RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 FTSJ3Q8IY81 847 aaKnown RBP14.27□□□□□ -0.12
HLA-DOB-208ENST00000475235 YTHDC1Q96MU7 727 aaKnown RBP14.27□□□□□ -0.12
HLA-DOB-208ENST00000475235 CHRM1P11229 460 aaPredicted RBP14.26□□□□□ -0.13
HLA-DOB-208ENST00000475235 NF2P35240 595 aa14.26□□□□□ -0.13
HLA-DOB-208ENST00000475235 NOGQ13253 232 aa14.26□□□□□ -0.13
HLA-DOB-208ENST00000475235 CFAP100Q494V2 611 aa14.26□□□□□ -0.13
HLA-DOB-208ENST00000475235 RGMBQ6NW40 437 aa14.26□□□□□ -0.13
HLA-DOB-208ENST00000475235 TMEM57Q8N5G2 664 aa14.26□□□□□ -0.13
HLA-DOB-208ENST00000475235 CCDC102AQ96A19 550 aa14.26□□□□□ -0.13
HLA-DOB-208ENST00000475235 BEGAINQ9BUH8 593 aa14.26□□□□□ -0.13
HLA-DOB-208ENST00000475235 SERPINA10Q9UK55 444 aa14.26□□□□□ -0.13
HLA-DOB-208ENST00000475235 TRPM7Q96QT4 1865 aa14.26□□□□□ -0.13
HLA-DOB-208ENST00000475235 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 CTCFP49711 727 aaPredicted RBP14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 BCAMP50895 628 aa14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 RBM5P52756 815 aaKnown RBP eCLIP14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 ATP2B3Q16720 1220 aa14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 TTF2Q9UNY4 1162 aaKnown RBP14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 TNNQ9UQP3 1299 aa14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 PCNTO95613 3336 aa14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 ZNF646O15015 1829 aaPredicted RBP14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 COL1A1P02452 1464 aaPredicted RBP14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 FOXN1O15353 648 aa14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 CHAF1AQ13111 956 aaPredicted RBP14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 TEX2Q8IWB9 1127 aa14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 DZIP1LQ8IYY4 767 aaKnown RBP14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 IQSEC3Q9UPP2 1182 aaPredicted RBP14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 PA2G4Q9UQ80 394 aaKnown RBP14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 SUGT1Q9Y2Z0 365 aa14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 PPP2R3BQ9Y5P8 575 aa14.25□□□□□ -0.13
HLA-DOB-208ENST00000475235 THSD7BQ9C0I4 1608 aa14.24□□□□□ -0.13
HLA-DOB-208ENST00000475235 ZNF157P51786 506 aaPredicted RBP14.24□□□□□ -0.13
HLA-DOB-208ENST00000475235 IPO4Q8TEX9 1081 aaKnown RBP14.24□□□□□ -0.13
HLA-DOB-208ENST00000475235 PRMT6Q96LA8 375 aaPredicted RBP14.24□□□□□ -0.13
HLA-DOB-208ENST00000475235 GNL3LQ9NVN8 582 aaKnown RBP14.24□□□□□ -0.13
HLA-DOB-208ENST00000475235 SCAF8Q9UPN6 1271 aaKnown RBP14.24□□□□□ -0.13
HLA-DOB-208ENST00000475235 MAST3O60307 1309 aa14.23□□□□□ -0.13
HLA-DOB-208ENST00000475235 CA12O43570 354 aa14.23□□□□□ -0.13
HLA-DOB-208ENST00000475235 AOC2O75106 756 aa14.23□□□□□ -0.13
HLA-DOB-208ENST00000475235 HDLBPQ00341 1268 aaKnown RBP14.23□□□□□ -0.13
HLA-DOB-208ENST00000475235 WDR66Q8TBY9 1149 aa14.23□□□□□ -0.13
HLA-DOB-208ENST00000475235 DEFB129Q9H1M3 183 aa14.23□□□□□ -0.13
HLA-DOB-208ENST00000475235 AKAP2Q9Y2D5 859 aa14.23□□□□□ -0.13
HLA-DOB-208ENST00000475235 SEMA3EO15041 775 aa14.22□□□□□ -0.13
HLA-DOB-208ENST00000475235 MS4A1P11836 297 aa14.22□□□□□ -0.13
HLA-DOB-208ENST00000475235 CRKP46108 304 aa14.22□□□□□ -0.13
HLA-DOB-208ENST00000475235 TNFAIP1Q13829 316 aa14.22□□□□□ -0.13
HLA-DOB-208ENST00000475235 COL13A1Q5TAT6 717 aaPredicted RBP14.22□□□□□ -0.13
HLA-DOB-208ENST00000475235 TICAM2Q86XR7 235 aa14.22□□□□□ -0.13
HLA-DOB-208ENST00000475235 ITPRIPQ8IWB1 547 aa14.22□□□□□ -0.13
HLA-DOB-208ENST00000475235 PRDM10Q9NQV6 1147 aa14.22□□□□□ -0.13
HLA-DOB-208ENST00000475235 CLRN2A0PK11 232 aa14.21□□□□□ -0.13
HLA-DOB-208ENST00000475235 SLC10A3P09131 477 aa14.21□□□□□ -0.13
HLA-DOB-208ENST00000475235 TTLL12Q14166 644 aaPredicted RBP14.21□□□□□ -0.13
HLA-DOB-208ENST00000475235 PRAMEF18Q5VWM3 479 aa14.21□□□□□ -0.13
HLA-DOB-208ENST00000475235 TEKT1Q969V4 418 aa14.21□□□□□ -0.13
HLA-DOB-208ENST00000475235 MRIQ9BWK5 157 aa14.21□□□□□ -0.13
HLA-DOB-208ENST00000475235 VEZTQ9HBM0 779 aa14.21□□□□□ -0.13
HLA-DOB-208ENST00000475235 PCDHAC2Q9Y5I4 1007 aa14.21□□□□□ -0.13
HLA-DOB-208ENST00000475235 PAPPA2Q9BXP8 1791 aa14.21□□□□□ -0.13
HLA-DOB-208ENST00000475235 FAM155AB1AL88 458 aaPredicted RBP14.2□□□□□ -0.14
HLA-DOB-208ENST00000475235 SUPT20HL1Q3ZLR7 823 aa14.2□□□□□ -0.14
HLA-DOB-208ENST00000475235 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
HLA-DOB-208ENST00000475235 IFFO2Q5TF58 517 aa14.2□□□□□ -0.14
HLA-DOB-208ENST00000475235 ARMC9Q7Z3E5 817 aa14.2□□□□□ -0.14
HLA-DOB-208ENST00000475235 REM2Q8IYK8 340 aaPredicted RBP14.2□□□□□ -0.14
HLA-DOB-208ENST00000475235 DENND2AQ9ULE3 1009 aa14.2□□□□□ -0.14
HLA-DOB-208ENST00000475235 NAP1L2Q9ULW6 460 aaPredicted RBP14.2□□□□□ -0.14
HLA-DOB-208ENST00000475235 PNMA6EA0A0J9YXQ4 647 aa14.2□□□□□ -0.14
HLA-DOB-208ENST00000475235 G3BP1Q13283 466 aaKnown RBP eCLIP14.2□□□□□ -0.14
HLA-DOB-208ENST00000475235 A0A1B0GUL7 405 aa14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 ZBTB7BO15156 539 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 PPP1R12BO60237 982 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 HSPA8P11142 646 aaKnown RBP14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 RLBP1P12271 317 aa14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 TNNI2P48788 182 aa14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 LBX1P52954 281 aa14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 TFCP2Q12800 502 aa14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 RASA3Q14644 834 aa14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 MVPQ14764 893 aaKnown RBP14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 GRIK5Q16478 980 aa14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 RASAL3Q86YV0 1011 aa14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 ZDHHC15Q96MV8 337 aa14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 TDRD3Q9H7E2 651 aaKnown RBP14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 ZNF70Q9UC06 446 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOB-208ENST00000475235 SALL1Q9NSC2 1324 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 UBE2Q2LH0YL09 131 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 CLSTN1O94985 981 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 PHKA1P46020 1223 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 TIMM10P62072 90 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 ATP8B2P98198 1209 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 KIF23Q02241 960 aaPredicted RBP14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 CCDC102BQ68D86 513 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 HHIPL2Q6UWX4 724 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 MOB2Q70IA6 237 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 TNS4Q8IZW8 715 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 ZGPATQ8N5A5 531 aaKnown RBP14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 SSH3Q8TE77 659 aa14.18□□□□□ -0.14
HLA-DOB-208ENST00000475235 TMOD2Q9NZR1 351 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms