RNA–Protein interactions for RNA: ENST00000473101.1

RGPD6-208, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-208ENST00000473101 MEI1Q5TIA1 1274 aa5.42□□□□□ -1.54
RGPD6-208ENST00000473101 NBPF11Q86T75 865 aa5.42□□□□□ -1.54
RGPD6-208ENST00000473101 C1orf127Q8N9H9 656 aa5.42□□□□□ -1.54
RGPD6-208ENST00000473101 ARMC5Q96C12 935 aa5.42□□□□□ -1.54
RGPD6-208ENST00000473101 GMLQ99445 158 aa5.42□□□□□ -1.54
RGPD6-208ENST00000473101 LACRTQ9GZZ8 138 aa5.42□□□□□ -1.54
RGPD6-208ENST00000473101 CHRDQ9H2X0 955 aa5.42□□□□□ -1.54
RGPD6-208ENST00000473101 AKTIPQ9H8T0 292 aa5.42□□□□□ -1.54
RGPD6-208ENST00000473101 SRA1Q9HD15 236 aaKnown RBP5.42□□□□□ -1.54
RGPD6-208ENST00000473101 CNTN3Q9P232 1028 aa5.42□□□□□ -1.54
RGPD6-208ENST00000473101 SMARCA5O60264 1052 aaPredicted RBP5.41□□□□□ -1.54
RGPD6-208ENST00000473101 HOXD8P13378 290 aaPredicted RBP5.41□□□□□ -1.54
RGPD6-208ENST00000473101 EDN3P14138 238 aa5.41□□□□□ -1.54
RGPD6-208ENST00000473101 CDC25BP30305 580 aa5.41□□□□□ -1.54
RGPD6-208ENST00000473101 GSTT1P30711 240 aa5.41□□□□□ -1.54
RGPD6-208ENST00000473101 GTF2F1P35269 517 aaKnown RBP eCLIP5.41□□□□□ -1.54
RGPD6-208ENST00000473101 ATP11AP98196 1134 aa5.41□□□□□ -1.54
RGPD6-208ENST00000473101 COL13A1Q5TAT6 717 aaPredicted RBP5.41□□□□□ -1.54
RGPD6-208ENST00000473101 TXNDC11Q6PKC3 985 aa5.41□□□□□ -1.54
RGPD6-208ENST00000473101 DPH6Q7L8W6 267 aa5.41□□□□□ -1.54
RGPD6-208ENST00000473101 KRTAP19-1Q8IUB9 90 aa5.41□□□□□ -1.54
RGPD6-208ENST00000473101 OR13H1Q8NG92 308 aa5.41□□□□□ -1.54
RGPD6-208ENST00000473101 DHX38Q92620 1227 aaKnown RBP5.41□□□□□ -1.54
RGPD6-208ENST00000473101 SPACA7Q96KW9 195 aa5.41□□□□□ -1.54
RGPD6-208ENST00000473101 PUS7Q96PZ0 661 aaKnown RBP5.41□□□□□ -1.54
RGPD6-208ENST00000473101 MRPL18Q9H0U6 180 aaKnown RBP5.41□□□□□ -1.54
RGPD6-208ENST00000473101 TRAK1Q9UPV9 953 aa5.41□□□□□ -1.54
RGPD6-208ENST00000473101 GLB1P16278 677 aa5.4□□□□□ -1.54
RGPD6-208ENST00000473101 HYAL2Q12891 473 aa5.4□□□□□ -1.54
RGPD6-208ENST00000473101 LRP8Q14114 963 aa5.4□□□□□ -1.54
RGPD6-208ENST00000473101 GRM2Q14416 872 aa5.4□□□□□ -1.54
RGPD6-208ENST00000473101 SETDB1Q15047 1291 aa5.4□□□□□ -1.54
RGPD6-208ENST00000473101 CEP135Q66GS9 1140 aa5.4□□□□□ -1.54
RGPD6-208ENST00000473101 AGGF1Q8N302 714 aaeCLIP5.4□□□□□ -1.54
RGPD6-208ENST00000473101 SPATA32Q96LK8 384 aa5.4□□□□□ -1.54
RGPD6-208ENST00000473101 DNAJC2Q99543 621 aaKnown RBP5.4□□□□□ -1.54
RGPD6-208ENST00000473101 EHD4Q9H223 541 aa5.4□□□□□ -1.54
RGPD6-208ENST00000473101 PPME1Q9Y570 386 aa5.4□□□□□ -1.54
RGPD6-208ENST00000473101 F8W735 103 aaPredicted RBP5.39□□□□□ -1.55
RGPD6-208ENST00000473101 LINC01387J3KSC0 135 aa5.39□□□□□ -1.55
RGPD6-208ENST00000473101 HYAL3O43820 417 aaPredicted RBP5.39□□□□□ -1.55
RGPD6-208ENST00000473101 SMNDC1O75940 238 aaKnown RBP eCLIP5.39□□□□□ -1.55
RGPD6-208ENST00000473101 HSP90B1P14625 803 aaKnown RBP5.39□□□□□ -1.55
RGPD6-208ENST00000473101 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
RGPD6-208ENST00000473101 KIAA0319Q5VV43 1072 aa5.39□□□□□ -1.55
RGPD6-208ENST00000473101 PRR23CQ6ZRP0 262 aa5.39□□□□□ -1.55
RGPD6-208ENST00000473101 NOC4LQ9BVI4 516 aaKnown RBP5.39□□□□□ -1.55
RGPD6-208ENST00000473101 TTF2Q9UNY4 1162 aaKnown RBP5.39□□□□□ -1.55
RGPD6-208ENST00000473101 A0A1W2PP55 124 aa5.38□□□□□ -1.55
RGPD6-208ENST00000473101 CYP2E1P05181 493 aaPredicted RBP5.38□□□□□ -1.55
RGPD6-208ENST00000473101 PWP1Q13610 501 aa5.38□□□□□ -1.55
RGPD6-208ENST00000473101 SOGA3Q5TF21 947 aa5.38□□□□□ -1.55
RGPD6-208ENST00000473101 ERMP1Q7Z2K6 904 aa5.38□□□□□ -1.55
RGPD6-208ENST00000473101 MAP4K3Q8IVH8 894 aa5.38□□□□□ -1.55
RGPD6-208ENST00000473101 GALNT11Q8NCW6 608 aa5.38□□□□□ -1.55
RGPD6-208ENST00000473101 HIRIP3Q9BW71 556 aaPredicted RBP5.38□□□□□ -1.55
RGPD6-208ENST00000473101 CARD10Q9BWT7 1032 aa5.38□□□□□ -1.55
RGPD6-208ENST00000473101 RASSF4Q9H2L5 321 aa5.38□□□□□ -1.55
RGPD6-208ENST00000473101 XRCC5P13010 732 aaKnown RBP5.37□□□□□ -1.55
RGPD6-208ENST00000473101 CDC27P30260 824 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 GJA8P48165 433 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 PAK2Q13177 524 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 CCDC85BQ15834 202 aaPredicted RBP5.37□□□□□ -1.55
RGPD6-208ENST00000473101 NOP9Q86U38 636 aaKnown RBP5.37□□□□□ -1.55
RGPD6-208ENST00000473101 NCAPG2Q86XI2 1143 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 RELL1Q8IUW5 271 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 DZIP1LQ8IYY4 767 aaKnown RBP5.37□□□□□ -1.55
RGPD6-208ENST00000473101 TMEM130Q8N3G9 435 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 GLIS3Q8NEA6 775 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.37□□□□□ -1.55
RGPD6-208ENST00000473101 RSRP1Q9BUV0 290 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 LNPKQ9C0E8 428 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 MUC3BQ9H195 1237 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 GOLGA2P5Q9HBQ8 144 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 COPRSQ9NQ92 184 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 KANSL3Q9P2N6 904 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 PPM1HQ9ULR3 514 aa5.37□□□□□ -1.55
RGPD6-208ENST00000473101 STK10O94804 968 aaKnown RBP5.36□□□□□ -1.55
RGPD6-208ENST00000473101 WISP1O95388 367 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 RLBP1P12271 317 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 FSTP19883 344 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 FCGRTP55899 365 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 RBL2Q08999 1139 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 PEAR1Q5VY43 1037 aaPredicted RBP5.36□□□□□ -1.55
RGPD6-208ENST00000473101 PRPF40BQ6NWY9 871 aaKnown RBP5.36□□□□□ -1.55
RGPD6-208ENST00000473101 ADAMTSL4Q6UY14 1074 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 ACAD11Q709F0 780 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 CACTIN-AS1Q8N1I8 211 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 C3orf58Q8NDZ4 430 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 GPRASP2Q96D09 838 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 SPON2Q9BUD6 331 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 LIN7BQ9HAP6 207 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 ZFYVE1Q9HBF4 777 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 SH2B1Q9NRF2 756 aaPredicted RBP5.36□□□□□ -1.55
RGPD6-208ENST00000473101 LATS2Q9NRM7 1088 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 KBTBD4Q9NVX7 518 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 KCNK4Q9NYG8 393 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 SALL4Q9UJQ4 1053 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 AKAP2Q9Y2D5 859 aa5.36□□□□□ -1.55
RGPD6-208ENST00000473101 CADPSQ9ULU8 1353 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms