RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 FRAT2O75474 233 aaPredicted RBP17.54■□□□□ 0.4
SLC6A8-209ENST00000476466 TIMM10P62072 90 aa17.54■□□□□ 0.4
SLC6A8-209ENST00000476466 FKBP1BP68106 108 aa17.54■□□□□ 0.4
SLC6A8-209ENST00000476466 KIF23Q02241 960 aaPredicted RBP17.54■□□□□ 0.4
SLC6A8-209ENST00000476466 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
SLC6A8-209ENST00000476466 PRDM10Q9NQV6 1147 aa17.54■□□□□ 0.4
SLC6A8-209ENST00000476466 ZNF70Q9UC06 446 aaPredicted RBP17.54■□□□□ 0.4
SLC6A8-209ENST00000476466 OTOFQ9HC10 1997 aa17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 HTTP42858 3142 aa17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 A0A1B0GUL7 405 aa17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 PRDX5P30044 214 aa17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 CACNB3P54284 484 aa17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 POLA2Q14181 598 aa17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 NBPF12Q5TAG4 269 aaPredicted RBP17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 FTSJ3Q8IY81 847 aaKnown RBP17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 TBC1D22AQ8WUA7 517 aa17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
SLC6A8-209ENST00000476466 RASGRF1Q13972 1273 aa17.52■□□□□ 0.4
SLC6A8-209ENST00000476466 RASA3Q14644 834 aa17.52■□□□□ 0.4
SLC6A8-209ENST00000476466 DIXDC1Q155Q3 683 aa17.52■□□□□ 0.4
SLC6A8-209ENST00000476466 CCDC102BQ68D86 513 aa17.52■□□□□ 0.4
SLC6A8-209ENST00000476466 APOBEC3HQ6NTF7 200 aaKnown RBP17.52■□□□□ 0.4
SLC6A8-209ENST00000476466 TNS4Q8IZW8 715 aa17.52■□□□□ 0.4
SLC6A8-209ENST00000476466 TEPSINQ96N21 525 aa17.52■□□□□ 0.4
SLC6A8-209ENST00000476466 TTLL12Q14166 644 aaPredicted RBP17.51■□□□□ 0.39
SLC6A8-209ENST00000476466 LDLRAD1Q5T700 205 aa17.51■□□□□ 0.39
SLC6A8-209ENST00000476466 SSH3Q8TE77 659 aa17.51■□□□□ 0.39
SLC6A8-209ENST00000476466 CCDC102AQ96A19 550 aa17.51■□□□□ 0.39
SLC6A8-209ENST00000476466 XAGE2Q96GT9 111 aa17.51■□□□□ 0.39
SLC6A8-209ENST00000476466 TCP10L2B9ZVM9 353 aa17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 MYO1BO43795 1136 aa17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 MKRN3Q13064 507 aaKnown RBP17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 PI16Q6UXB8 463 aa17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 TEKT1Q969V4 418 aa17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 CLMNQ96JQ2 1002 aa17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 ZDHHC15Q96MV8 337 aa17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 CSRNP1Q96S65 589 aa17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 TMEM39BQ9GZU3 492 aa17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 ANGEL1Q9UNK9 670 aaKnown RBP17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 PPP2R3BQ9Y5P8 575 aa17.5■□□□□ 0.39
SLC6A8-209ENST00000476466 HDLBPQ00341 1268 aaKnown RBP17.49■□□□□ 0.39
SLC6A8-209ENST00000476466 WDR66Q8TBY9 1149 aa17.49■□□□□ 0.39
SLC6A8-209ENST00000476466 SUGT1Q9Y2Z0 365 aa17.49■□□□□ 0.39
SLC6A8-209ENST00000476466 DAGLAQ9Y4D2 1042 aa17.49■□□□□ 0.39
SLC6A8-209ENST00000476466 NF2P35240 595 aa17.48■□□□□ 0.39
SLC6A8-209ENST00000476466 ATP8B2P98198 1209 aa17.48■□□□□ 0.39
SLC6A8-209ENST00000476466 MAP3K11Q16584 847 aa17.48■□□□□ 0.39
SLC6A8-209ENST00000476466 CEP85Q6P2H3 762 aa17.48■□□□□ 0.39
SLC6A8-209ENST00000476466 CENPFP49454 3210 aa17.48■□□□□ 0.39
SLC6A8-209ENST00000476466 SALL1Q9NSC2 1324 aa17.47■□□□□ 0.39
SLC6A8-209ENST00000476466 ZBTB22O15209 634 aa17.47■□□□□ 0.39
SLC6A8-209ENST00000476466 HHIPL2Q6UWX4 724 aa17.47■□□□□ 0.39
SLC6A8-209ENST00000476466 ZNF384Q8TF68 577 aa17.47■□□□□ 0.39
SLC6A8-209ENST00000476466 BEGAINQ9BUH8 593 aa17.47■□□□□ 0.39
SLC6A8-209ENST00000476466 CASP8AP2Q9UKL3 1982 aa17.47■□□□□ 0.39
SLC6A8-209ENST00000476466 USP2O75604 605 aaPredicted RBP17.46■□□□□ 0.39
SLC6A8-209ENST00000476466 GJA5P36382 358 aa17.46■□□□□ 0.39
SLC6A8-209ENST00000476466 C20orf194Q5TEA3 1177 aa17.46■□□□□ 0.39
SLC6A8-209ENST00000476466 ARMC9Q7Z3E5 817 aa17.46■□□□□ 0.39
SLC6A8-209ENST00000476466 MRIQ9BWK5 157 aa17.46■□□□□ 0.39
SLC6A8-209ENST00000476466 RNF186Q9NXI6 227 aa17.46■□□□□ 0.39
SLC6A8-209ENST00000476466 RCAN3Q9UKA8 241 aa17.46■□□□□ 0.39
SLC6A8-209ENST00000476466 DENND2AQ9ULE3 1009 aa17.46■□□□□ 0.39
SLC6A8-209ENST00000476466 MAST3O60307 1309 aa17.46■□□□□ 0.38
SLC6A8-209ENST00000476466 LAMB1P07942 1786 aa17.45■□□□□ 0.38
SLC6A8-209ENST00000476466 SEMA3EO15041 775 aa17.45■□□□□ 0.38
SLC6A8-209ENST00000476466 NFIAQ12857 509 aa17.45■□□□□ 0.38
SLC6A8-209ENST00000476466 G3BP1Q13283 466 aaKnown RBP eCLIP17.45■□□□□ 0.38
SLC6A8-209ENST00000476466 NEUROD6Q96NK8 337 aa17.45■□□□□ 0.38
SLC6A8-209ENST00000476466 GNL3LQ9NVN8 582 aaKnown RBP17.45■□□□□ 0.38
SLC6A8-209ENST00000476466 TLR7Q9NYK1 1049 aaKnown RBP17.45■□□□□ 0.38
SLC6A8-209ENST00000476466 HMG20BQ9P0W2 317 aa17.45■□□□□ 0.38
SLC6A8-209ENST00000476466 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.45■□□□□ 0.38
SLC6A8-209ENST00000476466 AKAP11Q9UKA4 1901 aa17.45■□□□□ 0.38
SLC6A8-209ENST00000476466 RFX7Q2KHR2 1363 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 CA12O43570 354 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 TRPA1O75762 1119 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 LDHBP07195 334 aaKnown RBP17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 MCAMP43121 646 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 TNFAIP1Q13829 316 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 TNNI3KQ59H18 835 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 SPRYD7Q5W111 196 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 CDC42EP5Q6NZY7 148 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 AKAP2Q9Y2D5 859 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 COG6Q9Y2V7 657 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 NOP58Q9Y2X3 529 aaKnown RBP17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 FPGT-TNNI3KV9GXZ4 949 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 MYH2Q9UKX2 1941 aa17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 PDS5AQ29RF7 1337 aaKnown RBP17.44■□□□□ 0.38
SLC6A8-209ENST00000476466 SURF6O75683 361 aaKnown RBP17.43■□□□□ 0.38
SLC6A8-209ENST00000476466 CAPN15O75808 1086 aa17.43■□□□□ 0.38
SLC6A8-209ENST00000476466 ARID4AP29374 1257 aaPredicted RBP17.43■□□□□ 0.38
SLC6A8-209ENST00000476466 MVPQ14764 893 aaKnown RBP17.43■□□□□ 0.38
SLC6A8-209ENST00000476466 SUPT20HL1Q3ZLR7 823 aa17.43■□□□□ 0.38
SLC6A8-209ENST00000476466 CNKSR2Q8WXI2 1034 aa17.43■□□□□ 0.38
SLC6A8-209ENST00000476466 DBNDD2Q9BQY9 259 aa17.43■□□□□ 0.38
SLC6A8-209ENST00000476466 GAKO14976 1311 aa17.43■□□□□ 0.38
SLC6A8-209ENST00000476466 PPP1R12BO60237 982 aaPredicted RBP17.42■□□□□ 0.38
SLC6A8-209ENST00000476466 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms