RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-219ENST00000474036 SWI5Q1ZZU3 235 aa8.01□□□□□ -1.13
FN1-219ENST00000474036 ZNF772Q68DY9 489 aaPredicted RBP8.01□□□□□ -1.13
FN1-219ENST00000474036 IGF2-ASQ6U949 168 aa8.01□□□□□ -1.13
FN1-219ENST00000474036 PCGF6Q9BYE7 350 aa8.01□□□□□ -1.13
FN1-219ENST00000474036 TRIM33Q9UPN9 1127 aa8.01□□□□□ -1.13
FN1-219ENST00000474036 MAP3K1Q13233 1512 aa8.01□□□□□ -1.13
FN1-219ENST00000474036 TIAM1Q13009 1591 aa8.01□□□□□ -1.13
FN1-219ENST00000474036 LRRC9Q6ZRR7 1453 aa8□□□□□ -1.13
FN1-219ENST00000474036 SCAF11Q99590 1463 aaKnown RBP8□□□□□ -1.13
FN1-219ENST00000474036 KDM5AP29375 1690 aaKnown RBP8□□□□□ -1.13
FN1-219ENST00000474036 KRTAP9-6A0A140TA67 174 aa8□□□□□ -1.13
FN1-219ENST00000474036 ZBTB39O15060 712 aa8□□□□□ -1.13
FN1-219ENST00000474036 PSAPP07602 524 aa8□□□□□ -1.13
FN1-219ENST00000474036 C16orf46Q6P387 395 aa8□□□□□ -1.13
FN1-219ENST00000474036 IL22RA1Q8N6P7 574 aa8□□□□□ -1.13
FN1-219ENST00000474036 MIA2Q96PC5 1412 aa8□□□□□ -1.13
FN1-219ENST00000474036 ARHGAP35Q9NRY4 1499 aa8□□□□□ -1.13
FN1-219ENST00000474036 TMEM94Q12767 1356 aa7.99□□□□□ -1.13
FN1-219ENST00000474036 CARNS1A5YM72 827 aa7.99□□□□□ -1.13
FN1-219ENST00000474036 RGS12O14924 1447 aa7.99□□□□□ -1.13
FN1-219ENST00000474036 KIF3BO15066 747 aa7.99□□□□□ -1.13
FN1-219ENST00000474036 HOXD8P13378 290 aaPredicted RBP7.99□□□□□ -1.13
FN1-219ENST00000474036 SETDB1Q15047 1291 aa7.99□□□□□ -1.13
FN1-219ENST00000474036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.99□□□□□ -1.13
FN1-219ENST00000474036 CXXC1Q9P0U4 656 aaPredicted RBP7.99□□□□□ -1.13
FN1-219ENST00000474036 WASHC2CQ9Y4E1 1318 aa7.99□□□□□ -1.13
FN1-219ENST00000474036 MYO5BQ9ULV0 1848 aa7.99□□□□□ -1.13
FN1-219ENST00000474036 TMEM88BA6NKF7 163 aa7.98□□□□□ -1.13
FN1-219ENST00000474036 HYAL3O43820 417 aaPredicted RBP7.98□□□□□ -1.13
FN1-219ENST00000474036 ATP11AP98196 1134 aa7.98□□□□□ -1.13
FN1-219ENST00000474036 NLRP13Q86W25 1043 aa7.98□□□□□ -1.13
FN1-219ENST00000474036 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
FN1-219ENST00000474036 PIK3C2BO00750 1634 aa7.98□□□□□ -1.13
FN1-219ENST00000474036 CCDC18Q5T9S5 1454 aa7.98□□□□□ -1.13
FN1-219ENST00000474036 BRD2P25440 801 aaKnown RBP7.97□□□□□ -1.13
FN1-219ENST00000474036 SOX18P35713 384 aa7.97□□□□□ -1.13
FN1-219ENST00000474036 AGGF1Q8N302 714 aaeCLIP7.97□□□□□ -1.13
FN1-219ENST00000474036 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.97□□□□□ -1.13
FN1-219ENST00000474036 PLEKHH2Q8IVE3 1493 aa7.96□□□□□ -1.13
FN1-219ENST00000474036 CDK12Q9NYV4 1490 aaPredicted RBP7.96□□□□□ -1.13
FN1-219ENST00000474036 F8W735 103 aaPredicted RBP7.96□□□□□ -1.14
FN1-219ENST00000474036 TM4SF5O14894 197 aa7.96□□□□□ -1.14
FN1-219ENST00000474036 ARID4AP29374 1257 aaPredicted RBP7.96□□□□□ -1.14
FN1-219ENST00000474036 LRP8Q14114 963 aa7.96□□□□□ -1.14
FN1-219ENST00000474036 DZIP1LQ8IYY4 767 aaKnown RBP7.96□□□□□ -1.14
FN1-219ENST00000474036 GALNT11Q8NCW6 608 aa7.96□□□□□ -1.14
FN1-219ENST00000474036 AKTIPQ9H8T0 292 aa7.96□□□□□ -1.14
FN1-219ENST00000474036 GPATCH8Q9UKJ3 1502 aaKnown RBP7.96□□□□□ -1.14
FN1-219ENST00000474036 AFF2P51816 1311 aa7.96□□□□□ -1.14
FN1-219ENST00000474036 MSH6P52701 1360 aa7.96□□□□□ -1.14
FN1-219ENST00000474036 ERVK-7P63135 1459 aa7.95□□□□□ -1.14
FN1-219ENST00000474036 CHD2O14647 1828 aaKnown RBP7.95□□□□□ -1.14
FN1-219ENST00000474036 GHRHP01286 108 aa7.95□□□□□ -1.14
FN1-219ENST00000474036 CYP2E1P05181 493 aaPredicted RBP7.95□□□□□ -1.14
FN1-219ENST00000474036 PRR23CQ6ZRP0 262 aa7.95□□□□□ -1.14
FN1-219ENST00000474036 OR13H1Q8NG92 308 aa7.95□□□□□ -1.14
FN1-219ENST00000474036 COL26A1Q96A83 441 aa7.95□□□□□ -1.14
FN1-219ENST00000474036 CFDP1Q9UEE9 299 aaPredicted RBP7.95□□□□□ -1.14
FN1-219ENST00000474036 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.95□□□□□ -1.14
FN1-219ENST00000474036 LRP5O75197 1615 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 WISP1O95388 367 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 LTKP29376 864 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 ZAP70P43403 619 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 TXNDC11Q6PKC3 985 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 TXNDC2Q86VQ3 553 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 GPR152Q8TDT2 470 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 KCNK4Q9NYG8 393 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 SPATA31A6Q5VVP1 1343 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 CCNB3Q8WWL7 1395 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 NCOA2Q15596 1464 aa7.94□□□□□ -1.14
FN1-219ENST00000474036 ABCC3O15438 1527 aa7.93□□□□□ -1.14
FN1-219ENST00000474036 PRDM15P57071 1507 aaPredicted RBP7.93□□□□□ -1.14
FN1-219ENST00000474036 NWD1Q149M9 1564 aa7.93□□□□□ -1.14
FN1-219ENST00000474036 SCNN1AP37088 669 aa7.93□□□□□ -1.14
FN1-219ENST00000474036 TMEM130Q8N3G9 435 aa7.93□□□□□ -1.14
FN1-219ENST00000474036 LACRTQ9GZZ8 138 aa7.93□□□□□ -1.14
FN1-219ENST00000474036 SEPT3Q9UH03 358 aa7.93□□□□□ -1.14
FN1-219ENST00000474036 DHX29Q7Z478 1369 aaKnown RBP7.93□□□□□ -1.14
FN1-219ENST00000474036 AHDC1Q5TGY3 1603 aaPredicted RBP7.92□□□□□ -1.14
FN1-219ENST00000474036 EP400Q96L91 3159 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 LINC01387J3KSC0 135 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 ATP2B4P23634 1241 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 CDC25BP30305 580 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 Q6ZS46 218 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 PIK3R5Q8WYR1 880 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 C8orf37Q96NL8 207 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 SLC26A8Q96RN1 970 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 MRPL18Q9H0U6 180 aaKnown RBP7.92□□□□□ -1.14
FN1-219ENST00000474036 RASSF4Q9H2L5 321 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 ZNF644Q9H582 1327 aaPredicted RBP7.92□□□□□ -1.14
FN1-219ENST00000474036 KIAA1107Q9UPP5 1409 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 SLIT1O75093 1534 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 BRWD3Q6RI45 1802 aa7.92□□□□□ -1.14
FN1-219ENST00000474036 ATCAYQ86WG3 371 aa7.91□□□□□ -1.14
FN1-219ENST00000474036 UBL7Q96S82 380 aaPredicted RBP7.91□□□□□ -1.14
FN1-219ENST00000474036 STIM2Q9P246 746 aa7.91□□□□□ -1.14
FN1-219ENST00000474036 PPME1Q9Y570 386 aa7.91□□□□□ -1.14
FN1-219ENST00000474036 EID1Q9Y6B2 187 aa7.91□□□□□ -1.14
FN1-219ENST00000474036 FGD6Q6ZV73 1430 aa7.91□□□□□ -1.14
FN1-219ENST00000474036 NKTRP30414 1462 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms