RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 BRD7Q9NPI1 651 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 ZMYM5Q9UJ78 669 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 GJA3Q9Y6H8 435 aa6.78□□□□□ -1.32
SRGAP3-205ENST00000475560 GFRA3O60609 400 aa6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 CILPO75339 1184 aa6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 EIF3JO75822 258 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 POU3F3P20264 500 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 LMNB1P20700 586 aa6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 SSRP1Q08945 709 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 RPS26P11Q5JNZ5 115 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 LSRQ86X29 649 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 NCAPG2Q86XI2 1143 aa6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 RAVER1Q8IY67 606 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 ZNF669Q96BR6 464 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 TSEN34Q9BSV6 310 aaKnown RBP6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 FAM126AQ9BYI3 521 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 PRDM16Q9HAZ2 1276 aa6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 POLMQ9NP87 494 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-205ENST00000475560 A0A1B0GTH6 734 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 SPINT1O43278 529 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 KIF4AO95239 1232 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 CTSOP43234 321 aaPredicted RBP6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 KCNQ4P56696 695 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 RHBDL3P58872 404 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 CCINQ13939 588 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 TM4SF20Q53R12 229 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 PRICKLE2Q7Z3G6 844 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 KRT25Q7Z3Z0 450 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 REC114Q7Z4M0 266 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 DDX42Q86XP3 938 aaKnown RBP eCLIP6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 FAM178BQ8IXR5 827 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 MEIOBQ8N635 442 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 ZSWIM2Q8NEG5 633 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 SNIP1Q8TAD8 396 aaKnown RBP6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 SPOCK3Q9BQ16 436 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 GSX2Q9BZM3 304 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 TIMMDC1Q9NPL8 285 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 KCNH4Q9UQ05 1017 aa6.76□□□□□ -1.33
SRGAP3-205ENST00000475560 A0A096LPE4 126 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 A0A1W2PPZ6 126 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 METTL12A8MUP2 240 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 NRG2O14511 850 aaPredicted RBP6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 LCE2BO14633 110 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 TRPA1O75762 1119 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 ACPPP15309 386 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 BMP6P22004 513 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 SLC19A1P41440 591 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 FAAP100Q0VG06 881 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 BIRC2Q13490 618 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 COL13A1Q5TAT6 717 aaPredicted RBP6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 THNSL2Q86YJ6 484 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 CEP120Q8N960 986 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 CHAC2Q8WUX2 184 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 NINJ1Q92982 152 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 TSR2Q969E8 191 aaKnown RBP6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 RELTQ969Z4 430 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 EHMT1Q9H9B1 1298 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 TMEM39AQ9NV64 488 aa6.75□□□□□ -1.33
SRGAP3-205ENST00000475560 A0A1W2PQH9 124 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 B2RBV5 119 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 ALG1L2C9J202 215 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 FAM153BP0C7A2 387 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 MYCLP1P12525 358 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 HYAL2Q12891 473 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 SAMD5Q5TGI4 173 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 RASIP1Q5U651 963 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 DIEXFQ68CQ4 756 aaKnown RBP6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 C6orf15Q6UXA7 325 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 RUFY4Q6ZNE9 571 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 NIM1KQ8IY84 436 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 C19orf47Q8N9M1 422 aaKnown RBP6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 NXPE3Q969Y0 559 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 MFSD3Q96ES6 412 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 BHLHE41Q9C0J9 482 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 CAAP1Q9H8G2 361 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 GPN3Q9UHW5 284 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 CYP8B1Q9UNU6 501 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 SAMM50Q9Y512 469 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 WASHC2CQ9Y4E1 1318 aa6.74□□□□□ -1.33
SRGAP3-205ENST00000475560 A0A087X0B3 334 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 J3QL48 77 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 NFKBIEO00221 500 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 KIF3BO15066 747 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 RARAP10276 462 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 PMLP29590 882 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 STAT3P40763 770 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 NFKB2Q00653 900 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 NFE2Q16621 373 aaPredicted RBP6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 LONRF2Q1L5Z9 754 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 TMEM67Q5HYA8 995 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 PERM1Q5SV97 790 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 LYSMD3Q7Z3D4 306 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 NLRP8Q86W28 1048 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 TMEM102Q8N9M5 508 aaPredicted RBP6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 RPS6KC1Q96S38 1066 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 SPATA9Q9BWV2 254 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 CRISPLD1Q9H336 500 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 ZNF576Q9H609 170 aa6.73□□□□□ -1.33
SRGAP3-205ENST00000475560 TLR7Q9NYK1 1049 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms