RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 C19orf57Q0VDD7 668 aa6.63□□□□□ -1.35
SDHB-204ENST00000475049 USP48Q86UV5 1035 aa6.63□□□□□ -1.35
SDHB-204ENST00000475049 TRIM56Q9BRZ2 755 aaKnown RBP6.63□□□□□ -1.35
SDHB-204ENST00000475049 CBX8Q9HC52 389 aa6.63□□□□□ -1.35
SDHB-204ENST00000475049 SAMM50Q9Y512 469 aa6.63□□□□□ -1.35
SDHB-204ENST00000475049 ENC1O14682 589 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 FSCN2O14926 492 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 ADAM23O75077 832 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 RLBP1P12271 317 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 NID1P14543 1247 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 GBP2P32456 591 aaPredicted RBP6.62□□□□□ -1.35
SDHB-204ENST00000475049 PWP1Q13610 501 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 ZNF394Q53GI3 561 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 METTL16Q86W50 562 aaKnown RBP6.62□□□□□ -1.35
SDHB-204ENST00000475049 ANKRD24Q8TF21 1146 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 TRIM11Q96F44 468 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 CCSER2Q9H7U1 834 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 COPRSQ9NQ92 184 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 KBTBD4Q9NVX7 518 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 NOP53Q9NZM5 478 aaKnown RBP6.62□□□□□ -1.35
SDHB-204ENST00000475049 PCDHGB7Q9Y5F8 929 aa6.62□□□□□ -1.35
SDHB-204ENST00000475049 MINDY4BA8MYZ0 360 aa6.61□□□□□ -1.35
SDHB-204ENST00000475049 PAGE1O75459 146 aa6.61□□□□□ -1.35
SDHB-204ENST00000475049 RAC1P63000 192 aa6.61□□□□□ -1.35
SDHB-204ENST00000475049 PCNX4Q63HM2 1172 aa6.61□□□□□ -1.35
SDHB-204ENST00000475049 HGSNATQ68CP4 663 aa6.61□□□□□ -1.35
SDHB-204ENST00000475049 TTBK2Q6IQ55 1244 aa6.61□□□□□ -1.35
SDHB-204ENST00000475049 SULF2Q8IWU5 870 aa6.61□□□□□ -1.35
SDHB-204ENST00000475049 WNT8BQ93098 351 aa6.61□□□□□ -1.35
SDHB-204ENST00000475049 SPDYE3A6NKU9 549 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 C1QTNF9BB2RNN3 333 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 NME2P22392 152 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 LIG3P49916 1009 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 ERMP1Q7Z2K6 904 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 CD163Q86VB7 1156 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 MAP4K3Q8IVH8 894 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 ZNF654Q8IZM8 581 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 KLHDC7BQ96G42 594 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 PLVAPQ9BX97 442 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 USP26Q9BXU7 913 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 SOX17Q9H6I2 414 aaPredicted RBP6.6□□□□□ -1.35
SDHB-204ENST00000475049 OSGEPQ9NPF4 335 aa6.6□□□□□ -1.35
SDHB-204ENST00000475049 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.6□□□□□ -1.35
SDHB-204ENST00000475049 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
SDHB-204ENST00000475049 CYP11A1P05108 521 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 ARNTP27540 789 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 NLRP12P59046 1061 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 AP3B2Q13367 1082 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 COL9A3Q14050 684 aaPredicted RBP6.59□□□□□ -1.35
SDHB-204ENST00000475049 SETDB1Q15047 1291 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 KLHL23Q8NBE8 558 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 KCNB2Q92953 911 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 TMEM74Q96NL1 305 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 CORO1BQ9BR76 489 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 RSRP1Q9BUV0 290 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 EMILIN2Q9BXX0 1053 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 ZC3H12CQ9C0D7 883 aaKnown RBP6.59□□□□□ -1.35
SDHB-204ENST00000475049 TGIF2Q9GZN2 237 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 SRA1Q9HD15 236 aaKnown RBP6.59□□□□□ -1.35
SDHB-204ENST00000475049 TLR6Q9Y2C9 796 aa6.59□□□□□ -1.35
SDHB-204ENST00000475049 CHRNA4P43681 627 aa6.58□□□□□ -1.36
SDHB-204ENST00000475049 TRIM28Q13263 835 aaKnown RBP6.58□□□□□ -1.36
SDHB-204ENST00000475049 LRRC14Q15048 493 aa6.58□□□□□ -1.36
SDHB-204ENST00000475049 POU4F3Q15319 338 aa6.58□□□□□ -1.36
SDHB-204ENST00000475049 DIEXFQ68CQ4 756 aaKnown RBP6.58□□□□□ -1.36
SDHB-204ENST00000475049 DTWD1Q8N5C7 304 aa6.58□□□□□ -1.36
SDHB-204ENST00000475049 GALNT11Q8NCW6 608 aa6.58□□□□□ -1.36
SDHB-204ENST00000475049 PHC3Q8NDX5 983 aa6.58□□□□□ -1.36
SDHB-204ENST00000475049 DCAF11Q8TEB1 546 aa6.58□□□□□ -1.36
SDHB-204ENST00000475049 ACBD3Q9H3P7 528 aa6.58□□□□□ -1.36
SDHB-204ENST00000475049 DDX41Q9UJV9 622 aaKnown RBP6.58□□□□□ -1.36
SDHB-204ENST00000475049 A0A0A0MRY4 1105 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 FAM229AH3BQW9 127 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 DDX3YO15523 660 aaKnown RBP6.57□□□□□ -1.36
SDHB-204ENST00000475049 DEAF1O75398 565 aaPredicted RBP6.57□□□□□ -1.36
SDHB-204ENST00000475049 BMP6P22004 513 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 MAOBP27338 520 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 CD68P34810 354 aaPredicted RBP6.57□□□□□ -1.36
SDHB-204ENST00000475049 ZC3H6P61129 1189 aaKnown RBP6.57□□□□□ -1.36
SDHB-204ENST00000475049 RACK1P63244 317 aaKnown RBP6.57□□□□□ -1.36
SDHB-204ENST00000475049 FAM160A1Q05DH4 1040 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 RAD51AP2Q09MP3 1159 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 PDE3AQ14432 1141 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 PRRT3Q5FWE3 981 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 SNAP47Q5SQN1 464 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 MAP1SQ66K74 1059 aaPredicted RBP6.57□□□□□ -1.36
SDHB-204ENST00000475049 LLGL2Q6P1M3 1020 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 STK35Q8TDR2 534 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 CAPN10Q9HC96 672 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 CYP8B1Q9UNU6 501 aa6.57□□□□□ -1.36
SDHB-204ENST00000475049 K7ELQ4 463 aaPredicted RBP6.56□□□□□ -1.36
SDHB-204ENST00000475049 PF4P02776 101 aa6.56□□□□□ -1.36
SDHB-204ENST00000475049 GSTP1P09211 210 aaKnown RBP6.56□□□□□ -1.36
SDHB-204ENST00000475049 SPATA31C1P0DKV0 1188 aa6.56□□□□□ -1.36
SDHB-204ENST00000475049 EIF4A3P38919 411 aaKnown RBP6.56□□□□□ -1.36
SDHB-204ENST00000475049 RPS26P62854 115 aaKnown RBP6.56□□□□□ -1.36
SDHB-204ENST00000475049 HNRNPUQ00839 825 aaKnown RBP eCLIP6.56□□□□□ -1.36
SDHB-204ENST00000475049 AGMOQ6ZNB7 445 aa6.56□□□□□ -1.36
SDHB-204ENST00000475049 FBXO11Q86XK2 927 aa6.56□□□□□ -1.36
SDHB-204ENST00000475049 FMR1NBQ8N0W7 255 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms