RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TRAPPC3LQ5T215 181 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 C8orf58Q8NAV2 365 aa20.95■□□□□ 0.94
VARS2-209ENST00000477288 CWF19L2Q2TBE0 894 aaKnown RBP20.94■□□□□ 0.94
VARS2-209ENST00000477288 NOD1Q9Y239 953 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 SPTLC2O15270 562 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 KARSQ15046 597 aaKnown RBP20.94■□□□□ 0.94
VARS2-209ENST00000477288 CFAP157Q5JU67 520 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 CCDC42Q96M95 316 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 TTC14Q96N46 770 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 GUCA1BQ9UMX6 200 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 TLDC2A0PJX2 215 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 BICDL2A1A5D9 508 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 PARP1P09874 1014 aaKnown RBP20.94■□□□□ 0.94
VARS2-209ENST00000477288 MAK16Q9BXY0 300 aaKnown RBP20.94■□□□□ 0.94
VARS2-209ENST00000477288 KRT83P78385 493 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 ARHGAP45Q92619 1136 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 RASA3Q14644 834 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 PPP1R9BQ96SB3 815 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 DACT1Q9NYF0 836 aa20.94■□□□□ 0.94
VARS2-209ENST00000477288 ZKSCAN3Q9BRR0 538 aa20.93■□□□□ 0.94
VARS2-209ENST00000477288 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.93■□□□□ 0.946e-8■■■■□ 19.5
VARS2-209ENST00000477288 V9GYY5 206 aaPredicted RBP20.93■□□□□ 0.94
VARS2-209ENST00000477288 ITSN2Q9NZM3 1697 aa20.93■□□□□ 0.94
VARS2-209ENST00000477288 DNAJC21Q5F1R6 531 aaKnown RBP20.93■□□□□ 0.94
VARS2-209ENST00000477288 UHRF1BP1LA0JNW5 1464 aa20.93■□□□□ 0.94
VARS2-209ENST00000477288 EIF4A2Q14240 407 aaKnown RBP20.93■□□□□ 0.94
VARS2-209ENST00000477288 DCAF17Q5H9S7 520 aaPredicted RBP20.93■□□□□ 0.94
VARS2-209ENST00000477288 PICK1Q9NRD5 415 aa20.93■□□□□ 0.94
VARS2-209ENST00000477288 DTHD1Q6ZMT9 781 aa20.93■□□□□ 0.94
VARS2-209ENST00000477288 KRT222Q8N1A0 295 aa20.93■□□□□ 0.94
VARS2-209ENST00000477288 TRAPPC8Q9Y2L5 1435 aa20.93■□□□□ 0.94
VARS2-209ENST00000477288 MTHFSDQ2M296 383 aaKnown RBP20.92■□□□□ 0.94
VARS2-209ENST00000477288 DNM1Q05193 864 aaKnown RBP20.92■□□□□ 0.94
VARS2-209ENST00000477288 RAPGEF1Q13905 1077 aa20.92■□□□□ 0.94
VARS2-209ENST00000477288 KLHL40Q2TBA0 621 aa20.92■□□□□ 0.94
VARS2-209ENST00000477288 KIAA1524Q8TCG1 905 aa20.92■□□□□ 0.94
VARS2-209ENST00000477288 KRT86O43790 486 aa20.92■□□□□ 0.94
VARS2-209ENST00000477288 MRPL50Q8N5N7 158 aaKnown RBP20.92■□□□□ 0.94
VARS2-209ENST00000477288 GPCPD1Q9NPB8 672 aa20.92■□□□□ 0.94
VARS2-209ENST00000477288 MAPKBP1O60336 1514 aa20.92■□□□□ 0.94
VARS2-209ENST00000477288 TMOD4Q9NZQ9 345 aa20.92■□□□□ 0.94
VARS2-209ENST00000477288 PRAG1Q86YV5 1406 aa20.92■□□□□ 0.94
VARS2-209ENST00000477288 ATP2A2P16615 1042 aaKnown RBP20.92■□□□□ 0.94
VARS2-209ENST00000477288 CCDC121Q6ZUS5 278 aa20.92■□□□□ 0.94
VARS2-209ENST00000477288 ANKRD44Q8N8A2 993 aa20.92■□□□□ 0.94
VARS2-209ENST00000477288 SH2D4AQ9H788 454 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 LZTFL1Q9NQ48 299 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 KRT5P13647 590 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 UAP1Q16222 522 aaPredicted RBP20.91■□□□□ 0.94
VARS2-209ENST00000477288 TTC6Q86TZ1 520 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 PRIMPOLQ96LW4 560 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 TBC1D32Q96NH3 1257 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 ZRANB1Q9UGI0 708 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 TEX14Q8IWB6 1497 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 UFL1O94874 794 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 CCDC14Q49A88 953 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 TEX11Q8IYF3 940 aa20.91■□□□□ 0.94
VARS2-209ENST00000477288 F13A1P00488 732 aa20.9■□□□□ 0.94
VARS2-209ENST00000477288 GOLGA1Q92805 767 aa20.9■□□□□ 0.94
VARS2-209ENST00000477288 CHMP2AO43633 222 aa20.9■□□□□ 0.94
VARS2-209ENST00000477288 NOL3O60936 208 aaKnown RBP20.9■□□□□ 0.94
VARS2-209ENST00000477288 HDAC1Q13547 482 aaPredicted RBP20.9■□□□□ 0.94
VARS2-209ENST00000477288 SEC62Q99442 399 aaKnown RBP20.9■□□□□ 0.94
VARS2-209ENST00000477288 ZEB2O60315 1214 aa20.9■□□□□ 0.94
VARS2-209ENST00000477288 BIRC3Q13489 604 aa20.9■□□□□ 0.94
VARS2-209ENST00000477288 ZMYND15Q9H091 742 aa20.9■□□□□ 0.94
VARS2-209ENST00000477288 CNBD1Q8NA66 436 aa20.9■□□□□ 0.94
VARS2-209ENST00000477288 LINS1Q8NG48 757 aa20.9■□□□□ 0.94
VARS2-209ENST00000477288 DYNC1I1O14576 645 aa20.89■□□□□ 0.94
VARS2-209ENST00000477288 NOLC1Q14978 699 aaKnown RBP eCLIP20.89■□□□□ 0.94
VARS2-209ENST00000477288 PPP1R21Q6ZMI0 780 aa20.89■□□□□ 0.94
VARS2-209ENST00000477288 CRCPO75575 148 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 GEN1Q17RS7 908 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 ZNF569Q5MCW4 686 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 PFDN4Q9NQP4 134 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 STK32BQ9NY57 414 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 RHOXF2BP0C7M4 288 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 MICALL1Q8N3F8 863 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 HAUS7Q99871 368 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 RHOXF2Q9BQY4 288 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 TRIM7Q9C029 511 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 FAM200AQ8TCP9 573 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 FNBP1Q96RU3 617 aa20.89■□□□□ 0.93
VARS2-209ENST00000477288 TCOF1Q13428 1488 aaKnown RBP20.89■□□□□ 0.93
VARS2-209ENST00000477288 EIF6P56537 245 aaKnown RBP20.88■□□□□ 0.93
VARS2-209ENST00000477288 CCDC65Q8IXS2 484 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 RBM28Q9NW13 759 aaKnown RBP20.88■□□□□ 0.93
VARS2-209ENST00000477288 MBD4O95243 580 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 CPLX4Q7Z7G2 160 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 FCHSD1Q86WN1 690 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 RNF34Q969K3 372 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 LETM2Q2VYF4 491 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 CCT6BQ92526 530 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 GAS8O95995 478 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 CEP57Q86XR8 500 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 DENND2AQ9ULE3 1009 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 FRMD4BQ9Y2L6 1034 aa20.88■□□□□ 0.93
VARS2-209ENST00000477288 KRT9P35527 623 aa20.87■□□□□ 0.93
VARS2-209ENST00000477288 ZYXQ15942 572 aaKnown RBP20.87■□□□□ 0.93
VARS2-209ENST00000477288 GPHNQ9NQX3 736 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms