RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 CORO7P57737 925 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 MAP7D1Q3KQU3 841 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 SWT1Q5T5J6 900 aaKnown RBP13.04□□□□□ -0.32
U2AF1-209ENST00000475639 FAM184BQ9ULE4 1060 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 ADCY9O60503 1353 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 CWC27Q6UX04 472 aaKnown RBP13.04□□□□□ -0.32
U2AF1-209ENST00000475639 STXBP4Q6ZWJ1 553 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 C8orf76Q96K31 380 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 SRRTQ9BXP5 876 aaKnown RBP13.04□□□□□ -0.32
U2AF1-209ENST00000475639 SH2B1Q9NRF2 756 aaPredicted RBP13.04□□□□□ -0.32
U2AF1-209ENST00000475639 ABCF2Q9UG63 623 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 ASXL2Q76L83 1435 aa13.04□□□□□ -0.32
U2AF1-209ENST00000475639 RPS6KA5O75582 802 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 TUBB4AP04350 444 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 IDEP14735 1019 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 STX1AQ16623 288 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
U2AF1-209ENST00000475639 CARD10Q9BWT7 1032 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 DONSONQ9NYP3 566 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 HSF2BPO75031 334 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 KCNJ6P48051 423 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 CCDC40Q4G0X9 1142 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 NBPF6Q5VWK0 638 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 NBPF4Q96M43 638 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 ABCA9Q8IUA7 1624 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 RFC1P35251 1148 aaPredicted RBP13.03□□□□□ -0.32
U2AF1-209ENST00000475639 PSMC4P43686 418 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 SF3B2Q13435 895 aaKnown RBP13.03□□□□□ -0.32
U2AF1-209ENST00000475639 IMPACTQ9P2X3 320 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 PNMA6EA0A0J9YXQ4 647 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 CCDC194A0A1B0GVG4 234 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 ZFYP08048 801 aaPredicted RBP13.03□□□□□ -0.32
U2AF1-209ENST00000475639 MCTP2Q6DN12 878 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 APBB1IPQ7Z5R6 666 aaPredicted RBP13.03□□□□□ -0.32
U2AF1-209ENST00000475639 GPR161Q8N6U8 529 aaKnown RBP13.03□□□□□ -0.32
U2AF1-209ENST00000475639 CNNM3Q8NE01 707 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 JADE2Q9NQC1 790 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 VPS18Q9P253 973 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
U2AF1-209ENST00000475639 PRC1O43663 620 aa13.02□□□□□ -0.32
U2AF1-209ENST00000475639 CFAP58Q5T655 872 aa13.02□□□□□ -0.32
U2AF1-209ENST00000475639 WDR66Q8TBY9 1149 aa13.02□□□□□ -0.32
U2AF1-209ENST00000475639 PARD6BQ9BYG5 372 aa13.02□□□□□ -0.32
U2AF1-209ENST00000475639 TTC41PQ6P2S7 1318 aa13.02□□□□□ -0.32
U2AF1-209ENST00000475639 ATP2A1O14983 1001 aa13.02□□□□□ -0.33
U2AF1-209ENST00000475639 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.33
U2AF1-209ENST00000475639 TPD52P55327 224 aaPredicted RBP13.02□□□□□ -0.33
U2AF1-209ENST00000475639 CHMP4BP1P59074 171 aa13.02□□□□□ -0.33
U2AF1-209ENST00000475639 AMPD3Q01432 767 aa13.02□□□□□ -0.33
U2AF1-209ENST00000475639 MKNK2Q9HBH9 465 aa13.02□□□□□ -0.33
U2AF1-209ENST00000475639 TPCN1Q9ULQ1 816 aa13.02□□□□□ -0.33
U2AF1-209ENST00000475639 CPSF1Q10570 1443 aaKnown RBP13.02□□□□□ -0.33
U2AF1-209ENST00000475639 GNG11P61952 73 aa13.02□□□□□ -0.33
U2AF1-209ENST00000475639 CNPY4Q8N129 248 aa13.02□□□□□ -0.33
U2AF1-209ENST00000475639 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.33
U2AF1-209ENST00000475639 HECW2Q9P2P5 1572 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 MAP2K7O14733 419 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 IQCA1Q86XH1 822 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 AOPEPQ8N6M6 819 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 GOLIM4O00461 696 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 MYO1BO43795 1136 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 LONRF2Q1L5Z9 754 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 SPTY2D1Q68D10 685 aaPredicted RBP13.01□□□□□ -0.33
U2AF1-209ENST00000475639 MMS22LQ6ZRQ5 1243 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 ARFGAP2Q8N6H7 521 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 TCP11L1Q9NUJ3 509 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 F6X3S4 739 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 CPP00450 1065 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 NUTM2GQ5VZR2 741 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 DZIP1Q86YF9 867 aaKnown RBP13.01□□□□□ -0.33
U2AF1-209ENST00000475639 ANKS4BQ8N8V4 417 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 CAMSAP1Q5T5Y3 1602 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 ARHGEF28Q8N1W1 1705 aaKnown RBP13.01□□□□□ -0.33
U2AF1-209ENST00000475639 TMC6Q7Z403 805 aa13.01□□□□□ -0.33
U2AF1-209ENST00000475639 CRACR2BQ8N4Y2 399 aaPredicted RBP13.01□□□□□ -0.33
U2AF1-209ENST00000475639 ADGRL3Q9HAR2 1447 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 PPFIBP2Q8ND30 876 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 CUL5Q93034 780 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 ZSWIM6Q9HCJ5 1215 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 SETD1AO15047 1707 aaKnown RBP13□□□□□ -0.33
U2AF1-209ENST00000475639 ZFYVE9O95405 1425 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 GLRX3O76003 335 aaKnown RBP13□□□□□ -0.33
U2AF1-209ENST00000475639 COL9A3Q14050 684 aaPredicted RBP13□□□□□ -0.33
U2AF1-209ENST00000475639 RSRC2Q7L4I2 434 aaKnown RBP13□□□□□ -0.33
U2AF1-209ENST00000475639 CEP57Q86XR8 500 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 SPAG5Q96R06 1193 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 PDE11AQ9HCR9 933 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 SUFUQ9UMX1 484 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 IGHMBP2P38935 993 aaKnown RBP13□□□□□ -0.33
U2AF1-209ENST00000475639 UBA7P41226 1012 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 ABTB2Q8N961 1025 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 CCDC12Q8WUD4 166 aaPredicted RBP13□□□□□ -0.33
U2AF1-209ENST00000475639 PYM1Q9BRP8 204 aaKnown RBP13□□□□□ -0.33
U2AF1-209ENST00000475639 STMN4Q9H169 189 aaPredicted RBP13□□□□□ -0.33
U2AF1-209ENST00000475639 IL1RAPL2Q9NP60 686 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 HMGB1P1B2RPK0 211 aaPredicted RBP13□□□□□ -0.33
U2AF1-209ENST00000475639 EBAG9O00559 213 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 KIF5BP33176 963 aa13□□□□□ -0.33
U2AF1-209ENST00000475639 DNAJC21Q5F1R6 531 aaKnown RBP13□□□□□ -0.33
U2AF1-209ENST00000475639 XPO4Q9C0E2 1151 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms