ 2
SF1-214ENST00000477596 ARID4AP29374 1257 aaPredicted RBP27.52■■■□□ 2
SF1-214ENST00000477596 DEFB115Q30KQ5 88 aa27.52■■■□□ 2
SF1-214ENST00000477596 JMYQ8N9B5 988 aa27.52■■■□□ 2
SF1-214ENST00000477596 TEKT1Q969V4 418 aa27.52■■■□□ 2
SF1-214ENST00000477596 CCDC8Q9H0W5 538 aaPredicted RBP27.52■■■□□ 2
SF1-214ENST00000477596 GBA2Q9HCG7 927 aaPredicted RBP27.52■■■□□ 2
SF1-214ENST00000477596 HMG20BQ9P0W2 317 aa27.52■■■□□ 2
SF1-214ENST00000477596 DBNLQ9UJU6 430 aaKnown RBP27.52■■■□□ 2
SF1-214ENST00000477596 SUGT1Q9Y2Z0 365 aa27.52■■■□□ 2
SF1-214ENST00000477596 ZBTB22O15209 634 aa27.51■■□□□ 1.99
SF1-214ENST00000477596 DIXDC1Q155Q3 683 aa27.51■■□□□ 1.99
SF1-214ENST00000477596 PAXIP1Q6ZW49 1069 aaPredicted RBP27.51■■□□□ 1.99
SF1-214ENST00000477596 IL1RAPL2Q9NP60 686 aa27.51■■□□□ 1.99
SF1-214ENST00000477596 ZNF70Q9UC06 446 aaPredicted RBP27.51■■□□□ 1.99
SF1-214ENST00000477596 MAST3O60307 1309 aa27.5■■□□□ 1.99
SF1-214ENST00000477596 PDS5AQ29RF7 1337 aaKnown RBP27.5■■□□□ 1.99
SF1-214ENST00000477596 MYO1BO43795 1136 aa27.5■■□□□ 1.99
SF1-214ENST00000477596 MCAMP43121 646 aa27.5■■□□□ 1.99
SF1-214ENST00000477596 HDLBPQ00341 1268 aaKnown RBP27.5■■□□□ 1.99
SF1-214ENST00000477596 SPDYE2Q495Y8 402 aa27.5■■□□□ 1.99
SF1-214ENST00000477596 CYP4F22Q6NT55 531 aa27.5■■□□□ 1.99
SF1-214ENST00000477596 ERC1Q8IUD2 1116 aa27.5■■□□□ 1.99
SF1-214ENST00000477596 CRBNQ96SW2 442 aa27.5■■□□□ 1.99
SF1-214ENST00000477596 PCNTO95613 3336 aa27.49■■□□□ 1.99
SF1-214ENST00000477596 LDHBP07195 334 aaKnown RBP27.49■■□□□ 1.99
SF1-214ENST00000477596 GRM1Q13255 1194 aa27.49■■□□□ 1.99
SF1-214ENST00000477596 MOB2Q70IA6 237 aa27.49■■□□□ 1.99
SF1-214ENST00000477596 RHPN1Q8TCX5 695 aa27.49■■□□□ 1.99
SF1-214ENST00000477596 DEFB129Q9H1M3 183 aa27.49■■□□□ 1.99
SF1-214ENST00000477596 PAPPA2Q9BXP8 1791 aa27.49■■□□□ 1.99
SF1-214ENST00000477596 AKAP11Q9UKA4 1901 aa27.48■■□□□ 1.99
SF1-214ENST00000477596 CACNB3P54284 484 aa27.48■■□□□ 1.99
SF1-214ENST00000477596 HUNKP57058 714 aa27.48■■□□□ 1.99
SF1-214ENST00000477596 TTC39AQ5SRH9 613 aa27.48■■□□□ 1.99
SF1-214ENST00000477596 SPATA5Q8NB90 893 aa27.48■■□□□ 1.99
SF1-214ENST00000477596 ZDHHC15Q96MV8 337 aa27.48■■□□□ 1.99
SF1-214ENST00000477596 ABCF2Q9UG63 623 aa27.48■■□□□ 1.99
SF1-214ENST00000477596 SSC5DA1L4H1 1573 aa27.48■■□□□ 1.99
SF1-214ENST00000477596 HSP90AB4PQ58FF6 505 aa27.47■■□□□ 1.99
SF1-214ENST00000477596 APOBEC3HQ6NTF7 200 aaKnown RBP27.47■■□□□ 1.99
SF1-214ENST00000477596 AACSQ86V21 672 aa27.47■■□□□ 1.99
SF1-214ENST00000477596 C2orf69Q8N8R5 385 aa27.47■■□□□ 1.99
SF1-214ENST00000477596 CAPNS2Q96L46 248 aa27.47■■□□□ 1.99
SF1-214ENST00000477596 SNRKQ9NRH2 765 aa27.47■■□□□ 1.99
SF1-214ENST00000477596 DAGLAQ9Y4D2 1042 aa27.47■■□□□ 1.99
SF1-214ENST00000477596 WDR33Q9C0J8 1336 aaKnown RBP27.46■■□□□ 1.99
SF1-214ENST00000477596 HHIPL2Q6UWX4 724 aa27.46■■□□□ 1.99
SF1-214ENST00000477596 TBC1D9Q6ZT07 1266 aa27.46■■□□□ 1.99
SF1-214ENST00000477596 BCL11AQ9H165 835 aa27.46■■□□□ 1.99
SF1-214ENST00000477596 MYH2Q9UKX2 1941 aa27.45■■□□□ 1.99
SF1-214ENST00000477596 THSD7BQ9C0I4 1608 aa27.45■■□□□ 1.99
SF1-214ENST00000477596 TCP10L2B9ZVM9 353 aa27.45■■□□□ 1.98
SF1-214ENST00000477596 UQCRFS1P1P0C7P4 283 aa27.45■■□□□ 1.98
SF1-214ENST00000477596 MRIQ9BWK5 157 aa27.45■■□□□ 1.98
SF1-214ENST00000477596 FZD1Q9UP38 647 aa27.45■■□□□ 1.98
SF1-214ENST00000477596 PCDHB15Q9Y5E8 787 aa27.45■■□□□ 1.98
SF1-214ENST00000477596 RASA3Q14644 834 aa27.44■■□□□ 1.98
SF1-214ENST00000477596 CCDC158Q5M9N0 1113 aa27.44■■□□□ 1.98
SF1-214ENST00000477596 CDAN1Q8IWY9 1227 aa27.44■■□□□ 1.98
SF1-214ENST00000477596 ZGPATQ8N5A5 531 aaKnown RBP27.44■■□□□ 1.98
SF1-214ENST00000477596 KIF1BPQ96EK5 621 aa27.44■■□□□ 1.98
SF1-214ENST00000477596 PRKG1Q13976 671 aa27.43■■□□□ 1.98
SF1-214ENST00000477596 DZIP1Q86YF9 867 aaKnown RBP27.43■■□□□ 1.98
SF1-214ENST00000477596 ZNF384Q8TF68 577 aa27.43■■□□□ 1.98
SF1-214ENST00000477596 AOC2O75106 756 aa27.42■■□□□ 1.98
SF1-214ENST00000477596 HHIPL1Q96JK4 782 aa27.42■■□□□ 1.98
SF1-214ENST00000477596 MYO5AQ9Y4I1 1855 aaKnown RBP27.41■■□□□ 1.98
SF1-214ENST00000477596 TTLL12Q14166 644 aaPredicted RBP27.41■■□□□ 1.98
SF1-214ENST00000477596 NBPF12Q5TAG4 269 aaPredicted RBP27.41■■□□□ 1.98
SF1-214ENST00000477596 TMEM39BQ9GZU3 492 aa27.41■■□□□ 1.98
SF1-214ENST00000477596 PPP2R3BQ9Y5P8 575 aa27.41■■□□□ 1.98
SF1-214ENST00000477596 NDUFB9Q9Y6M9 179 aa27.41■■□□□ 1.98
SF1-214ENST00000477596 UBE2Q2LH0YL09 131 aa27.4■■□□□ 1.98
SF1-214ENST00000477596 RAB11FIP3O75154 756 aa27.4■■□□□ 1.98
SF1-214ENST00000477596 NF2P35240 595 aa27.4■■□□□ 1.98
SF1-214ENST00000477596 ZAP70P43403 619 aa27.4■■□□□ 1.98
SF1-214ENST00000477596 MECOMQ03112 1051 aa27.4■■□□□ 1.98
SF1-214ENST00000477596 SPTY2D1Q68D10 685 aaPredicted RBP27.4■■□□□ 1.98
SF1-214ENST00000477596 CDC42EP5Q6NZY7 148 aa27.4■■□□□ 1.98
SF1-214ENST00000477596 ERICH6Q7L0X2 663 aa27.4■■□□□ 1.98
SF1-214ENST00000477596 MAST2Q6P0Q8 1798 aa27.4■■□□□ 1.98
SF1-214ENST00000477596 GAKO14976 1311 aa27.4■■□□□ 1.98
SF1-214ENST00000477596 SMARCA5O60264 1052 aaPredicted RBP27.39■■□□□ 1.98
SF1-214ENST00000477596 ECE1P42892 770 aa27.39■■□□□ 1.98
SF1-214ENST00000477596 TNFAIP1Q13829 316 aa27.39■■□□□ 1.98
SF1-214ENST00000477596 RGMBQ6NW40 437 aa27.39■■□□□ 1.98
SF1-214ENST00000477596 CLASRPQ8N2M8 674 aaKnown RBP27.39■■□□□ 1.98
SF1-214ENST00000477596 ZNF512BQ96KM6 892 aaPredicted RBP27.39■■□□□ 1.98
SF1-214ENST00000477596 CYP2E1P05181 493 aaPredicted RBP27.38■■□□□ 1.97
SF1-214ENST00000477596 FKBP1BP68106 108 aa27.38■■□□□ 1.97
SF1-214ENST00000477596 TEPSINQ96N21 525 aa27.38■■□□□ 1.97
SF1-214ENST00000477596 TMOD2Q9NZR1 351 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms