RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 MCOLN1Q9GZU1 580 aa16.19■□□□□ 0.18
TPM3-216ENST00000473036 CHMP4BQ9H444 224 aaKnown RBP16.19■□□□□ 0.18
TPM3-216ENST00000473036 SAGE1Q9NXZ1 904 aa16.19■□□□□ 0.18
TPM3-216ENST00000473036 AKAP2Q9Y2D5 859 aa16.19■□□□□ 0.18
TPM3-216ENST00000473036 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
TPM3-216ENST00000473036 ZBTB22O15209 634 aa16.18■□□□□ 0.18
TPM3-216ENST00000473036 RASGRF1Q13972 1273 aa16.18■□□□□ 0.18
TPM3-216ENST00000473036 KIF4BQ2VIQ3 1234 aa16.18■□□□□ 0.18
TPM3-216ENST00000473036 NBPF9Q3BBW0 867 aa16.18■□□□□ 0.18
TPM3-216ENST00000473036 MFSD14BQ5SR56 506 aa16.18■□□□□ 0.18
TPM3-216ENST00000473036 RHPN1Q8TCX5 695 aa16.18■□□□□ 0.18
TPM3-216ENST00000473036 CCDC8Q9H0W5 538 aaPredicted RBP16.18■□□□□ 0.18
TPM3-216ENST00000473036 DBNLQ9UJU6 430 aaKnown RBP16.18■□□□□ 0.18
TPM3-216ENST00000473036 APBB1O00213 710 aa16.17■□□□□ 0.18
TPM3-216ENST00000473036 IRX6P78412 446 aaPredicted RBP16.17■□□□□ 0.18
TPM3-216ENST00000473036 PI16Q6UXB8 463 aa16.17■□□□□ 0.18
TPM3-216ENST00000473036 CCDC102AQ96A19 550 aa16.17■□□□□ 0.18
TPM3-216ENST00000473036 IL1RAPL2Q9NP60 686 aa16.17■□□□□ 0.18
TPM3-216ENST00000473036 SCAF8Q9UPN6 1271 aaKnown RBP16.17■□□□□ 0.18
TPM3-216ENST00000473036 MYO5AQ9Y4I1 1855 aaKnown RBP16.16■□□□□ 0.18
TPM3-216ENST00000473036 WNT10BO00744 389 aa16.16■□□□□ 0.18
TPM3-216ENST00000473036 HMMRO75330 724 aa16.16■□□□□ 0.18
TPM3-216ENST00000473036 REM2Q8IYK8 340 aaPredicted RBP16.16■□□□□ 0.18
TPM3-216ENST00000473036 ARID4AP29374 1257 aaPredicted RBP16.15■□□□□ 0.18
TPM3-216ENST00000473036 MCAMP43121 646 aa16.15■□□□□ 0.18
TPM3-216ENST00000473036 DGKZQ13574 1117 aa16.15■□□□□ 0.18
TPM3-216ENST00000473036 DCTPP1Q9H773 170 aa16.15■□□□□ 0.18
TPM3-216ENST00000473036 HMG20BQ9P0W2 317 aa16.15■□□□□ 0.18
TPM3-216ENST00000473036 TSKSQ9UJT2 592 aa16.15■□□□□ 0.18
TPM3-216ENST00000473036 ECM29Q5VYK3 1845 aa16.15■□□□□ 0.18
TPM3-216ENST00000473036 TNRC18O15417 2968 aaPredicted RBP16.14■□□□□ 0.17
TPM3-216ENST00000473036 SMARCA5O60264 1052 aaPredicted RBP16.14■□□□□ 0.17
TPM3-216ENST00000473036 FRAT2O75474 233 aaPredicted RBP16.14■□□□□ 0.17
TPM3-216ENST00000473036 HUNKP57058 714 aa16.14■□□□□ 0.17
TPM3-216ENST00000473036 MTMR14Q8NCE2 650 aa16.14■□□□□ 0.17
TPM3-216ENST00000473036 ZNF384Q8TF68 577 aa16.14■□□□□ 0.17
TPM3-216ENST00000473036 PRMT6Q96LA8 375 aaPredicted RBP16.14■□□□□ 0.17
TPM3-216ENST00000473036 ZNF408Q9H9D4 720 aa16.14■□□□□ 0.17
TPM3-216ENST00000473036 TTF2Q9UNY4 1162 aaKnown RBP16.14■□□□□ 0.17
TPM3-216ENST00000473036 ADM5C9JUS6 153 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 PRDX5P30044 214 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 CFAP100Q494V2 611 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 ANGEL2Q5VTE6 544 aaKnown RBP16.13■□□□□ 0.17
TPM3-216ENST00000473036 RGMBQ6NW40 437 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 AACSQ86V21 672 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 ERC1Q8IUD2 1116 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 C2orf69Q8N8R5 385 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 GGA3Q9NZ52 723 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 DENND2AQ9ULE3 1009 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 SALL1Q9NSC2 1324 aa16.13■□□□□ 0.17
TPM3-216ENST00000473036 SEMA3EO15041 775 aa16.12■□□□□ 0.17
TPM3-216ENST00000473036 RAB11FIP3O75154 756 aa16.12■□□□□ 0.17
TPM3-216ENST00000473036 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
TPM3-216ENST00000473036 USP48Q86UV5 1035 aa16.12■□□□□ 0.17
TPM3-216ENST00000473036 OGFOD1Q8N543 542 aa16.12■□□□□ 0.17
TPM3-216ENST00000473036 WDR66Q8TBY9 1149 aa16.12■□□□□ 0.17
TPM3-216ENST00000473036 TBC1D22AQ8WUA7 517 aa16.12■□□□□ 0.17
TPM3-216ENST00000473036 GNL3LQ9NVN8 582 aaKnown RBP16.12■□□□□ 0.17
TPM3-216ENST00000473036 NDUFB9Q9Y6M9 179 aa16.12■□□□□ 0.17
TPM3-216ENST00000473036 PDS5AQ29RF7 1337 aaKnown RBP16.12■□□□□ 0.17
TPM3-216ENST00000473036 SPDYE2BA6NHP3 402 aa16.11■□□□□ 0.17
TPM3-216ENST00000473036 FAM155AB1AL88 458 aaPredicted RBP16.11■□□□□ 0.17
TPM3-216ENST00000473036 SPDYE6P0CI01 402 aa16.11■□□□□ 0.17
TPM3-216ENST00000473036 CRKP46108 304 aa16.11■□□□□ 0.17
TPM3-216ENST00000473036 HSP90AB4PQ58FF6 505 aa16.11■□□□□ 0.17
TPM3-216ENST00000473036 KRT26Q7Z3Y9 468 aa16.11■□□□□ 0.17
TPM3-216ENST00000473036 SPATA5Q8NB90 893 aa16.11■□□□□ 0.17
TPM3-216ENST00000473036 DCPSQ96C86 337 aaKnown RBP16.11■□□□□ 0.17
TPM3-216ENST00000473036 GBA2Q9HCG7 927 aaPredicted RBP16.11■□□□□ 0.17
TPM3-216ENST00000473036 SNRKQ9NRH2 765 aa16.11■□□□□ 0.17
TPM3-216ENST00000473036 PDE4DIPQ5VU43 2346 aa16.11■□□□□ 0.17
TPM3-216ENST00000473036 MYH2Q9UKX2 1941 aa16.1■□□□□ 0.17
TPM3-216ENST00000473036 CASP8AP2Q9UKL3 1982 aa16.1■□□□□ 0.17
TPM3-216ENST00000473036 MMP14P50281 582 aa16.1■□□□□ 0.17
TPM3-216ENST00000473036 DIXDC1Q155Q3 683 aa16.1■□□□□ 0.17
TPM3-216ENST00000473036 GORABQ5T7V8 394 aa16.1■□□□□ 0.17
TPM3-216ENST00000473036 ZNF512BQ96KM6 892 aaPredicted RBP16.1■□□□□ 0.17
TPM3-216ENST00000473036 SERPINA10Q9UK55 444 aa16.1■□□□□ 0.17
TPM3-216ENST00000473036 HDAC9Q9UKV0 1011 aa16.1■□□□□ 0.17
TPM3-216ENST00000473036 IGHDP01880 384 aa16.09■□□□□ 0.17
TPM3-216ENST00000473036 CYP2E1P05181 493 aaPredicted RBP16.09■□□□□ 0.17
TPM3-216ENST00000473036 HDAC1Q13547 482 aaPredicted RBP16.09■□□□□ 0.17
TPM3-216ENST00000473036 DLGAP5Q15398 846 aa16.09■□□□□ 0.17
TPM3-216ENST00000473036 TTC39AQ5SRH9 613 aa16.09■□□□□ 0.17
TPM3-216ENST00000473036 PRAMEF18Q5VWM3 479 aa16.09■□□□□ 0.17
TPM3-216ENST00000473036 APOBEC3HQ6NTF7 200 aaKnown RBP16.09■□□□□ 0.17
TPM3-216ENST00000473036 BCL11AQ9H165 835 aa16.09■□□□□ 0.17
TPM3-216ENST00000473036 SUGT1Q9Y2Z0 365 aa16.09■□□□□ 0.17
TPM3-216ENST00000473036 CLRN2A0PK11 232 aa16.08■□□□□ 0.16
TPM3-216ENST00000473036 NEFLP07196 543 aa16.08■□□□□ 0.16
TPM3-216ENST00000473036 UQCRFS1P1P0C7P4 283 aa16.08■□□□□ 0.16
TPM3-216ENST00000473036 ZAP70P43403 619 aa16.08■□□□□ 0.16
TPM3-216ENST00000473036 FKBP1BP68106 108 aa16.08■□□□□ 0.16
TPM3-216ENST00000473036 CLASRPQ8N2M8 674 aaKnown RBP16.08■□□□□ 0.16
TPM3-216ENST00000473036 MRIQ9BWK5 157 aa16.08■□□□□ 0.16
TPM3-216ENST00000473036 LRRCC1Q9C099 1032 aa16.08■□□□□ 0.16
TPM3-216ENST00000473036 PITPNM2Q9BZ72 1349 aa16.08■□□□□ 0.16
TPM3-216ENST00000473036 ZNF157P51786 506 aaPredicted RBP16.07■□□□□ 0.16
TPM3-216ENST00000473036 HDLBPQ00341 1268 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms