RNA–Protein interactions for RNA: ENST00000474916.1

CDK11A-214, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 752 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-214ENST00000474916 LDLRAD1Q5T700 205 aa20.53■□□□□ 0.88
CDK11A-214ENST00000474916 SERPINA10Q9UK55 444 aa20.53■□□□□ 0.88
CDK11A-214ENST00000474916 MYO1BO43795 1136 aa20.52■□□□□ 0.88
CDK11A-214ENST00000474916 FRAT2O75474 233 aaPredicted RBP20.52■□□□□ 0.88
CDK11A-214ENST00000474916 IFIT1P09914 478 aaKnown RBP20.52■□□□□ 0.88
CDK11A-214ENST00000474916 ARMC9Q7Z3E5 817 aa20.52■□□□□ 0.88
CDK11A-214ENST00000474916 FRAT1Q92837 279 aaPredicted RBP20.52■□□□□ 0.88
CDK11A-214ENST00000474916 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
CDK11A-214ENST00000474916 CLMNQ96JQ2 1002 aa20.52■□□□□ 0.88
CDK11A-214ENST00000474916 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.52■□□□□ 0.88
CDK11A-214ENST00000474916 LAMB1P07942 1786 aa20.51■□□□□ 0.87
CDK11A-214ENST00000474916 CIAO1O76071 339 aa20.51■□□□□ 0.87
CDK11A-214ENST00000474916 SLC5A1P13866 664 aa20.51■□□□□ 0.87
CDK11A-214ENST00000474916 CACNB3P54284 484 aa20.51■□□□□ 0.87
CDK11A-214ENST00000474916 LPIN2Q92539 896 aa20.51■□□□□ 0.87
CDK11A-214ENST00000474916 SAGE1Q9NXZ1 904 aa20.51■□□□□ 0.87
CDK11A-214ENST00000474916 TCP10L2B9ZVM9 353 aa20.5■□□□□ 0.87
CDK11A-214ENST00000474916 ADORA1P30542 326 aa20.5■□□□□ 0.87
CDK11A-214ENST00000474916 ATF7IPQ6VMQ6 1270 aa20.5■□□□□ 0.87
CDK11A-214ENST00000474916 TEPSINQ96N21 525 aa20.5■□□□□ 0.87
CDK11A-214ENST00000474916 MCOLN1Q9GZU1 580 aa20.5■□□□□ 0.87
CDK11A-214ENST00000474916 PPP2R3BQ9Y5P8 575 aa20.5■□□□□ 0.87
CDK11A-214ENST00000474916 MAP3K11Q16584 847 aa20.49■□□□□ 0.87
CDK11A-214ENST00000474916 ATP2B3Q16720 1220 aa20.49■□□□□ 0.87
CDK11A-214ENST00000474916 COPRSQ9NQ92 184 aa20.49■□□□□ 0.87
CDK11A-214ENST00000474916 USP2O75604 605 aaPredicted RBP20.48■□□□□ 0.87
CDK11A-214ENST00000474916 PHKA1P46020 1223 aa20.48■□□□□ 0.87
CDK11A-214ENST00000474916 SPRYD7Q5W111 196 aa20.48■□□□□ 0.87
CDK11A-214ENST00000474916 TBC1D22AQ8WUA7 517 aa20.48■□□□□ 0.87
CDK11A-214ENST00000474916 TMEM39BQ9GZU3 492 aa20.48■□□□□ 0.87
CDK11A-214ENST00000474916 CEP126Q9P2H0 1117 aa20.48■□□□□ 0.87
CDK11A-214ENST00000474916 TBC1D8O95759 1140 aa20.47■□□□□ 0.87
CDK11A-214ENST00000474916 GJA5P36382 358 aa20.47■□□□□ 0.87
CDK11A-214ENST00000474916 IL15P40933 162 aaPredicted RBP20.47■□□□□ 0.87
CDK11A-214ENST00000474916 DGKZQ13574 1117 aa20.47■□□□□ 0.87
CDK11A-214ENST00000474916 APOBEC3HQ6NTF7 200 aaKnown RBP20.47■□□□□ 0.87
CDK11A-214ENST00000474916 TMEM57Q8N5G2 664 aa20.47■□□□□ 0.87
CDK11A-214ENST00000474916 PCDH10Q9P2E7 1040 aa20.47■□□□□ 0.87
CDK11A-214ENST00000474916 FBXO3Q9UK99 471 aa20.47■□□□□ 0.87
CDK11A-214ENST00000474916 SRGAP3O43295 1099 aa20.46■□□□□ 0.87
CDK11A-214ENST00000474916 TM4SF4P48230 202 aa20.46■□□□□ 0.87
CDK11A-214ENST00000474916 TEKT1Q969V4 418 aa20.46■□□□□ 0.87
CDK11A-214ENST00000474916 R3HDMLQ9H3Y0 253 aa20.46■□□□□ 0.87
CDK11A-214ENST00000474916 MYH2Q9UKX2 1941 aa20.45■□□□□ 0.86
CDK11A-214ENST00000474916 PNMA6EA0A0J9YXQ4 647 aa20.45■□□□□ 0.86
CDK11A-214ENST00000474916 IPO8O15397 1037 aaKnown RBP20.45■□□□□ 0.86
CDK11A-214ENST00000474916 PPP1R12BO60237 982 aaPredicted RBP20.45■□□□□ 0.86
CDK11A-214ENST00000474916 GNAI3P08754 354 aa20.45■□□□□ 0.86
CDK11A-214ENST00000474916 PRDX5P30044 214 aa20.45■□□□□ 0.86
CDK11A-214ENST00000474916 TIMM10P62072 90 aa20.45■□□□□ 0.86
CDK11A-214ENST00000474916 HDLBPQ00341 1268 aaKnown RBP20.45■□□□□ 0.86
CDK11A-214ENST00000474916 MTX1Q13505 466 aa20.45■□□□□ 0.86
CDK11A-214ENST00000474916 SUPT20HL1Q3ZLR7 823 aa20.45■□□□□ 0.86
CDK11A-214ENST00000474916 WNK4Q96J92 1243 aa20.45■□□□□ 0.86
CDK11A-214ENST00000474916 ZDHHC15Q96MV8 337 aa20.45■□□□□ 0.86
CDK11A-214ENST00000474916 TFCP2Q12800 502 aa20.44■□□□□ 0.86
CDK11A-214ENST00000474916 DIXDC1Q155Q3 683 aa20.44■□□□□ 0.86
CDK11A-214ENST00000474916 REM2Q8IYK8 340 aaPredicted RBP20.44■□□□□ 0.86
CDK11A-214ENST00000474916 SLC10A4Q96EP9 437 aa20.44■□□□□ 0.86
CDK11A-214ENST00000474916 TNFAIP1Q13829 316 aa20.43■□□□□ 0.86
CDK11A-214ENST00000474916 CNKSR2Q8WXI2 1034 aa20.43■□□□□ 0.86
CDK11A-214ENST00000474916 RLBP1P12271 317 aa20.42■□□□□ 0.86
CDK11A-214ENST00000474916 ZKSCAN2Q63HK3 967 aa20.42■□□□□ 0.86
CDK11A-214ENST00000474916 CCDC102BQ68D86 513 aa20.42■□□□□ 0.86
CDK11A-214ENST00000474916 WDR66Q8TBY9 1149 aa20.42■□□□□ 0.86
CDK11A-214ENST00000474916 HDAC5Q9UQL6 1122 aa20.42■□□□□ 0.86
CDK11A-214ENST00000474916 SUGT1Q9Y2Z0 365 aa20.42■□□□□ 0.86
CDK11A-214ENST00000474916 DAGLAQ9Y4D2 1042 aa20.42■□□□□ 0.86
CDK11A-214ENST00000474916 AK9Q5TCS8 1911 aa20.42■□□□□ 0.86
CDK11A-214ENST00000474916 HTTP42858 3142 aa20.42■□□□□ 0.86
CDK11A-214ENST00000474916 A0A1B0GUL7 405 aa20.41■□□□□ 0.86
CDK11A-214ENST00000474916 GNAI2P04899 355 aa20.41■□□□□ 0.86
CDK11A-214ENST00000474916 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.41■□□□□ 0.86
CDK11A-214ENST00000474916 MRIQ9BWK5 157 aa20.41■□□□□ 0.86
CDK11A-214ENST00000474916 C1orf115Q9H7X2 142 aa20.41■□□□□ 0.86
CDK11A-214ENST00000474916 ELP3Q9H9T3 547 aa20.41■□□□□ 0.86
CDK11A-214ENST00000474916 IGF2BP3O00425 579 aaKnown RBP eCLIP20.4■□□□□ 0.86
CDK11A-214ENST00000474916 MAST3O60307 1309 aa20.4■□□□□ 0.86
CDK11A-214ENST00000474916 IREB2P48200 963 aaKnown RBP20.4■□□□□ 0.86
CDK11A-214ENST00000474916 RASGRF1Q13972 1273 aa20.4■□□□□ 0.86
CDK11A-214ENST00000474916 ZBED9Q6R2W3 1325 aa20.4■□□□□ 0.86
CDK11A-214ENST00000474916 HHIPL2Q6UWX4 724 aa20.4■□□□□ 0.86
CDK11A-214ENST00000474916 ZNF296Q8WUU4 475 aaPredicted RBP20.4■□□□□ 0.86
CDK11A-214ENST00000474916 XAGE2Q96GT9 111 aa20.4■□□□□ 0.86
CDK11A-214ENST00000474916 TNNI2P48788 182 aa20.39■□□□□ 0.85
CDK11A-214ENST00000474916 SREBF2Q12772 1141 aa20.39■□□□□ 0.85
CDK11A-214ENST00000474916 ANKRD13AQ8IZ07 590 aa20.39■□□□□ 0.85
CDK11A-214ENST00000474916 SALL1Q9NSC2 1324 aa20.38■□□□□ 0.85
CDK11A-214ENST00000474916 ZBTB48P10074 688 aaPredicted RBP20.38■□□□□ 0.85
CDK11A-214ENST00000474916 NFIAQ12857 509 aa20.38■□□□□ 0.85
CDK11A-214ENST00000474916 VGLL4Q14135 290 aa20.38■□□□□ 0.85
CDK11A-214ENST00000474916 CDC42EP5Q6NZY7 148 aa20.38■□□□□ 0.85
CDK11A-214ENST00000474916 IFNL1Q8IU54 200 aa20.38■□□□□ 0.85
CDK11A-214ENST00000474916 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.38■□□□□ 0.85
CDK11A-214ENST00000474916 PTPN18Q99952 460 aa20.38■□□□□ 0.85
CDK11A-214ENST00000474916 GNL3LQ9NVN8 582 aaKnown RBP20.38■□□□□ 0.85
CDK11A-214ENST00000474916 DENND2AQ9ULE3 1009 aa20.38■□□□□ 0.85
CDK11A-214ENST00000474916 MANSC4A6NHS7 340 aaPredicted RBP20.37■□□□□ 0.85
CDK11A-214ENST00000474916 GPR25O00155 361 aa20.37■□□□□ 0.85
CDK11A-214ENST00000474916 LDHBP07195 334 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms