RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 TEKT1Q969V4 418 aa17.74■□□□□ 0.43
ABCF3-211ENST00000475728 ASTN2O75129 1339 aaPredicted RBP17.73■□□□□ 0.43
ABCF3-211ENST00000475728 ADM5C9JUS6 153 aa17.73■□□□□ 0.43
ABCF3-211ENST00000475728 ARID4AP29374 1257 aaPredicted RBP17.73■□□□□ 0.43
ABCF3-211ENST00000475728 CRKP46108 304 aa17.73■□□□□ 0.43
ABCF3-211ENST00000475728 TTC39AQ5SRH9 613 aa17.73■□□□□ 0.43
ABCF3-211ENST00000475728 CLASRPQ8N2M8 674 aaKnown RBP17.73■□□□□ 0.43
ABCF3-211ENST00000475728 RHPN1Q8TCX5 695 aa17.73■□□□□ 0.43
ABCF3-211ENST00000475728 ABT1Q9ULW3 272 aaKnown RBP17.73■□□□□ 0.43
ABCF3-211ENST00000475728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.73■□□□□ 0.43
ABCF3-211ENST00000475728 CST9Q5W186 159 aa17.72■□□□□ 0.43
ABCF3-211ENST00000475728 HHIPL2Q6UWX4 724 aa17.72■□□□□ 0.43
ABCF3-211ENST00000475728 SLF2Q8IX21 1173 aa17.72■□□□□ 0.43
ABCF3-211ENST00000475728 SPATA5Q8NB90 893 aa17.72■□□□□ 0.43
ABCF3-211ENST00000475728 ZNF512BQ96KM6 892 aaPredicted RBP17.72■□□□□ 0.43
ABCF3-211ENST00000475728 DBNDD2Q9BQY9 259 aa17.72■□□□□ 0.43
ABCF3-211ENST00000475728 ZNF408Q9H9D4 720 aa17.72■□□□□ 0.43
ABCF3-211ENST00000475728 COL1A1P02452 1464 aaPredicted RBP17.71■□□□□ 0.43
ABCF3-211ENST00000475728 NF2P35240 595 aa17.71■□□□□ 0.43
ABCF3-211ENST00000475728 TNFAIP1Q13829 316 aa17.71■□□□□ 0.43
ABCF3-211ENST00000475728 AACSQ86V21 672 aa17.71■□□□□ 0.43
ABCF3-211ENST00000475728 C2orf69Q8N8R5 385 aa17.71■□□□□ 0.43
ABCF3-211ENST00000475728 CDCA5Q96FF9 252 aa17.71■□□□□ 0.43
ABCF3-211ENST00000475728 PRMT6Q96LA8 375 aaPredicted RBP17.71■□□□□ 0.43
ABCF3-211ENST00000475728 ZDHHC15Q96MV8 337 aa17.71■□□□□ 0.43
ABCF3-211ENST00000475728 PPP2R3BQ9Y5P8 575 aa17.71■□□□□ 0.43
ABCF3-211ENST00000475728 FMR1Q06787 632 aaKnown RBP eCLIP17.7■□□□□ 0.42
ABCF3-211ENST00000475728 GRIK5Q16478 980 aa17.7■□□□□ 0.42
ABCF3-211ENST00000475728 EAF2Q96CJ1 260 aaPredicted RBP17.7■□□□□ 0.42
ABCF3-211ENST00000475728 CRBNQ96SW2 442 aa17.7■□□□□ 0.42
ABCF3-211ENST00000475728 TMOD2Q9NZR1 351 aa17.7■□□□□ 0.42
ABCF3-211ENST00000475728 HMG20BQ9P0W2 317 aa17.7■□□□□ 0.42
ABCF3-211ENST00000475728 ABCF2Q9UG63 623 aa17.7■□□□□ 0.42
ABCF3-211ENST00000475728 TLL2Q9Y6L7 1015 aa17.7■□□□□ 0.42
ABCF3-211ENST00000475728 CNTNAP1P78357 1384 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 RASSF10A6NK89 507 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 APBB1O00213 710 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 IGSF3O75054 1194 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 IFIT2P09913 472 aaKnown RBP17.69■□□□□ 0.42
ABCF3-211ENST00000475728 PRDX5P30044 214 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 FKBP1BP68106 108 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 DEFB115Q30KQ5 88 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 SPDYE2Q495Y8 402 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 ERICH6Q7L0X2 663 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 DZIP1Q86YF9 867 aaKnown RBP17.69■□□□□ 0.42
ABCF3-211ENST00000475728 CCDC8Q9H0W5 538 aaPredicted RBP17.69■□□□□ 0.42
ABCF3-211ENST00000475728 VEZTQ9HBM0 779 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 GBA2Q9HCG7 927 aaPredicted RBP17.69■□□□□ 0.42
ABCF3-211ENST00000475728 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 PRDM10Q9NQV6 1147 aa17.69■□□□□ 0.42
ABCF3-211ENST00000475728 DBNLQ9UJU6 430 aaKnown RBP17.69■□□□□ 0.42
ABCF3-211ENST00000475728 CLRN2A0PK11 232 aa17.68■□□□□ 0.42
ABCF3-211ENST00000475728 TNNI2P48788 182 aa17.68■□□□□ 0.42
ABCF3-211ENST00000475728 HHIPL1Q96JK4 782 aa17.68■□□□□ 0.42
ABCF3-211ENST00000475728 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
ABCF3-211ENST00000475728 DEFB129Q9H1M3 183 aa17.68■□□□□ 0.42
ABCF3-211ENST00000475728 ZNF70Q9UC06 446 aaPredicted RBP17.68■□□□□ 0.42
ABCF3-211ENST00000475728 PCDHAC2Q9Y5I4 1007 aa17.68■□□□□ 0.42
ABCF3-211ENST00000475728 MYH13Q9UKX3 1938 aa17.68■□□□□ 0.42
ABCF3-211ENST00000475728 TRPM7Q96QT4 1865 aa17.67■□□□□ 0.42
ABCF3-211ENST00000475728 ECE1P42892 770 aa17.67■□□□□ 0.42
ABCF3-211ENST00000475728 MCAMP43121 646 aa17.67■□□□□ 0.42
ABCF3-211ENST00000475728 GSTO1P78417 241 aa17.67■□□□□ 0.42
ABCF3-211ENST00000475728 SAPCD2Q86UD0 394 aa17.67■□□□□ 0.42
ABCF3-211ENST00000475728 DCTPP1Q9H773 170 aa17.67■□□□□ 0.42
ABCF3-211ENST00000475728 TDRD3Q9H7E2 651 aaKnown RBP17.67■□□□□ 0.42
ABCF3-211ENST00000475728 LDHCP07864 332 aa17.66■□□□□ 0.42
ABCF3-211ENST00000475728 SUPT20HL1Q3ZLR7 823 aa17.66■□□□□ 0.42
ABCF3-211ENST00000475728 FKBP1CQ5VVH2 108 aa17.66■□□□□ 0.42
ABCF3-211ENST00000475728 TLR7Q9NYK1 1049 aaKnown RBP17.66■□□□□ 0.42
ABCF3-211ENST00000475728 LRP2BPQ9P2M1 347 aa17.66■□□□□ 0.42
ABCF3-211ENST00000475728 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
ABCF3-211ENST00000475728 CTCFP49711 727 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-211ENST00000475728 HUNKP57058 714 aa17.65■□□□□ 0.42
ABCF3-211ENST00000475728 APOBEC3HQ6NTF7 200 aaKnown RBP17.65■□□□□ 0.42
ABCF3-211ENST00000475728 DLK2Q6UY11 383 aa17.65■□□□□ 0.42
ABCF3-211ENST00000475728 FAM163AQ96GL9 167 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-211ENST00000475728 PCDH10Q9P2E7 1040 aa17.65■□□□□ 0.42
ABCF3-211ENST00000475728 DAGLAQ9Y4D2 1042 aa17.65■□□□□ 0.42
ABCF3-211ENST00000475728 PCDHB15Q9Y5E8 787 aa17.65■□□□□ 0.42
ABCF3-211ENST00000475728 LBX1P52954 281 aa17.64■□□□□ 0.41
ABCF3-211ENST00000475728 RASA3Q14644 834 aa17.64■□□□□ 0.41
ABCF3-211ENST00000475728 DIXDC1Q155Q3 683 aa17.64■□□□□ 0.41
ABCF3-211ENST00000475728 PI16Q6UXB8 463 aa17.64■□□□□ 0.41
ABCF3-211ENST00000475728 PAXIP1Q6ZW49 1069 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-211ENST00000475728 ARMC9Q7Z3E5 817 aa17.64■□□□□ 0.41
ABCF3-211ENST00000475728 AIDAQ96BJ3 306 aa17.64■□□□□ 0.41
ABCF3-211ENST00000475728 ABHD8Q96I13 439 aa17.64■□□□□ 0.41
ABCF3-211ENST00000475728 RAI14Q9P0K7 980 aa17.64■□□□□ 0.41
ABCF3-211ENST00000475728 GAKO14976 1311 aa17.64■□□□□ 0.41
ABCF3-211ENST00000475728 MAP4K4O95819 1239 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-211ENST00000475728 MECOMQ03112 1051 aa17.63■□□□□ 0.41
ABCF3-211ENST00000475728 TTLL12Q14166 644 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-211ENST00000475728 TMED8Q6PL24 325 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-211ENST00000475728 FAM83AQ86UY5 434 aa17.63■□□□□ 0.41
ABCF3-211ENST00000475728 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.63■□□□□ 0.41
ABCF3-211ENST00000475728 SNRKQ9NRH2 765 aa17.63■□□□□ 0.41
ABCF3-211ENST00000475728 SCAF8Q9UPN6 1271 aaKnown RBP17.63■□□□□ 0.41
ABCF3-211ENST00000475728 POLR2AP24928 1970 aaKnown RBP17.62■□□□□ 0.41
ABCF3-211ENST00000475728 TCP10L2B9ZVM9 353 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms