RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 C9orf78Q9NZ63 289 aaPredicted RBP8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 ZNF70Q9UC06 446 aaPredicted RBP8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 IQSEC3Q9UPP2 1182 aaPredicted RBP8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 MGAMO43451 1857 aa8.47□□□□□ -1.05
RTFDC1-206ENST00000477485 GTF2A2P52657 109 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 FKBP1AP62942 108 aaKnown RBP8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 FOXO4P98177 505 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 CHAF1AQ13111 956 aaPredicted RBP8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 VGLL4Q14135 290 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 KIF22Q14807 665 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 SPDYE2Q495Y8 402 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 SLC4A10Q6U841 1118 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 CDAN1Q8IWY9 1227 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 WWC1Q8IX03 1113 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 TMEM39BQ9GZU3 492 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 PTCH2Q9Y6C5 1203 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 FANCIQ9NVI1 1328 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 IRS2Q9Y4H2 1338 aa8.46□□□□□ -1.06
RTFDC1-206ENST00000477485 UNCXA6NJT0 531 aa8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 HIBADHP31937 336 aaKnown RBP8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 CRKP46108 304 aa8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 CACNB3P54284 484 aa8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 EPHA10Q5JZY3 1008 aa8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 C15orf52Q6ZUT6 534 aaKnown RBP8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 SH3TC2Q8TF17 1288 aa8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 BRI3BPQ8WY22 251 aa8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 ARMC5Q96C12 935 aa8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 TMOD2Q9NZR1 351 aa8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 SERPINA10Q9UK55 444 aa8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 DOCK2Q92608 1830 aa8.45□□□□□ -1.06
RTFDC1-206ENST00000477485 GRM8O00222 908 aa8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 MAP3K9P80192 1104 aa8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 CAP1Q01518 475 aa8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 EXOSC9Q06265 439 aaKnown RBP8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 FAM43AQ8N2R8 423 aa8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 ZNF333Q96JL9 665 aa8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 WRNIP1Q96S55 665 aa8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 COLQQ9Y215 455 aaPredicted RBP8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 FAM205AQ6ZU69 1335 aa8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 CENPFP49454 3210 aa8.44□□□□□ -1.06
RTFDC1-206ENST00000477485 TESPA1A2RU30 521 aaPredicted RBP8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 CETPP11597 493 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 CCDC27Q2M243 656 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 CCDC184Q52MB2 194 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 CAVIN4Q5BKX8 364 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 METTL24Q5JXM2 366 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 BEND3Q5T5X7 828 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 TDRD7Q8NHU6 1098 aaKnown RBP8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 ZKSCAN4Q969J2 545 aaPredicted RBP8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 TEKT1Q969V4 418 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 MS4A4AQ96JQ5 239 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 PUS3Q9BZE2 481 aaKnown RBP8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 ARHGAP39Q9C0H5 1083 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 SPINK5Q9NQ38 1064 aaPredicted RBP8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 IL16Q14005 1332 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 HTTP42858 3142 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 CEP290O15078 2479 aa8.43□□□□□ -1.06
RTFDC1-206ENST00000477485 H0YGN5 161 aa8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 VAMP4O75379 141 aa8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 ZEB1P37275 1124 aaPredicted RBP8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 FXR1P51114 621 aaKnown RBP eCLIP8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 UBE4AQ14139 1066 aa8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.42□□□□□ -1.064e-6■■■□□ 15.5
RTFDC1-206ENST00000477485 DPF3Q92784 378 aa8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 FAM84BQ96KN1 310 aaPredicted RBP8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 TEPSINQ96N21 525 aa8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 SRCIN1Q9C0H9 1055 aa8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 BIN2Q9UBW5 565 aaPredicted RBP8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 MROH5Q6ZUA9 1318 aa8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 MYH2Q9UKX2 1941 aa8.42□□□□□ -1.06
RTFDC1-206ENST00000477485 SPDYE5A6NIY4 337 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 TLR2O60603 784 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 FMNL1O95466 1100 aaPredicted RBP8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 LACTBP83111 547 aaPredicted RBP8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 SNAPC2Q13487 334 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 GRIK5Q16478 980 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 DCAF15Q66K64 600 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 CHRDL2Q6WN34 429 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 MIGA2Q7L4E1 593 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 ERO1BQ86YB8 467 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 POTEDQ86YR6 584 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 RAET1EQ8TD07 263 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 TBC1D22AQ8WUA7 517 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 HOOK2Q96ED9 719 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 SUCLG2Q96I99 432 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 CPA4Q9UI42 421 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 SNCAIPQ9Y6H5 919 aa8.41□□□□□ -1.06
RTFDC1-206ENST00000477485 TRIOBPQ9H2D6 2365 aa8.4□□□□□ -1.06
RTFDC1-206ENST00000477485 MAST3O60307 1309 aa8.4□□□□□ -1.06
RTFDC1-206ENST00000477485 BTBD19C9JJ37 291 aa8.4□□□□□ -1.06
RTFDC1-206ENST00000477485 IRF6O14896 467 aa8.4□□□□□ -1.06
RTFDC1-206ENST00000477485 TCP10Q12799 353 aa8.4□□□□□ -1.06
RTFDC1-206ENST00000477485 PPIL2Q13356 520 aa8.4□□□□□ -1.06
RTFDC1-206ENST00000477485 LRRC24Q50LG9 513 aa8.4□□□□□ -1.06
RTFDC1-206ENST00000477485 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.4□□□□□ -1.06
RTFDC1-206ENST00000477485 ZNF341Q9BYN7 854 aa8.4□□□□□ -1.06
RTFDC1-206ENST00000477485 PTPRFP10586 1907 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms