RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 PCNX4Q63HM2 1172 aa7.78□□□□□ -1.16
PRPF40A-208ENST00000472760 MAP4K3Q8IVH8 894 aa7.78□□□□□ -1.16
PRPF40A-208ENST00000472760 SULF2Q8IWU5 870 aa7.78□□□□□ -1.16
PRPF40A-208ENST00000472760 KLHL23Q8NBE8 558 aa7.78□□□□□ -1.16
PRPF40A-208ENST00000472760 TMEM74Q96NL1 305 aa7.78□□□□□ -1.16
PRPF40A-208ENST00000472760 EMILIN2Q9BXX0 1053 aa7.78□□□□□ -1.16
PRPF40A-208ENST00000472760 CBX8Q9HC52 389 aa7.78□□□□□ -1.16
PRPF40A-208ENST00000472760 PIK3R2O00459 728 aa7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 ARNTP27540 789 aa7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 ZC3H6P61129 1189 aaKnown RBP7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 SNRPNP63162 240 aaKnown RBP7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 RACK1P63244 317 aaKnown RBP7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 AP3B2Q13367 1082 aa7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 LRRC14Q15048 493 aa7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 ZSCAN1Q8NBB4 408 aa7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 KLHDC7BQ96G42 594 aa7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 SRA1Q9HD15 236 aaKnown RBP7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 MKL2Q9ULH7 1088 aa7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 TLR6Q9Y2C9 796 aa7.77□□□□□ -1.17
PRPF40A-208ENST00000472760 SPDYE3A6NKU9 549 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 CYP11A1P05108 521 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 BMP6P22004 513 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 RPS26P62854 115 aaKnown RBP7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 RAC1P63000 192 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 SUZ12Q15022 739 aaKnown RBP7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 SETDB1Q15047 1291 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 AGMOQ6ZNB7 445 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 DTWD1Q8N5C7 304 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 PHC3Q8NDX5 983 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 DCAF11Q8TEB1 546 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 CORO1BQ9BR76 489 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 PLVAPQ9BX97 442 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 ACBD3Q9H3P7 528 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 CYP8B1Q9UNU6 501 aa7.76□□□□□ -1.17
PRPF40A-208ENST00000472760 GNB5O14775 395 aa7.75□□□□□ -1.17
PRPF40A-208ENST00000472760 EIF4A3P38919 411 aaKnown RBP7.75□□□□□ -1.17
PRPF40A-208ENST00000472760 POU4F3Q15319 338 aa7.75□□□□□ -1.17
PRPF40A-208ENST00000472760 LINC00114Q6XXX2 140 aa7.75□□□□□ -1.17
PRPF40A-208ENST00000472760 ILDR2Q71H61 639 aa7.75□□□□□ -1.17
PRPF40A-208ENST00000472760 PODNQ7Z5L7 613 aa7.75□□□□□ -1.17
PRPF40A-208ENST00000472760 STK35Q8TDR2 534 aa7.75□□□□□ -1.17
PRPF40A-208ENST00000472760 TRIM11Q96F44 468 aa7.75□□□□□ -1.17
PRPF40A-208ENST00000472760 C8orf37Q96NL8 207 aa7.75□□□□□ -1.17
PRPF40A-208ENST00000472760 CAPN10Q9HC96 672 aa7.75□□□□□ -1.17
PRPF40A-208ENST00000472760 A0A0A0MRY4 1105 aa7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 PF4P02776 101 aa7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 CD68P34810 354 aaPredicted RBP7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 NLRP12P59046 1061 aa7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 FAM160A1Q05DH4 1040 aa7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 TRIM28Q13263 835 aaKnown RBP7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 GNL2Q13823 731 aaKnown RBP7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 NAALADL2Q58DX5 795 aa7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 LLGL2Q6P1M3 1020 aa7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 GALNT11Q8NCW6 608 aa7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 KCNB2Q92953 911 aa7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 SPON2Q9BUD6 331 aa7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 ZC3H12CQ9C0D7 883 aaKnown RBP7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 INPP5FQ9Y2H2 1132 aa7.74□□□□□ -1.17
PRPF40A-208ENST00000472760 DEAF1O75398 565 aaPredicted RBP7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 GSTP1P09211 210 aaKnown RBP7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 TFE3P19532 575 aaPredicted RBP7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 MAOBP27338 520 aa7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 INSM1Q01101 510 aaPredicted RBP7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 LMNB2Q03252 620 aa7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 CAMK2GQ13555 558 aaPredicted RBP7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 SNAP47Q5SQN1 464 aa7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 MAP1SQ66K74 1059 aaPredicted RBP7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 DIEXFQ68CQ4 756 aaKnown RBP7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 FBXO11Q86XK2 927 aa7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 KIAA0825Q8IV33 1275 aa7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 BEND7Q8N7W2 519 aaPredicted RBP7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 GRIN3AQ8TCU5 1115 aa7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 ZNF296Q8WUU4 475 aaPredicted RBP7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 RHOVQ96L33 236 aa7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 USP26Q9BXU7 913 aa7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 MIR1-1HGQ9H1L0 117 aa7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 PCDHB5Q9Y5E4 795 aa7.73□□□□□ -1.17
PRPF40A-208ENST00000472760 DDX3YO15523 660 aaKnown RBP7.72□□□□□ -1.17
PRPF40A-208ENST00000472760 TNNI2P48788 182 aa7.72□□□□□ -1.17
PRPF40A-208ENST00000472760 HNRNPUQ00839 825 aaKnown RBP eCLIP7.72□□□□□ -1.17
PRPF40A-208ENST00000472760 RASIP1Q5U651 963 aa7.72□□□□□ -1.17
PRPF40A-208ENST00000472760 FMR1NBQ8N0W7 255 aaPredicted RBP7.72□□□□□ -1.17
PRPF40A-208ENST00000472760 GOLM1Q8NBJ4 401 aa7.72□□□□□ -1.17
PRPF40A-208ENST00000472760 JARID2Q92833 1246 aaPredicted RBP7.72□□□□□ -1.17
PRPF40A-208ENST00000472760 NOP53Q9NZM5 478 aaKnown RBP7.72□□□□□ -1.17
PRPF40A-208ENST00000472760 ADAMTS1Q9UHI8 967 aa7.72□□□□□ -1.17
PRPF40A-208ENST00000472760 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 ZNF252P-AS1Q0IIN9 211 aa7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 PAK2Q13177 524 aa7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 PDE3AQ14432 1141 aa7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 FOXD4L6Q3SYB3 417 aaPredicted RBP7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 PRRT3Q5FWE3 981 aa7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 HP1BP3Q5SSJ5 553 aaPredicted RBP7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 FBXL19Q6PCT2 694 aa7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 FOXD4L3Q6VB84 417 aaPredicted RBP7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 PDZD3Q86UT5 571 aa7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 TRIM42Q8IWZ5 723 aa7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 ADAMTS8Q9UP79 889 aa7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 SUPT16HQ9Y5B9 1047 aaKnown RBP7.71□□□□□ -1.18
PRPF40A-208ENST00000472760 TM4SF5O14894 197 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms