RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 DLK2Q6UY11 383 aa25.77■■□□□ 1.72
MAP1LC3A-204ENST00000476428 PRMT6Q96LA8 375 aaPredicted RBP25.77■■□□□ 1.72
MAP1LC3A-204ENST00000476428 SERPINA10Q9UK55 444 aa25.77■■□□□ 1.72
MAP1LC3A-204ENST00000476428 PDS5AQ29RF7 1337 aaKnown RBP25.77■■□□□ 1.72
MAP1LC3A-204ENST00000476428 SALL1Q9NSC2 1324 aa25.77■■□□□ 1.72
MAP1LC3A-204ENST00000476428 SPDYE2BA6NHP3 402 aa25.76■■□□□ 1.71
MAP1LC3A-204ENST00000476428 SPDYE6P0CI01 402 aa25.76■■□□□ 1.71
MAP1LC3A-204ENST00000476428 CRKP46108 304 aa25.76■■□□□ 1.71
MAP1LC3A-204ENST00000476428 CLASRPQ8N2M8 674 aaKnown RBP25.76■■□□□ 1.71
MAP1LC3A-204ENST00000476428 ARAP2Q8WZ64 1704 aa25.75■■□□□ 1.71
MAP1LC3A-204ENST00000476428 ADM5C9JUS6 153 aa25.75■■□□□ 1.71
MAP1LC3A-204ENST00000476428 MCAMP43121 646 aa25.75■■□□□ 1.71
MAP1LC3A-204ENST00000476428 HDLBPQ00341 1268 aaKnown RBP25.75■■□□□ 1.71
MAP1LC3A-204ENST00000476428 AAMPQ13685 434 aa25.75■■□□□ 1.71
MAP1LC3A-204ENST00000476428 PI16Q6UXB8 463 aa25.75■■□□□ 1.71
MAP1LC3A-204ENST00000476428 SULF1Q8IWU6 871 aa25.75■■□□□ 1.71
MAP1LC3A-204ENST00000476428 SPATA5Q8NB90 893 aa25.75■■□□□ 1.71
MAP1LC3A-204ENST00000476428 MRIQ9BWK5 157 aa25.75■■□□□ 1.71
MAP1LC3A-204ENST00000476428 PITPNM2Q9BZ72 1349 aa25.74■■□□□ 1.71
MAP1LC3A-204ENST00000476428 PRDX5P30044 214 aa25.74■■□□□ 1.71
MAP1LC3A-204ENST00000476428 ZNF512BQ96KM6 892 aaPredicted RBP25.74■■□□□ 1.71
MAP1LC3A-204ENST00000476428 SCAF8Q9UPN6 1271 aaKnown RBP25.74■■□□□ 1.71
MAP1LC3A-204ENST00000476428 AOX1Q06278 1338 aa25.73■■□□□ 1.71
MAP1LC3A-204ENST00000476428 LDHBP07195 334 aaKnown RBP25.73■■□□□ 1.71
MAP1LC3A-204ENST00000476428 ZGPATQ8N5A5 531 aaKnown RBP25.73■■□□□ 1.71
MAP1LC3A-204ENST00000476428 BCL11AQ9H165 835 aa25.73■■□□□ 1.71
MAP1LC3A-204ENST00000476428 MAST3O60307 1309 aa25.72■■□□□ 1.71
MAP1LC3A-204ENST00000476428 TMEM88BA6NKF7 163 aa25.72■■□□□ 1.71
MAP1LC3A-204ENST00000476428 CST9Q5W186 159 aa25.72■■□□□ 1.71
MAP1LC3A-204ENST00000476428 TEKT1Q969V4 418 aa25.72■■□□□ 1.71
MAP1LC3A-204ENST00000476428 LRRCC1Q9C099 1032 aa25.72■■□□□ 1.71
MAP1LC3A-204ENST00000476428 SNRKQ9NRH2 765 aa25.72■■□□□ 1.71
MAP1LC3A-204ENST00000476428 ABCF2Q9UG63 623 aa25.72■■□□□ 1.71
MAP1LC3A-204ENST00000476428 CLRN2A0PK11 232 aa25.71■■□□□ 1.71
MAP1LC3A-204ENST00000476428 SMARCA5O60264 1052 aaPredicted RBP25.71■■□□□ 1.71
MAP1LC3A-204ENST00000476428 IFIT2P09913 472 aaKnown RBP25.71■■□□□ 1.71
MAP1LC3A-204ENST00000476428 HHIPL2Q6UWX4 724 aa25.71■■□□□ 1.71
MAP1LC3A-204ENST00000476428 TBC1D9Q6ZT07 1266 aa25.71■■□□□ 1.71
MAP1LC3A-204ENST00000476428 CREBZFQ9NS37 354 aa25.71■■□□□ 1.71
MAP1LC3A-204ENST00000476428 MYO1BO43795 1136 aa25.7■■□□□ 1.7
MAP1LC3A-204ENST00000476428 CELF2O95319 508 aaKnown RBP25.7■■□□□ 1.7
MAP1LC3A-204ENST00000476428 IRX6P78412 446 aaPredicted RBP25.7■■□□□ 1.7
MAP1LC3A-204ENST00000476428 SPTY2D1Q68D10 685 aaPredicted RBP25.7■■□□□ 1.7
MAP1LC3A-204ENST00000476428 DIXDC1Q155Q3 683 aa25.69■■□□□ 1.7
MAP1LC3A-204ENST00000476428 APOBEC3HQ6NTF7 200 aaKnown RBP25.69■■□□□ 1.7
MAP1LC3A-204ENST00000476428 ZDHHC15Q96MV8 337 aa25.69■■□□□ 1.7
MAP1LC3A-204ENST00000476428 TDRD3Q9H7E2 651 aaKnown RBP25.69■■□□□ 1.7
MAP1LC3A-204ENST00000476428 ZNF70Q9UC06 446 aaPredicted RBP25.69■■□□□ 1.7
MAP1LC3A-204ENST00000476428 MKRN1Q9UHC7 482 aaKnown RBP25.69■■□□□ 1.7
MAP1LC3A-204ENST00000476428 HDAC1Q13547 482 aaPredicted RBP25.68■■□□□ 1.7
MAP1LC3A-204ENST00000476428 SPDYE2Q495Y8 402 aa25.68■■□□□ 1.7
MAP1LC3A-204ENST00000476428 ERICH6Q7L0X2 663 aa25.68■■□□□ 1.7
MAP1LC3A-204ENST00000476428 APOBEC3FQ8IUX4 373 aaKnown RBP25.68■■□□□ 1.7
MAP1LC3A-204ENST00000476428 CDCA5Q96FF9 252 aa25.68■■□□□ 1.7
MAP1LC3A-204ENST00000476428 ZNF408Q9H9D4 720 aa25.68■■□□□ 1.7
MAP1LC3A-204ENST00000476428 ZAP70P43403 619 aa25.67■■□□□ 1.7
MAP1LC3A-204ENST00000476428 PRAMEF18Q5VWM3 479 aa25.67■■□□□ 1.7
MAP1LC3A-204ENST00000476428 VEZTQ9HBM0 779 aa25.67■■□□□ 1.7
MAP1LC3A-204ENST00000476428 CYP2E1P05181 493 aaPredicted RBP25.66■■□□□ 1.7
MAP1LC3A-204ENST00000476428 DAGLAQ9Y4D2 1042 aa25.66■■□□□ 1.7
MAP1LC3A-204ENST00000476428 DZIP1Q86YF9 867 aaKnown RBP25.65■■□□□ 1.7
MAP1LC3A-204ENST00000476428 MECOMQ03112 1051 aa25.64■■□□□ 1.7
MAP1LC3A-204ENST00000476428 DEFB129Q9H1M3 183 aa25.64■■□□□ 1.7
MAP1LC3A-204ENST00000476428 RAI14Q9P0K7 980 aa25.64■■□□□ 1.7
MAP1LC3A-204ENST00000476428 LRP2BPQ9P2M1 347 aa25.64■■□□□ 1.7
MAP1LC3A-204ENST00000476428 ZNF384Q8TF68 577 aa25.63■■□□□ 1.69
MAP1LC3A-204ENST00000476428 FAM163AQ96GL9 167 aaPredicted RBP25.63■■□□□ 1.69
MAP1LC3A-204ENST00000476428 PIH1D3Q9NQM4 214 aaKnown RBP25.63■■□□□ 1.69
MAP1LC3A-204ENST00000476428 ABT1Q9ULW3 272 aaKnown RBP25.63■■□□□ 1.69
MAP1LC3A-204ENST00000476428 NDUFB9Q9Y6M9 179 aa25.63■■□□□ 1.69
MAP1LC3A-204ENST00000476428 FOXN1O15353 648 aa25.62■■□□□ 1.69
MAP1LC3A-204ENST00000476428 SLF2Q8IX21 1173 aa25.62■■□□□ 1.69
MAP1LC3A-204ENST00000476428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.62■■□□□ 1.69
MAP1LC3A-204ENST00000476428 NSUN4Q96CB9 384 aaKnown RBP25.62■■□□□ 1.69
MAP1LC3A-204ENST00000476428 RWDD1Q9H446 243 aaPredicted RBP25.62■■□□□ 1.69
MAP1LC3A-204ENST00000476428 GAKO14976 1311 aa25.62■■□□□ 1.69
MAP1LC3A-204ENST00000476428 TCP10L2B9ZVM9 353 aa25.61■■□□□ 1.69
MAP1LC3A-204ENST00000476428 CACNB3P54284 484 aa25.61■■□□□ 1.69
MAP1LC3A-204ENST00000476428 RASA3Q14644 834 aa25.61■■□□□ 1.69
MAP1LC3A-204ENST00000476428 GBA2Q9HCG7 927 aaPredicted RBP25.61■■□□□ 1.69
MAP1LC3A-204ENST00000476428 TLL2Q9Y6L7 1015 aa25.61■■□□□ 1.69
MAP1LC3A-204ENST00000476428 IGHDP01880 384 aa25.6■■□□□ 1.69
MAP1LC3A-204ENST00000476428 CDC42EP5Q6NZY7 148 aa25.6■■□□□ 1.69
MAP1LC3A-204ENST00000476428 GCC1Q96CN9 775 aa25.6■■□□□ 1.69
MAP1LC3A-204ENST00000476428 ANTXR1Q9H6X2 564 aa25.6■■□□□ 1.69
MAP1LC3A-204ENST00000476428 PPP2R3BQ9Y5P8 575 aa25.6■■□□□ 1.69
MAP1LC3A-204ENST00000476428 MYH13Q9UKX3 1938 aa25.6■■□□□ 1.69
MAP1LC3A-204ENST00000476428 POLR2AP24928 1970 aaKnown RBP25.6■■□□□ 1.69
MAP1LC3A-204ENST00000476428 LDHCP07864 332 aa25.59■■□□□ 1.69
MAP1LC3A-204ENST00000476428 ATP5JP18859 108 aa25.59■■□□□ 1.69
MAP1LC3A-204ENST00000476428 GSTO1P78417 241 aa25.59■■□□□ 1.69
MAP1LC3A-204ENST00000476428 TNFAIP1Q13829 316 aa25.59■■□□□ 1.69
MAP1LC3A-204ENST00000476428 SAPCD2Q86UD0 394 aa25.59■■□□□ 1.69
MAP1LC3A-204ENST00000476428 C2orf69Q8N8R5 385 aa25.59■■□□□ 1.69
MAP1LC3A-204ENST00000476428 USP40Q9NVE5 1235 aa25.59■■□□□ 1.69
MAP1LC3A-204ENST00000476428 TMOD2Q9NZR1 351 aa25.59■■□□□ 1.69
MAP1LC3A-204ENST00000476428 RASSF10A6NK89 507 aa25.58■■□□□ 1.69
MAP1LC3A-204ENST00000476428 DEFB115Q30KQ5 88 aa25.58■■□□□ 1.69
MAP1LC3A-204ENST00000476428 ANKRD45Q5TZF3 282 aa25.58■■□□□ 1.69
MAP1LC3A-204ENST00000476428 BOLA2Q9H3K6 86 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms