RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 LRRC24Q50LG9 513 aa11.31□□□□□ -0.6
SMC4-214ENST00000472991 CEP85Q6P2H3 762 aa11.31□□□□□ -0.6
SMC4-214ENST00000472991 PADI6Q6TGC4 694 aa11.31□□□□□ -0.6
SMC4-214ENST00000472991 HELBQ8NG08 1087 aaPredicted RBP11.31□□□□□ -0.6
SMC4-214ENST00000472991 GPR101Q96P66 508 aaPredicted RBP11.31□□□□□ -0.6
SMC4-214ENST00000472991 SIL1Q9H173 461 aa11.31□□□□□ -0.6
SMC4-214ENST00000472991 RNF181Q9P0P0 153 aa11.31□□□□□ -0.6
SMC4-214ENST00000472991 RGS20O76081 388 aa11.3□□□□□ -0.6
SMC4-214ENST00000472991 IARSP41252 1262 aaKnown RBP11.3□□□□□ -0.6
SMC4-214ENST00000472991 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
SMC4-214ENST00000472991 C9orf131Q5VYM1 1079 aa11.3□□□□□ -0.6
SMC4-214ENST00000472991 SUPT20HQ8NEM7 779 aa11.3□□□□□ -0.6
SMC4-214ENST00000472991 TBC1D16Q8TBP0 767 aa11.3□□□□□ -0.6
SMC4-214ENST00000472991 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
SMC4-214ENST00000472991 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
SMC4-214ENST00000472991 POLLQ9UGP5 575 aa11.3□□□□□ -0.6
SMC4-214ENST00000472991 GGA1Q9UJY5 639 aa11.3□□□□□ -0.6
SMC4-214ENST00000472991 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
SMC4-214ENST00000472991 EYA2O00167 538 aa11.29□□□□□ -0.6
SMC4-214ENST00000472991 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
SMC4-214ENST00000472991 TAF5LO75529 589 aa11.29□□□□□ -0.6
SMC4-214ENST00000472991 IRX6P78412 446 aaPredicted RBP11.29□□□□□ -0.6
SMC4-214ENST00000472991 ATP8B2P98198 1209 aa11.29□□□□□ -0.6
SMC4-214ENST00000472991 AOC3Q16853 763 aa11.29□□□□□ -0.6
SMC4-214ENST00000472991 SSH3Q8TE77 659 aa11.29□□□□□ -0.6
SMC4-214ENST00000472991 ANKRD2Q9GZV1 360 aa11.29□□□□□ -0.6
SMC4-214ENST00000472991 COPRSQ9NQ92 184 aa11.29□□□□□ -0.6
SMC4-214ENST00000472991 RIPOR2Q9Y4F9 1068 aa11.29□□□□□ -0.6
SMC4-214ENST00000472991 WTIPA6NIX2 430 aaPredicted RBP11.28□□□□□ -0.6
SMC4-214ENST00000472991 SNAP23O00161 211 aa11.28□□□□□ -0.6
SMC4-214ENST00000472991 CENPBP07199 599 aaPredicted RBP11.28□□□□□ -0.6
SMC4-214ENST00000472991 ATP2B4P23634 1241 aa11.28□□□□□ -0.6
SMC4-214ENST00000472991 PPP4CP60510 307 aa11.28□□□□□ -0.6
SMC4-214ENST00000472991 METTL24Q5JXM2 366 aa11.28□□□□□ -0.6
SMC4-214ENST00000472991 ATG9AQ7Z3C6 839 aa11.28□□□□□ -0.6
SMC4-214ENST00000472991 LARGE2Q8N3Y3 721 aa11.28□□□□□ -0.6
SMC4-214ENST00000472991 ZNF804BA4D1E1 1349 aa11.28□□□□□ -0.6
SMC4-214ENST00000472991 MROH5Q6ZUA9 1318 aa11.28□□□□□ -0.6
SMC4-214ENST00000472991 MED23Q9ULK4 1368 aa11.28□□□□□ -0.6
SMC4-214ENST00000472991 CIAO1O76071 339 aa11.27□□□□□ -0.61
SMC4-214ENST00000472991 KCNJ4P48050 445 aa11.27□□□□□ -0.61
SMC4-214ENST00000472991 KIAA2012Q0VF49 1180 aa11.27□□□□□ -0.61
SMC4-214ENST00000472991 WASHC4Q2M389 1173 aa11.27□□□□□ -0.61
SMC4-214ENST00000472991 RPAP2Q8IXW5 612 aaPredicted RBP11.27□□□□□ -0.61
SMC4-214ENST00000472991 EXOC6Q8TAG9 804 aa11.27□□□□□ -0.61
SMC4-214ENST00000472991 EYA3Q99504 573 aa11.27□□□□□ -0.61
SMC4-214ENST00000472991 LEMD3Q9Y2U8 911 aa11.27□□□□□ -0.61
SMC4-214ENST00000472991 SCN4AP35499 1836 aa11.26□□□□□ -0.61
SMC4-214ENST00000472991 KLRK1P26718 216 aa11.26□□□□□ -0.61
SMC4-214ENST00000472991 IL15P40933 162 aaPredicted RBP11.26□□□□□ -0.61
SMC4-214ENST00000472991 KCNC4Q03721 635 aa11.26□□□□□ -0.61
SMC4-214ENST00000472991 SIRT2Q8IXJ6 389 aa11.26□□□□□ -0.61
SMC4-214ENST00000472991 NIM1KQ8IY84 436 aa11.26□□□□□ -0.61
SMC4-214ENST00000472991 VGLL2Q8N8G2 317 aa11.26□□□□□ -0.61
SMC4-214ENST00000472991 JDP2Q8WYK2 163 aa11.26□□□□□ -0.61
SMC4-214ENST00000472991 ZC3H12CQ9C0D7 883 aaKnown RBP11.26□□□□□ -0.61
SMC4-214ENST00000472991 VPS33BQ9H267 617 aa11.26□□□□□ -0.61
SMC4-214ENST00000472991 WDR90Q96KV7 1748 aa11.26□□□□□ -0.61
SMC4-214ENST00000472991 MYO5AQ9Y4I1 1855 aaKnown RBP11.25□□□□□ -0.61
SMC4-214ENST00000472991 HMMRO75330 724 aa11.25□□□□□ -0.61
SMC4-214ENST00000472991 SURF6O75683 361 aaKnown RBP11.25□□□□□ -0.61
SMC4-214ENST00000472991 PDE8BO95263 885 aa11.25□□□□□ -0.61
SMC4-214ENST00000472991 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.611e-39■■■■■ 140
SMC4-214ENST00000472991 OS9Q13438 667 aaPredicted RBP11.25□□□□□ -0.61
SMC4-214ENST00000472991 TXNRD3Q86VQ6 643 aa11.25□□□□□ -0.61
SMC4-214ENST00000472991 DBNDD1Q9H9R9 158 aa11.25□□□□□ -0.61
SMC4-214ENST00000472991 EXOC6BQ9Y2D4 811 aa11.25□□□□□ -0.61
SMC4-214ENST00000472991 PCDHB15Q9Y5E8 787 aa11.25□□□□□ -0.61
SMC4-214ENST00000472991 ZC3H4Q9UPT8 1303 aaKnown RBP11.25□□□□□ -0.61
SMC4-214ENST00000472991 IRS2Q9Y4H2 1338 aa11.25□□□□□ -0.61
SMC4-214ENST00000472991 ZNF609O15014 1411 aa11.25□□□□□ -0.61
SMC4-214ENST00000472991 ECE2O60344 883 aa11.24□□□□□ -0.61
SMC4-214ENST00000472991 YY1P25490 414 aa11.24□□□□□ -0.61
SMC4-214ENST00000472991 TFCP2Q12800 502 aa11.24□□□□□ -0.61
SMC4-214ENST00000472991 PTGDRQ13258 359 aa11.24□□□□□ -0.61
SMC4-214ENST00000472991 UBE4AQ14139 1066 aa11.24□□□□□ -0.61
SMC4-214ENST00000472991 CEP126Q9P2H0 1117 aa11.24□□□□□ -0.61
SMC4-214ENST00000472991 NOP58Q9Y2X3 529 aaKnown RBP11.24□□□□□ -0.61
SMC4-214ENST00000472991 AKAP11Q9UKA4 1901 aa11.24□□□□□ -0.61
SMC4-214ENST00000472991 ZNF541Q9H0D2 1346 aa11.24□□□□□ -0.61
SMC4-214ENST00000472991 YDJCA8MPS7 323 aa11.23□□□□□ -0.61
SMC4-214ENST00000472991 FZD9O00144 591 aa11.23□□□□□ -0.61
SMC4-214ENST00000472991 SEMA3EO15041 775 aa11.23□□□□□ -0.61
SMC4-214ENST00000472991 SASH1O94885 1247 aa11.23□□□□□ -0.61
SMC4-214ENST00000472991 PUM3Q15397 648 aaKnown RBP11.23□□□□□ -0.61
SMC4-214ENST00000472991 ATP2B3Q16720 1220 aa11.23□□□□□ -0.61
SMC4-214ENST00000472991 C15orf52Q6ZUT6 534 aaKnown RBP11.23□□□□□ -0.61
SMC4-214ENST00000472991 ZNRF3Q9ULT6 936 aa11.23□□□□□ -0.61
SMC4-214ENST00000472991 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.23□□□□□ -0.61
SMC4-214ENST00000472991 ECM29Q5VYK3 1845 aa11.23□□□□□ -0.61
SMC4-214ENST00000472991 IFIT1P09914 478 aaKnown RBP11.22□□□□□ -0.61
SMC4-214ENST00000472991 SLC5A1P13866 664 aa11.22□□□□□ -0.61
SMC4-214ENST00000472991 FGFR2P21802 821 aa11.22□□□□□ -0.61
SMC4-214ENST00000472991 EIF6P56537 245 aaKnown RBP11.22□□□□□ -0.61
SMC4-214ENST00000472991 AAMPQ13685 434 aa11.22□□□□□ -0.61
SMC4-214ENST00000472991 ADAMTSL1Q8N6G6 1762 aa11.21□□□□□ -0.61
SMC4-214ENST00000472991 APBB1O00213 710 aa11.21□□□□□ -0.61
SMC4-214ENST00000472991 RAD17O75943 681 aa11.21□□□□□ -0.61
SMC4-214ENST00000472991 GYG1P46976 350 aa11.21□□□□□ -0.61
SMC4-214ENST00000472991 CXCL9Q07325 125 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms