RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 CEP126Q9P2H0 1117 aa13.91□□□□□ -0.18
PTPRN-213ENST00000476930 ZNF70Q9UC06 446 aaPredicted RBP13.91□□□□□ -0.18
PTPRN-213ENST00000476930 SERPINA10Q9UK55 444 aa13.91□□□□□ -0.18
PTPRN-213ENST00000476930 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
PTPRN-213ENST00000476930 HDAC5Q9UQL6 1122 aa13.91□□□□□ -0.18
PTPRN-213ENST00000476930 SRGAP3O43295 1099 aa13.9□□□□□ -0.18
PTPRN-213ENST00000476930 IL15P40933 162 aaPredicted RBP13.9□□□□□ -0.18
PTPRN-213ENST00000476930 RASA3Q14644 834 aa13.9□□□□□ -0.18
PTPRN-213ENST00000476930 ATP2B3Q16720 1220 aa13.9□□□□□ -0.18
PTPRN-213ENST00000476930 SPDYE2Q495Y8 402 aa13.9□□□□□ -0.18
PTPRN-213ENST00000476930 NBPF12Q5TAG4 269 aaPredicted RBP13.9□□□□□ -0.18
PTPRN-213ENST00000476930 ARMC9Q7Z3E5 817 aa13.9□□□□□ -0.18
PTPRN-213ENST00000476930 TMEM57Q8N5G2 664 aa13.9□□□□□ -0.18
PTPRN-213ENST00000476930 TBC1D22AQ8WUA7 517 aa13.9□□□□□ -0.18
PTPRN-213ENST00000476930 RNF186Q9NXI6 227 aa13.9□□□□□ -0.18
PTPRN-213ENST00000476930 ANGEL1Q9UNK9 670 aaKnown RBP13.9□□□□□ -0.18
PTPRN-213ENST00000476930 LAMB1P07942 1786 aa13.9□□□□□ -0.18
PTPRN-213ENST00000476930 TRPA1O75762 1119 aa13.89□□□□□ -0.19
PTPRN-213ENST00000476930 MKRN3Q13064 507 aaKnown RBP13.89□□□□□ -0.19
PTPRN-213ENST00000476930 LDLRAD1Q5T700 205 aa13.89□□□□□ -0.19
PTPRN-213ENST00000476930 ZKSCAN2Q63HK3 967 aa13.89□□□□□ -0.19
PTPRN-213ENST00000476930 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
PTPRN-213ENST00000476930 PPP2R3BQ9Y5P8 575 aa13.89□□□□□ -0.19
PTPRN-213ENST00000476930 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.89□□□□□ -0.19
PTPRN-213ENST00000476930 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
PTPRN-213ENST00000476930 TCP10L2B9ZVM9 353 aa13.88□□□□□ -0.19
PTPRN-213ENST00000476930 GNAI2P04899 355 aa13.88□□□□□ -0.19
PTPRN-213ENST00000476930 ADORA1P30542 326 aa13.88□□□□□ -0.19
PTPRN-213ENST00000476930 MTX1Q13505 466 aa13.88□□□□□ -0.19
PTPRN-213ENST00000476930 CDAN1Q8IWY9 1227 aa13.88□□□□□ -0.19
PTPRN-213ENST00000476930 MYO5AQ9Y4I1 1855 aaKnown RBP13.87□□□□□ -0.19
PTPRN-213ENST00000476930 PNMA6EA0A0J9YXQ4 647 aa13.87□□□□□ -0.19
PTPRN-213ENST00000476930 PHKA1P46020 1223 aa13.87□□□□□ -0.19
PTPRN-213ENST00000476930 CACNB3P54284 484 aa13.87□□□□□ -0.19
PTPRN-213ENST00000476930 TIMM10P62072 90 aa13.87□□□□□ -0.19
PTPRN-213ENST00000476930 HDLBPQ00341 1268 aaKnown RBP13.87□□□□□ -0.19
PTPRN-213ENST00000476930 MAP3K11Q16584 847 aa13.87□□□□□ -0.19
PTPRN-213ENST00000476930 SUPT20HL1Q3ZLR7 823 aa13.87□□□□□ -0.19
PTPRN-213ENST00000476930 TEKT1Q969V4 418 aa13.87□□□□□ -0.19
PTPRN-213ENST00000476930 CLMNQ96JQ2 1002 aa13.87□□□□□ -0.19
PTPRN-213ENST00000476930 PPP1R12BO60237 982 aaPredicted RBP13.86□□□□□ -0.19
PTPRN-213ENST00000476930 USP2O75604 605 aaPredicted RBP13.86□□□□□ -0.19
PTPRN-213ENST00000476930 RLBP1P12271 317 aa13.86□□□□□ -0.19
PTPRN-213ENST00000476930 TFCP2Q12800 502 aa13.86□□□□□ -0.19
PTPRN-213ENST00000476930 WDR66Q8TBY9 1149 aa13.86□□□□□ -0.19
PTPRN-213ENST00000476930 ZDHHC15Q96MV8 337 aa13.86□□□□□ -0.19
PTPRN-213ENST00000476930 TEPSINQ96N21 525 aa13.86□□□□□ -0.19
PTPRN-213ENST00000476930 TMEM39BQ9GZU3 492 aa13.86□□□□□ -0.19
PTPRN-213ENST00000476930 SAGE1Q9NXZ1 904 aa13.86□□□□□ -0.19
PTPRN-213ENST00000476930 SUGT1Q9Y2Z0 365 aa13.86□□□□□ -0.19
PTPRN-213ENST00000476930 CENPFP49454 3210 aa13.85□□□□□ -0.19
PTPRN-213ENST00000476930 TNFAIP1Q13829 316 aa13.85□□□□□ -0.19
PTPRN-213ENST00000476930 SPRYD7Q5W111 196 aa13.85□□□□□ -0.19
PTPRN-213ENST00000476930 CCDC102BQ68D86 513 aa13.85□□□□□ -0.19
PTPRN-213ENST00000476930 APOBEC3HQ6NTF7 200 aaKnown RBP13.85□□□□□ -0.19
PTPRN-213ENST00000476930 REM2Q8IYK8 340 aaPredicted RBP13.85□□□□□ -0.19
PTPRN-213ENST00000476930 MRIQ9BWK5 157 aa13.85□□□□□ -0.19
PTPRN-213ENST00000476930 A0A1B0GUL7 405 aa13.84□□□□□ -0.19
PTPRN-213ENST00000476930 PRDX5P30044 214 aa13.84□□□□□ -0.19
PTPRN-213ENST00000476930 TM4SF4P48230 202 aa13.84□□□□□ -0.19
PTPRN-213ENST00000476930 DIXDC1Q155Q3 683 aa13.84□□□□□ -0.19
PTPRN-213ENST00000476930 HHIPL2Q6UWX4 724 aa13.84□□□□□ -0.19
PTPRN-213ENST00000476930 SLC10A4Q96EP9 437 aa13.84□□□□□ -0.19
PTPRN-213ENST00000476930 XAGE2Q96GT9 111 aa13.84□□□□□ -0.19
PTPRN-213ENST00000476930 ABHD8Q96I13 439 aa13.84□□□□□ -0.19
PTPRN-213ENST00000476930 C1orf115Q9H7X2 142 aa13.84□□□□□ -0.19
PTPRN-213ENST00000476930 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
PTPRN-213ENST00000476930 MAST3O60307 1309 aa13.84□□□□□ -0.19
PTPRN-213ENST00000476930 IREB2P48200 963 aaKnown RBP13.83□□□□□ -0.2
PTPRN-213ENST00000476930 TNNI2P48788 182 aa13.83□□□□□ -0.2
PTPRN-213ENST00000476930 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.2
PTPRN-213ENST00000476930 WNK4Q96J92 1243 aa13.83□□□□□ -0.2
PTPRN-213ENST00000476930 DENND2AQ9ULE3 1009 aa13.83□□□□□ -0.2
PTPRN-213ENST00000476930 SEMA3EO15041 775 aa13.82□□□□□ -0.2
PTPRN-213ENST00000476930 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
PTPRN-213ENST00000476930 TBC1D8O95759 1140 aa13.82□□□□□ -0.2
PTPRN-213ENST00000476930 LDHBP07195 334 aaKnown RBP13.82□□□□□ -0.2
PTPRN-213ENST00000476930 GJA5P36382 358 aa13.82□□□□□ -0.2
PTPRN-213ENST00000476930 RASGRF1Q13972 1273 aa13.82□□□□□ -0.2
PTPRN-213ENST00000476930 ITPRIPQ8IWB1 547 aa13.82□□□□□ -0.2
PTPRN-213ENST00000476930 NEUROD6Q96NK8 337 aa13.82□□□□□ -0.2
PTPRN-213ENST00000476930 MCOLN1Q9GZU1 580 aa13.82□□□□□ -0.2
PTPRN-213ENST00000476930 AKAP2Q9Y2D5 859 aa13.82□□□□□ -0.2
PTPRN-213ENST00000476930 DAGLAQ9Y4D2 1042 aa13.82□□□□□ -0.2
PTPRN-213ENST00000476930 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
PTPRN-213ENST00000476930 DOCK2Q92608 1830 aa13.81□□□□□ -0.2
PTPRN-213ENST00000476930 ATP8B2P98198 1209 aa13.81□□□□□ -0.2
PTPRN-213ENST00000476930 G3BP1Q13283 466 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTPRN-213ENST00000476930 DGKZQ13574 1117 aa13.81□□□□□ -0.2
PTPRN-213ENST00000476930 POLA2Q14181 598 aa13.81□□□□□ -0.2
PTPRN-213ENST00000476930 CDC42EP5Q6NZY7 148 aa13.81□□□□□ -0.2
PTPRN-213ENST00000476930 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.81□□□□□ -0.2
PTPRN-213ENST00000476930 ANKRD13AQ8IZ07 590 aa13.81□□□□□ -0.2
PTPRN-213ENST00000476930 PANK1Q8TE04 598 aa13.81□□□□□ -0.2
PTPRN-213ENST00000476930 R3HDMLQ9H3Y0 253 aa13.81□□□□□ -0.2
PTPRN-213ENST00000476930 TMOD2Q9NZR1 351 aa13.81□□□□□ -0.2
PTPRN-213ENST00000476930 HTTP42858 3142 aa13.8□□□□□ -0.2
PTPRN-213ENST00000476930 UNCXA6NJT0 531 aa13.8□□□□□ -0.2
PTPRN-213ENST00000476930 ZBTB22O15209 634 aa13.8□□□□□ -0.2
PTPRN-213ENST00000476930 SREBF2Q12772 1141 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms