RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 ABCF2Q9UG63 623 aa24.45■■□□□ 1.5
CDHR3-210ENST00000474330 ZNF532Q9HCE3 1301 aa24.45■■□□□ 1.5
CDHR3-210ENST00000474330 SALL1Q9NSC2 1324 aa24.45■■□□□ 1.5
CDHR3-210ENST00000474330 POTECB2RU33 542 aa24.44■■□□□ 1.5
CDHR3-210ENST00000474330 IGSF3O75054 1194 aa24.44■■□□□ 1.5
CDHR3-210ENST00000474330 CCDC129Q6ZRS4 1044 aa24.44■■□□□ 1.5
CDHR3-210ENST00000474330 MAGEB6Q8N7X4 407 aa24.44■■□□□ 1.5
CDHR3-210ENST00000474330 WDR66Q8TBY9 1149 aa24.44■■□□□ 1.5
CDHR3-210ENST00000474330 M0R2C6 588 aa24.43■■□□□ 1.5
CDHR3-210ENST00000474330 RIMBP2O15034 1052 aa24.43■■□□□ 1.5
CDHR3-210ENST00000474330 CHAF1AQ13111 956 aaPredicted RBP24.43■■□□□ 1.5
CDHR3-210ENST00000474330 PUS7LQ9H0K6 701 aaKnown RBP24.43■■□□□ 1.5
CDHR3-210ENST00000474330 CEP350Q5VT06 3117 aa24.43■■□□□ 1.5
CDHR3-210ENST00000474330 WDR90Q96KV7 1748 aa24.43■■□□□ 1.5
CDHR3-210ENST00000474330 ANAPC15P60006 121 aa24.43■■□□□ 1.5
CDHR3-210ENST00000474330 ZGPATQ8N5A5 531 aaKnown RBP24.43■■□□□ 1.5
CDHR3-210ENST00000474330 DPY19L2Q6NUT2 758 aa24.42■■□□□ 1.5
CDHR3-210ENST00000474330 ERICH6Q7L0X2 663 aa24.42■■□□□ 1.5
CDHR3-210ENST00000474330 IL17RAQ96F46 866 aa24.42■■□□□ 1.5
CDHR3-210ENST00000474330 DDRGK1Q96HY6 314 aa24.42■■□□□ 1.5
CDHR3-210ENST00000474330 RAI14Q9P0K7 980 aa24.42■■□□□ 1.5
CDHR3-210ENST00000474330 DDNO94850 711 aaPredicted RBP24.41■■□□□ 1.5
CDHR3-210ENST00000474330 NECTIN1Q15223 517 aa24.41■■□□□ 1.5
CDHR3-210ENST00000474330 TMED8Q6PL24 325 aaPredicted RBP24.41■■□□□ 1.5
CDHR3-210ENST00000474330 DSCC1Q9BVC3 393 aa24.41■■□□□ 1.5
CDHR3-210ENST00000474330 FZD9O00144 591 aa24.4■■□□□ 1.5
CDHR3-210ENST00000474330 SPTY2D1Q68D10 685 aaPredicted RBP24.4■■□□□ 1.5
CDHR3-210ENST00000474330 RBM8AQ9Y5S9 174 aaKnown RBP24.4■■□□□ 1.5
CDHR3-210ENST00000474330 FAM205AQ6ZU69 1335 aa24.39■■□□□ 1.5
CDHR3-210ENST00000474330 TOMM70O94826 608 aa24.39■■□□□ 1.5
CDHR3-210ENST00000474330 KIAA2012Q0VF49 1180 aa24.39■■□□□ 1.5
CDHR3-210ENST00000474330 PALD1Q9ULE6 856 aa24.39■■□□□ 1.5
CDHR3-210ENST00000474330 MAST2Q6P0Q8 1798 aa24.39■■□□□ 1.49
CDHR3-210ENST00000474330 ZNF541Q9H0D2 1346 aa24.39■■□□□ 1.49
CDHR3-210ENST00000474330 GPAA1O43292 621 aa24.39■■□□□ 1.49
CDHR3-210ENST00000474330 AOC3Q16853 763 aa24.39■■□□□ 1.49
CDHR3-210ENST00000474330 KCNB2Q92953 911 aa24.39■■□□□ 1.49
CDHR3-210ENST00000474330 IPO9Q96P70 1041 aaKnown RBP24.39■■□□□ 1.49
CDHR3-210ENST00000474330 G3V3G9 751 aa24.38■■□□□ 1.49
CDHR3-210ENST00000474330 PPIP5K2O43314 1243 aa24.38■■□□□ 1.49
CDHR3-210ENST00000474330 HSPD1P10809 573 aaKnown RBP24.38■■□□□ 1.49
CDHR3-210ENST00000474330 DCAF8Q5TAQ9 597 aa24.38■■□□□ 1.49
CDHR3-210ENST00000474330 NSUN4Q96CB9 384 aaKnown RBP24.38■■□□□ 1.49
CDHR3-210ENST00000474330 VPS33BQ9H267 617 aa24.38■■□□□ 1.49
CDHR3-210ENST00000474330 JAG2Q9Y219 1238 aa24.38■■□□□ 1.49
CDHR3-210ENST00000474330 U3KPZ7 1027 aaPredicted RBP24.38■■□□□ 1.49
CDHR3-210ENST00000474330 VEGFAP15692 232 aaPredicted RBP24.37■■□□□ 1.49
CDHR3-210ENST00000474330 CYP7A1P22680 504 aa24.37■■□□□ 1.49
CDHR3-210ENST00000474330 PRDX5P30044 214 aa24.37■■□□□ 1.49
CDHR3-210ENST00000474330 RABEP1Q15276 862 aa24.37■■□□□ 1.49
CDHR3-210ENST00000474330 VPS53Q5VIR6 699 aa24.37■■□□□ 1.49
CDHR3-210ENST00000474330 PODNQ7Z5L7 613 aa24.37■■□□□ 1.49
CDHR3-210ENST00000474330 TBC1D22AQ8WUA7 517 aa24.37■■□□□ 1.49
CDHR3-210ENST00000474330 PSME4Q14997 1843 aa24.37■■□□□ 1.49
CDHR3-210ENST00000474330 MECOMQ03112 1051 aa24.36■■□□□ 1.49
CDHR3-210ENST00000474330 NAA16Q6N069 864 aaPredicted RBP24.36■■□□□ 1.49
CDHR3-210ENST00000474330 ZNF384Q8TF68 577 aa24.36■■□□□ 1.49
CDHR3-210ENST00000474330 AIDAQ96BJ3 306 aa24.36■■□□□ 1.49
CDHR3-210ENST00000474330 SCN9AQ15858 1988 aa24.36■■□□□ 1.49
CDHR3-210ENST00000474330 LDHBP07195 334 aaKnown RBP24.35■■□□□ 1.49
CDHR3-210ENST00000474330 DOK7Q18PE1 504 aa24.35■■□□□ 1.49
CDHR3-210ENST00000474330 LARGE2Q8N3Y3 721 aa24.35■■□□□ 1.49
CDHR3-210ENST00000474330 RNF20Q5VTR2 975 aa24.35■■□□□ 1.49
CDHR3-210ENST00000474330 CREB3L3Q68CJ9 461 aa24.35■■□□□ 1.49
CDHR3-210ENST00000474330 JDP2Q8WYK2 163 aa24.35■■□□□ 1.49
CDHR3-210ENST00000474330 STRBPQ96SI9 672 aaKnown RBP24.35■■□□□ 1.49
CDHR3-210ENST00000474330 DBNDD1Q9H9R9 158 aa24.35■■□□□ 1.49
CDHR3-210ENST00000474330 SNX14Q9Y5W7 946 aa24.35■■□□□ 1.49
CDHR3-210ENST00000474330 GTF2IP78347 998 aa24.34■■□□□ 1.49
CDHR3-210ENST00000474330 RASEFQ8IZ41 740 aa24.34■■□□□ 1.49
CDHR3-210ENST00000474330 ZNF646O15015 1829 aaPredicted RBP24.33■■□□□ 1.49
CDHR3-210ENST00000474330 SLC27A2O14975 620 aa24.33■■□□□ 1.49
CDHR3-210ENST00000474330 FOXP2O15409 715 aa24.33■■□□□ 1.49
CDHR3-210ENST00000474330 ECE2O60344 883 aa24.33■■□□□ 1.49
CDHR3-210ENST00000474330 ADGRA1Q86SQ6 560 aa24.33■■□□□ 1.49
CDHR3-210ENST00000474330 RBM46Q8TBY0 533 aaKnown RBP24.33■■□□□ 1.49
CDHR3-210ENST00000474330 MBD4O95243 580 aa24.32■■□□□ 1.48
CDHR3-210ENST00000474330 ZKSCAN1P17029 563 aaPredicted RBP24.32■■□□□ 1.48
CDHR3-210ENST00000474330 MFSD14BQ5SR56 506 aa24.32■■□□□ 1.48
CDHR3-210ENST00000474330 DZIP1Q86YF9 867 aaKnown RBP24.32■■□□□ 1.48
CDHR3-210ENST00000474330 L3MBTL3Q96JM7 780 aaPredicted RBP24.32■■□□□ 1.48
CDHR3-210ENST00000474330 SCN4AP35499 1836 aa24.32■■□□□ 1.48
CDHR3-210ENST00000474330 TSGA10IPQ3SY00 556 aa24.32■■□□□ 1.48
CDHR3-210ENST00000474330 TTLL5Q6EMB2 1281 aa24.32■■□□□ 1.48
CDHR3-210ENST00000474330 SUGT1Q9Y2Z0 365 aa24.32■■□□□ 1.48
CDHR3-210ENST00000474330 MAGEB6P1A0A0J9YX57 407 aa24.31■■□□□ 1.48
CDHR3-210ENST00000474330 GNAT2P19087 354 aa24.31■■□□□ 1.48
CDHR3-210ENST00000474330 GRIK5Q16478 980 aa24.31■■□□□ 1.48
CDHR3-210ENST00000474330 MIGA1Q8NAN2 632 aa24.31■■□□□ 1.48
CDHR3-210ENST00000474330 IL27Q8NEV9 243 aa24.31■■□□□ 1.48
CDHR3-210ENST00000474330 SNX21Q969T3 373 aa24.31■■□□□ 1.48
CDHR3-210ENST00000474330 ARMT1Q9H993 441 aa24.31■■□□□ 1.48
CDHR3-210ENST00000474330 CTNNA3Q9UI47 895 aa24.31■■□□□ 1.48
CDHR3-210ENST00000474330 PATL2C9JE40 543 aaKnown RBP24.3■■□□□ 1.48
CDHR3-210ENST00000474330 GSTO1P78417 241 aa24.3■■□□□ 1.48
CDHR3-210ENST00000474330 BECN1Q14457 450 aa24.3■■□□□ 1.48
CDHR3-210ENST00000474330 GPC2Q8N158 579 aa24.3■■□□□ 1.48
CDHR3-210ENST00000474330 LCORLQ8N3X6 602 aa24.3■■□□□ 1.48
CDHR3-210ENST00000474330 RIOK1Q9BRS2 568 aaKnown RBP24.3■■□□□ 1.48
CDHR3-210ENST00000474330 FGAP02671 866 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms