RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 METTL22Q9BUU2 404 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-213ENST00000474240 POLIQ9UNA4 740 aa5.89□□□□□ -1.47
ECHDC1-213ENST00000474240 PIP4K2BP78356 416 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 FGD1P98174 961 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 NFKBIBQ15653 356 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 PKN1Q16512 942 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 FAM26DQ5JW98 314 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 ATCAYQ86WG3 371 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 SNX29Q8TEQ0 813 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 SLC7A3Q8WY07 619 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 PBX4Q9BYU1 374 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 ABI2Q9NYB9 513 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 CARMIL2Q6F5E8 1435 aa5.88□□□□□ -1.47
ECHDC1-213ENST00000474240 FAM95CA0A1B0GW59 222 aa5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 CYP2E1P05181 493 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 MAPK1P28482 360 aa5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 ADMP35318 185 aa5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 ECM1Q16610 540 aa5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 C8orf34Q49A92 452 aa5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 PAOXQ6QHF9 649 aa5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 ALKBH8Q96BT7 664 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 TBC1D32Q96NH3 1257 aa5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 FAM129BQ96TA1 746 aa5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 ELP3Q9H9T3 547 aa5.87□□□□□ -1.47
ECHDC1-213ENST00000474240 FAM170BA6NMN3 283 aa5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 FARP2O94887 1054 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 KIF4AO95239 1232 aa5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 ZNF865P0CJ78 1059 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 CABP4P57796 275 aa5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 PLCL1Q15111 1095 aa5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 CCDC27Q2M243 656 aa5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 TMC1Q8TDI8 760 aa5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 FBLIM1Q8WUP2 373 aa5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 POP1Q99575 1024 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 ADAM19Q9H013 955 aa5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 OSGEPQ9NPF4 335 aa5.86□□□□□ -1.47
ECHDC1-213ENST00000474240 NUTM2GQ5VZR2 741 aa5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 HGSNATQ68CP4 663 aa5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 CDPF1Q6NVV7 123 aa5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 ZNF574Q6ZN55 896 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 NCAPG2Q86XI2 1143 aa5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 C12orf50Q8NA57 414 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 WNT8BQ93098 351 aa5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 ASB16Q96NS5 453 aa5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 GZF1Q9H116 711 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 DNAJC25Q9H1X3 360 aa5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 LRRC4CQ9HCJ2 640 aa5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 CCDC87Q9NVE4 849 aa5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 ZC3H7BQ9UGR2 993 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-213ENST00000474240 PHACTR2O75167 634 aa5.84□□□□□ -1.47
ECHDC1-213ENST00000474240 TIAF1O95411 115 aa5.84□□□□□ -1.47
ECHDC1-213ENST00000474240 ZNF792Q3KQV3 632 aa5.84□□□□□ -1.47
ECHDC1-213ENST00000474240 TMCO4Q5TGY1 634 aa5.84□□□□□ -1.47
ECHDC1-213ENST00000474240 ZAR1Q86SH2 424 aa5.84□□□□□ -1.47
ECHDC1-213ENST00000474240 KSR1Q8IVT5 923 aa5.84□□□□□ -1.47
ECHDC1-213ENST00000474240 USP26Q9BXU7 913 aa5.84□□□□□ -1.47
ECHDC1-213ENST00000474240 PRKAG2Q9UGJ0 569 aa5.84□□□□□ -1.47
ECHDC1-213ENST00000474240 MEGF11A6BM72 1044 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 BIN1O00499 593 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 TNFRSF21O75509 655 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 EDN3P14138 238 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 ACPPP15309 386 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 CES1P23141 567 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 ITGAEP38570 1179 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 CEP120Q8N960 986 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 TMPRSS13Q9BYE2 586 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 BCL11AQ9H165 835 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 GGNBP2Q9H3C7 697 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 KANSL3Q9P2N6 904 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 AMOTL2Q9Y2J4 779 aa5.83□□□□□ -1.48
ECHDC1-213ENST00000474240 TREHO43280 583 aa5.82□□□□□ -1.48
ECHDC1-213ENST00000474240 DRD2P14416 443 aa5.82□□□□□ -1.48
ECHDC1-213ENST00000474240 USP11P51784 963 aa5.82□□□□□ -1.48
ECHDC1-213ENST00000474240 TMC7Q7Z402 723 aa5.82□□□□□ -1.48
ECHDC1-213ENST00000474240 WFDC3Q8IUB2 231 aa5.82□□□□□ -1.48
ECHDC1-213ENST00000474240 FAM168AQ92567 244 aa5.82□□□□□ -1.48
ECHDC1-213ENST00000474240 CYP4F12Q9HCS2 524 aa5.82□□□□□ -1.48
ECHDC1-213ENST00000474240 TMEM63CQ9P1W3 806 aa5.82□□□□□ -1.48
ECHDC1-213ENST00000474240 CPNE3O75131 537 aaKnown RBP5.81□□□□□ -1.48
ECHDC1-213ENST00000474240 ATP2B2Q01814 1243 aa5.81□□□□□ -1.48
ECHDC1-213ENST00000474240 C19orf57Q0VDD7 668 aa5.81□□□□□ -1.48
ECHDC1-213ENST00000474240 ZNF765Q7L2R6 523 aa5.81□□□□□ -1.48
ECHDC1-213ENST00000474240 SMG8Q8ND04 991 aaKnown RBP5.81□□□□□ -1.48
ECHDC1-213ENST00000474240 FBF1Q8TES7 1133 aa5.81□□□□□ -1.48
ECHDC1-213ENST00000474240 GATA6Q92908 595 aa5.81□□□□□ -1.48
ECHDC1-213ENST00000474240 SLC38A3Q99624 504 aa5.81□□□□□ -1.48
ECHDC1-213ENST00000474240 SLC5A6Q9Y289 635 aa5.81□□□□□ -1.48
ECHDC1-213ENST00000474240 NCANO14594 1321 aa5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 LOC100289279A0A1B0GTE1 492 aa5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 GPR182O15218 404 aa5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 ARL4DP49703 201 aa5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 PLCB3Q01970 1234 aa5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 C2CD4AQ8NCU7 369 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 BCL7CQ8WUZ0 217 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 HHIPQ96QV1 700 aa5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 SUGCTQ9HAC7 445 aa5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 ZFYVE28Q9HCC9 887 aa5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-213ENST00000474240 EIF4EBP3O60516 100 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms