RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 FKBP1AP62942 108 aaKnown RBP16.14■□□□□ 0.17
SHROOM3-204ENST00000473602 MTX1Q13505 466 aa16.14■□□□□ 0.17
SHROOM3-204ENST00000473602 CENPFP49454 3210 aa16.14■□□□□ 0.17
SHROOM3-204ENST00000473602 MYH13Q9UKX3 1938 aa16.13■□□□□ 0.17
SHROOM3-204ENST00000473602 ECM29Q5VYK3 1845 aa16.13■□□□□ 0.17
SHROOM3-204ENST00000473602 HIBADHP31937 336 aaKnown RBP16.13■□□□□ 0.17
SHROOM3-204ENST00000473602 PUM3Q15397 648 aaKnown RBP16.13■□□□□ 0.17
SHROOM3-204ENST00000473602 HABP4Q5JVS0 413 aaKnown RBP16.13■□□□□ 0.17
SHROOM3-204ENST00000473602 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
SHROOM3-204ENST00000473602 TMEM57Q8N5G2 664 aa16.13■□□□□ 0.17
SHROOM3-204ENST00000473602 CLMNQ96JQ2 1002 aa16.13■□□□□ 0.17
SHROOM3-204ENST00000473602 TNNQ9UQP3 1299 aa16.13■□□□□ 0.17
SHROOM3-204ENST00000473602 IGF2BP3O00425 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 GNAI2P04899 355 aa16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 DLGAP5Q15398 846 aa16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 MAP3K11Q16584 847 aa16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 CAVIN4Q5BKX8 364 aa16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 DZIP1LQ8IYY4 767 aaKnown RBP16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 TDRD7Q8NHU6 1098 aaKnown RBP16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 WNK4Q96J92 1243 aa16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 FAM84BQ96KN1 310 aaPredicted RBP16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 COPRSQ9NQ92 184 aa16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 FAM205AQ6ZU69 1335 aa16.12■□□□□ 0.17
SHROOM3-204ENST00000473602 PPP1R12BO60237 982 aaPredicted RBP16.11■□□□□ 0.17
SHROOM3-204ENST00000473602 IFIT1P09914 478 aaKnown RBP16.11■□□□□ 0.17
SHROOM3-204ENST00000473602 ZBTB48P10074 688 aaPredicted RBP16.11■□□□□ 0.17
SHROOM3-204ENST00000473602 IL15P40933 162 aaPredicted RBP16.11■□□□□ 0.17
SHROOM3-204ENST00000473602 GYG1P46976 350 aa16.11■□□□□ 0.17
SHROOM3-204ENST00000473602 ATG9AQ7Z3C6 839 aa16.11■□□□□ 0.17
SHROOM3-204ENST00000473602 VPS37DQ86XT2 251 aa16.11■□□□□ 0.17
SHROOM3-204ENST00000473602 PCDHAC2Q9Y5I4 1007 aa16.11■□□□□ 0.17
SHROOM3-204ENST00000473602 SRGAP3O43295 1099 aa16.1■□□□□ 0.17
SHROOM3-204ENST00000473602 FGFR2P21802 821 aa16.1■□□□□ 0.17
SHROOM3-204ENST00000473602 FBXO33Q7Z6M2 555 aa16.1■□□□□ 0.17
SHROOM3-204ENST00000473602 CERS5Q8N5B7 392 aa16.1■□□□□ 0.17
SHROOM3-204ENST00000473602 LPIN2Q92539 896 aa16.1■□□□□ 0.17
SHROOM3-204ENST00000473602 PTPN22Q9Y2R2 807 aa16.1■□□□□ 0.17
SHROOM3-204ENST00000473602 BRCA2P51587 3418 aa16.09■□□□□ 0.17
SHROOM3-204ENST00000473602 CLRN2A0PK11 232 aa16.09■□□□□ 0.17
SHROOM3-204ENST00000473602 MS4A1P11836 297 aa16.09■□□□□ 0.17
SHROOM3-204ENST00000473602 SLC5A1P13866 664 aa16.09■□□□□ 0.17
SHROOM3-204ENST00000473602 SUPT20HL1Q3ZLR7 823 aa16.09■□□□□ 0.17
SHROOM3-204ENST00000473602 MTMR14Q8NCE2 650 aa16.09■□□□□ 0.17
SHROOM3-204ENST00000473602 CD99L2Q8TCZ2 262 aa16.09■□□□□ 0.17
SHROOM3-204ENST00000473602 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
SHROOM3-204ENST00000473602 SIL1Q9H173 461 aa16.09■□□□□ 0.17
SHROOM3-204ENST00000473602 CEP126Q9P2H0 1117 aa16.09■□□□□ 0.17
SHROOM3-204ENST00000473602 F8W031 263 aaPredicted RBP16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 EN2P19622 333 aaPredicted RBP16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 GJA5P36382 358 aa16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 CRHR2Q13324 411 aa16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 CFAP100Q494V2 611 aa16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 NBPF12Q5TAG4 269 aaPredicted RBP16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 OTUD7BQ6GQQ9 843 aa16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 PRMT6Q96LA8 375 aaPredicted RBP16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 EFCC1Q9HA90 598 aa16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 PPP2R3BQ9Y5P8 575 aa16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 KIAA0100Q14667 2235 aaKnown RBP16.08■□□□□ 0.16
SHROOM3-204ENST00000473602 UNCXA6NJT0 531 aa16.07■□□□□ 0.16
SHROOM3-204ENST00000473602 MYO1BO43795 1136 aa16.07■□□□□ 0.16
SHROOM3-204ENST00000473602 MFSD14BQ5SR56 506 aa16.07■□□□□ 0.16
SHROOM3-204ENST00000473602 ITPRIPQ8IWB1 547 aa16.07■□□□□ 0.16
SHROOM3-204ENST00000473602 TBC1D22AQ8WUA7 517 aa16.07■□□□□ 0.16
SHROOM3-204ENST00000473602 ARMC5Q96C12 935 aa16.07■□□□□ 0.16
SHROOM3-204ENST00000473602 PTPN18Q99952 460 aa16.07■□□□□ 0.16
SHROOM3-204ENST00000473602 VEZTQ9HBM0 779 aa16.07■□□□□ 0.16
SHROOM3-204ENST00000473602 PA2G4Q9UQ80 394 aaKnown RBP16.07■□□□□ 0.16
SHROOM3-204ENST00000473602 COL1A1P02452 1464 aaPredicted RBP16.06■□□□□ 0.16
SHROOM3-204ENST00000473602 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
SHROOM3-204ENST00000473602 FRAT2O75474 233 aaPredicted RBP16.06■□□□□ 0.16
SHROOM3-204ENST00000473602 USP2O75604 605 aaPredicted RBP16.06■□□□□ 0.16
SHROOM3-204ENST00000473602 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
SHROOM3-204ENST00000473602 RLBP1P12271 317 aa16.06■□□□□ 0.16
SHROOM3-204ENST00000473602 CAP1Q01518 475 aa16.06■□□□□ 0.16
SHROOM3-204ENST00000473602 SP3Q02447 781 aa16.06■□□□□ 0.16
SHROOM3-204ENST00000473602 ATP2B3Q16720 1220 aa16.06■□□□□ 0.16
SHROOM3-204ENST00000473602 RCAN3Q9UKA8 241 aa16.06■□□□□ 0.16
SHROOM3-204ENST00000473602 SSC5DA1L4H1 1573 aa16.05■□□□□ 0.16
SHROOM3-204ENST00000473602 AOX1Q06278 1338 aa16.05■□□□□ 0.16
SHROOM3-204ENST00000473602 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
SHROOM3-204ENST00000473602 ZBTB22O15209 634 aa16.05■□□□□ 0.16
SHROOM3-204ENST00000473602 IREB2P48200 963 aaKnown RBP16.05■□□□□ 0.16
SHROOM3-204ENST00000473602 BCAMP50895 628 aa16.05■□□□□ 0.16
SHROOM3-204ENST00000473602 RASA3Q14644 834 aa16.05■□□□□ 0.16
SHROOM3-204ENST00000473602 JAG2Q9Y219 1238 aa16.05■□□□□ 0.16
SHROOM3-204ENST00000473602 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
SHROOM3-204ENST00000473602 TESPA1A2RU30 521 aaPredicted RBP16.04■□□□□ 0.16
SHROOM3-204ENST00000473602 RBM5P52756 815 aaKnown RBP eCLIP16.04■□□□□ 0.16
SHROOM3-204ENST00000473602 ANKRD13AQ8IZ07 590 aa16.04■□□□□ 0.16
SHROOM3-204ENST00000473602 GNL3LQ9NVN8 582 aaKnown RBP16.04■□□□□ 0.16
SHROOM3-204ENST00000473602 SERPINA10Q9UK55 444 aa16.04■□□□□ 0.16
SHROOM3-204ENST00000473602 AKAP2Q9Y2D5 859 aa16.04■□□□□ 0.16
SHROOM3-204ENST00000473602 SUGT1Q9Y2Z0 365 aa16.04■□□□□ 0.16
SHROOM3-204ENST00000473602 SSH3Q8TE77 659 aa16.03■□□□□ 0.16
SHROOM3-204ENST00000473602 ELP3Q9H9T3 547 aa16.03■□□□□ 0.16
SHROOM3-204ENST00000473602 TTF2Q9UNY4 1162 aaKnown RBP16.03■□□□□ 0.16
SHROOM3-204ENST00000473602 IQSEC3Q9UPP2 1182 aaPredicted RBP16.03■□□□□ 0.16
SHROOM3-204ENST00000473602 MAST3O60307 1309 aa16.02■□□□□ 0.16
SHROOM3-204ENST00000473602 SEMA3EO15041 775 aa16.02■□□□□ 0.16
SHROOM3-204ENST00000473602 FXR1P51114 621 aaKnown RBP eCLIP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms