RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 CSADQ9Y600 493 aa25.9■■□□□ 1.74
VPS36-203ENST00000475375 CACNA1FO60840 1977 aa25.89■■□□□ 1.74
VPS36-203ENST00000475375 TNNI2P48788 182 aa25.89■■□□□ 1.74
VPS36-203ENST00000475375 UBE4AQ14139 1066 aa25.89■■□□□ 1.74
VPS36-203ENST00000475375 CDAN1Q8IWY9 1227 aa25.89■■□□□ 1.74
VPS36-203ENST00000475375 BRI3BPQ8WY22 251 aa25.89■■□□□ 1.74
VPS36-203ENST00000475375 MS4A4AQ96JQ5 239 aa25.89■■□□□ 1.74
VPS36-203ENST00000475375 TMEM39BQ9GZU3 492 aa25.89■■□□□ 1.74
VPS36-203ENST00000475375 ZFYVE28Q9HCC9 887 aa25.89■■□□□ 1.74
VPS36-203ENST00000475375 OTOFQ9HC10 1997 aa25.88■■□□□ 1.73
VPS36-203ENST00000475375 CRKP46108 304 aa25.88■■□□□ 1.73
VPS36-203ENST00000475375 GTF2A2P52657 109 aa25.88■■□□□ 1.73
VPS36-203ENST00000475375 MAP3K9P80192 1104 aa25.88■■□□□ 1.73
VPS36-203ENST00000475375 CAP1Q01518 475 aa25.88■■□□□ 1.73
VPS36-203ENST00000475375 VGLL4Q14135 290 aa25.88■■□□□ 1.73
VPS36-203ENST00000475375 SLC4A10Q6U841 1118 aa25.88■■□□□ 1.73
VPS36-203ENST00000475375 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.88■■□□□ 1.73
VPS36-203ENST00000475375 VPS37DQ86XT2 251 aa25.88■■□□□ 1.73
VPS36-203ENST00000475375 OTUD5Q96G74 571 aa25.88■■□□□ 1.73
VPS36-203ENST00000475375 FAM84BQ96KN1 310 aaPredicted RBP25.88■■□□□ 1.73
VPS36-203ENST00000475375 SLC9C1Q4G0N8 1177 aa25.87■■□□□ 1.73
VPS36-203ENST00000475375 TEPSINQ96N21 525 aa25.87■■□□□ 1.73
VPS36-203ENST00000475375 NCBP3Q53F19 620 aaKnown RBP25.86■■□□□ 1.73
VPS36-203ENST00000475375 NBPF11Q86T75 865 aa25.86■■□□□ 1.73
VPS36-203ENST00000475375 WDR63Q8IWG1 891 aa25.86■■□□□ 1.73
VPS36-203ENST00000475375 IQSEC3Q9UPP2 1182 aaPredicted RBP25.86■■□□□ 1.73
VPS36-203ENST00000475375 FRAT2O75474 233 aaPredicted RBP25.85■■□□□ 1.73
VPS36-203ENST00000475375 WDHD1O75717 1129 aaPredicted RBP25.85■■□□□ 1.73
VPS36-203ENST00000475375 CHAF1AQ13111 956 aaPredicted RBP25.85■■□□□ 1.73
VPS36-203ENST00000475375 SLC4A8Q2Y0W8 1093 aa25.85■■□□□ 1.73
VPS36-203ENST00000475375 ZNF333Q96JL9 665 aa25.85■■□□□ 1.73
VPS36-203ENST00000475375 PUS3Q9BZE2 481 aaKnown RBP25.85■■□□□ 1.73
VPS36-203ENST00000475375 PTCH2Q9Y6C5 1203 aa25.85■■□□□ 1.73
VPS36-203ENST00000475375 RBBP6Q7Z6E9 1792 aaKnown RBP25.84■■□□□ 1.73
VPS36-203ENST00000475375 MYCP01106 439 aaPredicted RBP25.84■■□□□ 1.73
VPS36-203ENST00000475375 FAM43AQ8N2R8 423 aa25.84■■□□□ 1.73
VPS36-203ENST00000475375 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.84■■□□□ 1.73
VPS36-203ENST00000475375 SRCIN1Q9C0H9 1055 aa25.84■■□□□ 1.73
VPS36-203ENST00000475375 ALDH1L1O75891 902 aa25.83■■□□□ 1.73
VPS36-203ENST00000475375 MRS2Q9HD23 443 aa25.83■■□□□ 1.73
VPS36-203ENST00000475375 CACNB3P54284 484 aa25.82■■□□□ 1.72
VPS36-203ENST00000475375 SUCLG2Q96I99 432 aa25.82■■□□□ 1.72
VPS36-203ENST00000475375 MROH5Q6ZUA9 1318 aa25.82■■□□□ 1.72
VPS36-203ENST00000475375 KIF22Q14807 665 aa25.81■■□□□ 1.72
VPS36-203ENST00000475375 GRIK5Q16478 980 aa25.81■■□□□ 1.72
VPS36-203ENST00000475375 TEKT1Q969V4 418 aa25.81■■□□□ 1.72
VPS36-203ENST00000475375 TMOD2Q9NZR1 351 aa25.81■■□□□ 1.72
VPS36-203ENST00000475375 CETPP11597 493 aa25.8■■□□□ 1.72
VPS36-203ENST00000475375 CAVIN4Q5BKX8 364 aa25.8■■□□□ 1.72
VPS36-203ENST00000475375 TBC1D22AQ8WUA7 517 aa25.8■■□□□ 1.72
VPS36-203ENST00000475375 WRNIP1Q96S55 665 aa25.8■■□□□ 1.72
VPS36-203ENST00000475375 ARAP2Q8WZ64 1704 aa25.8■■□□□ 1.72
VPS36-203ENST00000475375 SPDYE5A6NIY4 337 aa25.79■■□□□ 1.72
VPS36-203ENST00000475375 METTL24Q5JXM2 366 aa25.79■■□□□ 1.72
VPS36-203ENST00000475375 RIPOR2Q9Y4F9 1068 aa25.79■■□□□ 1.72
VPS36-203ENST00000475375 FBXO33Q7Z6M2 555 aa25.78■■□□□ 1.72
VPS36-203ENST00000475375 ERO1BQ86YB8 467 aa25.78■■□□□ 1.72
VPS36-203ENST00000475375 HDLBPQ00341 1268 aaKnown RBP25.77■■□□□ 1.72
VPS36-203ENST00000475375 SNAPC2Q13487 334 aa25.77■■□□□ 1.72
VPS36-203ENST00000475375 SH3TC2Q8TF17 1288 aa25.77■■□□□ 1.72
VPS36-203ENST00000475375 ZKSCAN4Q969J2 545 aaPredicted RBP25.77■■□□□ 1.72
VPS36-203ENST00000475375 HOOK2Q96ED9 719 aa25.77■■□□□ 1.72
VPS36-203ENST00000475375 ARHGAP39Q9C0H5 1083 aa25.77■■□□□ 1.72
VPS36-203ENST00000475375 SPINK5Q9NQ38 1064 aaPredicted RBP25.77■■□□□ 1.72
VPS36-203ENST00000475375 SNCAIPQ9Y6H5 919 aa25.77■■□□□ 1.72
VPS36-203ENST00000475375 TLR2O60603 784 aa25.76■■□□□ 1.71
VPS36-203ENST00000475375 ECM2O94769 699 aaPredicted RBP25.76■■□□□ 1.71
VPS36-203ENST00000475375 NBPF7P0C2Y1 421 aaPredicted RBP25.76■■□□□ 1.71
VPS36-203ENST00000475375 KAZALD1Q96I82 304 aa25.76■■□□□ 1.71
VPS36-203ENST00000475375 BICC1Q9H694 974 aaKnown RBP25.76■■□□□ 1.71
VPS36-203ENST00000475375 BTBD19C9JJ37 291 aa25.75■■□□□ 1.71
VPS36-203ENST00000475375 LACTBP83111 547 aaPredicted RBP25.75■■□□□ 1.71
VPS36-203ENST00000475375 LRRC24Q50LG9 513 aa25.75■■□□□ 1.71
VPS36-203ENST00000475375 IRF6O14896 467 aa25.74■■□□□ 1.71
VPS36-203ENST00000475375 FXR1P51114 621 aaKnown RBP eCLIP25.74■■□□□ 1.71
VPS36-203ENST00000475375 ZDHHC15Q96MV8 337 aa25.74■■□□□ 1.71
VPS36-203ENST00000475375 MAST3O60307 1309 aa25.73■■□□□ 1.71
VPS36-203ENST00000475375 BCAMP50895 628 aa25.73■■□□□ 1.71
VPS36-203ENST00000475375 PPIL2Q13356 520 aa25.73■■□□□ 1.71
VPS36-203ENST00000475375 DCAF15Q66K64 600 aa25.73■■□□□ 1.71
VPS36-203ENST00000475375 FAM83AQ86UY5 434 aa25.73■■□□□ 1.71
VPS36-203ENST00000475375 ZCCHC17Q9NP64 241 aaKnown RBP25.73■■□□□ 1.71
VPS36-203ENST00000475375 COLQQ9Y215 455 aaPredicted RBP25.73■■□□□ 1.71
VPS36-203ENST00000475375 PDE8BO95263 885 aa25.71■■□□□ 1.71
VPS36-203ENST00000475375 MIGA2Q7L4E1 593 aa25.71■■□□□ 1.71
VPS36-203ENST00000475375 ZNF341Q9BYN7 854 aa25.71■■□□□ 1.71
VPS36-203ENST00000475375 GNRH1P01148 92 aa25.7■■□□□ 1.7
VPS36-203ENST00000475375 FKBP1CQ5VVH2 108 aa25.7■■□□□ 1.7
VPS36-203ENST00000475375 APOBEC3HQ6NTF7 200 aaKnown RBP25.7■■□□□ 1.7
VPS36-203ENST00000475375 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.7■■□□□ 1.7
VPS36-203ENST00000475375 UTYO14607 1347 aa25.69■■□□□ 1.7
VPS36-203ENST00000475375 IFIT1P09914 478 aaKnown RBP25.69■■□□□ 1.7
VPS36-203ENST00000475375 PRMT2P55345 433 aa25.69■■□□□ 1.7
VPS36-203ENST00000475375 RABL6Q3YEC7 729 aaPredicted RBP25.69■■□□□ 1.7
VPS36-203ENST00000475375 VGLL2Q8N8G2 317 aa25.69■■□□□ 1.7
VPS36-203ENST00000475375 KLHDC4Q8TBB5 520 aa25.69■■□□□ 1.7
VPS36-203ENST00000475375 MRIQ9BWK5 157 aa25.69■■□□□ 1.7
VPS36-203ENST00000475375 CPA4Q9UI42 421 aa25.69■■□□□ 1.7
VPS36-203ENST00000475375 SUGT1Q9Y2Z0 365 aa25.69■■□□□ 1.7
VPS36-203ENST00000475375 ZSWIM8A7E2V4 1837 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms