RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 CETPP11597 493 aa13.38□□□□□ -0.27
SPC25-203ENST00000472216 PIP4K2AP48426 406 aaPredicted RBP13.38□□□□□ -0.27
SPC25-203ENST00000472216 MTMR14Q8NCE2 650 aa13.38□□□□□ -0.27
SPC25-203ENST00000472216 PRRX2Q99811 253 aa13.38□□□□□ -0.27
SPC25-203ENST00000472216 ZC3H12CQ9C0D7 883 aaKnown RBP13.38□□□□□ -0.27
SPC25-203ENST00000472216 ZNF292O60281 2723 aa13.38□□□□□ -0.27
SPC25-203ENST00000472216 FLNBO75369 2602 aaKnown RBP13.38□□□□□ -0.27
SPC25-203ENST00000472216 ST3GAL2Q16842 350 aa13.37□□□□□ -0.27
SPC25-203ENST00000472216 RIC3Q7Z5B4 369 aa13.37□□□□□ -0.27
SPC25-203ENST00000472216 PRSS33Q8NF86 280 aa13.37□□□□□ -0.27
SPC25-203ENST00000472216 HERVK_113Q902F9 699 aa13.37□□□□□ -0.27
SPC25-203ENST00000472216 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
SPC25-203ENST00000472216 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
SPC25-203ENST00000472216 NCOR2Q9Y618 2525 aa13.37□□□□□ -0.27
SPC25-203ENST00000472216 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
SPC25-203ENST00000472216 COL1A1P02452 1464 aaPredicted RBP13.36□□□□□ -0.27
SPC25-203ENST00000472216 PPARGC1BQ86YN6 1023 aaKnown RBP13.36□□□□□ -0.27
SPC25-203ENST00000472216 ZKSCAN4Q969J2 545 aaPredicted RBP13.36□□□□□ -0.27
SPC25-203ENST00000472216 COG5Q9UP83 839 aa13.36□□□□□ -0.27
SPC25-203ENST00000472216 MAST4O15021 2626 aa13.36□□□□□ -0.27
SPC25-203ENST00000472216 SASH1O94885 1247 aa13.35□□□□□ -0.27
SPC25-203ENST00000472216 DDX46Q7L014 1031 aaKnown RBP13.35□□□□□ -0.27
SPC25-203ENST00000472216 MICALL1Q8N3F8 863 aa13.35□□□□□ -0.27
SPC25-203ENST00000472216 RALYQ9UKM9 306 aaKnown RBP13.35□□□□□ -0.27
SPC25-203ENST00000472216 PPP2R3BQ9Y5P8 575 aa13.35□□□□□ -0.27
SPC25-203ENST00000472216 UBR2Q8IWV8 1755 aa13.35□□□□□ -0.27
SPC25-203ENST00000472216 IBTKQ9P2D0 1353 aaPredicted RBP13.34□□□□□ -0.27
SPC25-203ENST00000472216 RIF1Q5UIP0 2472 aaKnown RBP13.34□□□□□ -0.27
SPC25-203ENST00000472216 GRAPQ13588 217 aa13.34□□□□□ -0.27
SPC25-203ENST00000472216 ZNF790Q6PG37 636 aa13.34□□□□□ -0.27
SPC25-203ENST00000472216 GRAPLQ8TC17 118 aaPredicted RBP13.34□□□□□ -0.27
SPC25-203ENST00000472216 ANKS1AQ92625 1134 aa13.34□□□□□ -0.27
SPC25-203ENST00000472216 BADQ92934 168 aa13.34□□□□□ -0.27
SPC25-203ENST00000472216 FMNL2Q96PY5 1086 aa13.34□□□□□ -0.27
SPC25-203ENST00000472216 CHD9Q3L8U1 2897 aa13.34□□□□□ -0.27
SPC25-203ENST00000472216 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.27
SPC25-203ENST00000472216 SUSD4Q5VX71 490 aa13.33□□□□□ -0.28
SPC25-203ENST00000472216 HFE2Q6ZVN8 426 aa13.33□□□□□ -0.28
SPC25-203ENST00000472216 GJD3Q8N144 294 aa13.33□□□□□ -0.28
SPC25-203ENST00000472216 SCN9AQ15858 1988 aa13.32□□□□□ -0.28
SPC25-203ENST00000472216 DGLUCYQ7Z3D6 616 aa13.32□□□□□ -0.28
SPC25-203ENST00000472216 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
SPC25-203ENST00000472216 ATRNL1Q5VV63 1379 aa13.32□□□□□ -0.28
SPC25-203ENST00000472216 FAM208BQ5VWN6 2430 aa13.31□□□□□ -0.28
SPC25-203ENST00000472216 MYO15AQ9UKN7 3530 aa13.31□□□□□ -0.28
SPC25-203ENST00000472216 USP17L3A6NCW0 530 aa13.31□□□□□ -0.28
SPC25-203ENST00000472216 USP17L4A6NCW7 530 aa13.31□□□□□ -0.28
SPC25-203ENST00000472216 MMP14P50281 582 aa13.31□□□□□ -0.28
SPC25-203ENST00000472216 USP17L1Q7RTZ2 530 aa13.31□□□□□ -0.28
SPC25-203ENST00000472216 LRRC37A2A6NM11 1700 aa13.3□□□□□ -0.28
SPC25-203ENST00000472216 HMGCRP04035 888 aa13.3□□□□□ -0.28
SPC25-203ENST00000472216 SNAPC2Q13487 334 aa13.3□□□□□ -0.28
SPC25-203ENST00000472216 IRF2BPLQ9H1B7 796 aa13.3□□□□□ -0.28
SPC25-203ENST00000472216 POLKQ9UBT6 870 aa13.3□□□□□ -0.28
SPC25-203ENST00000472216 KCNH4Q9UQ05 1017 aa13.3□□□□□ -0.28
SPC25-203ENST00000472216 USP16Q9Y5T5 823 aa13.3□□□□□ -0.28
SPC25-203ENST00000472216 FAM186AA6NE01 2351 aa13.3□□□□□ -0.28
SPC25-203ENST00000472216 TNPO2O14787 897 aaKnown RBP13.29□□□□□ -0.28
SPC25-203ENST00000472216 DCXO43602 365 aa13.29□□□□□ -0.28
SPC25-203ENST00000472216 NTSR2O95665 410 aa13.29□□□□□ -0.28
SPC25-203ENST00000472216 GPTP24298 496 aa13.29□□□□□ -0.28
SPC25-203ENST00000472216 SLC10A5Q5PT55 438 aa13.29□□□□□ -0.28
SPC25-203ENST00000472216 NBPF12Q5TAG4 269 aaPredicted RBP13.29□□□□□ -0.28
SPC25-203ENST00000472216 PPP1R42Q7Z4L9 355 aa13.29□□□□□ -0.28
SPC25-203ENST00000472216 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
SPC25-203ENST00000472216 TBC1D16Q8TBP0 767 aa13.29□□□□□ -0.28
SPC25-203ENST00000472216 FAM86C1Q9NVL1 165 aa13.29□□□□□ -0.28
SPC25-203ENST00000472216 SSTR3P32745 418 aaPredicted RBP13.28□□□□□ -0.28
SPC25-203ENST00000472216 GPSM2P81274 684 aa13.28□□□□□ -0.28
SPC25-203ENST00000472216 TCF15Q12870 199 aa13.28□□□□□ -0.28
SPC25-203ENST00000472216 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.28□□□□□ -0.28
SPC25-203ENST00000472216 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
SPC25-203ENST00000472216 DNAH14Q0VDD8 3507 aa13.28□□□□□ -0.28
SPC25-203ENST00000472216 CHD7Q9P2D1 2997 aa13.27□□□□□ -0.28
SPC25-203ENST00000472216 ERVV-1B6SEH8 477 aa13.27□□□□□ -0.29
SPC25-203ENST00000472216 PDHXO00330 501 aa13.27□□□□□ -0.29
SPC25-203ENST00000472216 HOXB3P14651 431 aaPredicted RBP13.27□□□□□ -0.29
SPC25-203ENST00000472216 IER5LQ5T953 404 aa13.27□□□□□ -0.29
SPC25-203ENST00000472216 CCDC129Q6ZRS4 1044 aa13.27□□□□□ -0.29
SPC25-203ENST00000472216 HLA-CQ95604 372 aa13.27□□□□□ -0.29
SPC25-203ENST00000472216 SENP6Q9GZR1 1112 aaPredicted RBP13.27□□□□□ -0.29
SPC25-203ENST00000472216 PRDM5Q9NQX1 630 aaPredicted RBP13.27□□□□□ -0.29
SPC25-203ENST00000472216 CSADQ9Y600 493 aa13.27□□□□□ -0.29
SPC25-203ENST00000472216 UBN2Q6ZU65 1347 aa13.27□□□□□ -0.29
SPC25-203ENST00000472216 LTBP2Q14767 1821 aa13.27□□□□□ -0.29
SPC25-203ENST00000472216 BCRP11274 1271 aa13.26□□□□□ -0.29
SPC25-203ENST00000472216 VGLL4Q14135 290 aa13.26□□□□□ -0.29
SPC25-203ENST00000472216 ATOH1Q92858 354 aaPredicted RBP13.26□□□□□ -0.29
SPC25-203ENST00000472216 PBX4Q9BYU1 374 aa13.26□□□□□ -0.29
SPC25-203ENST00000472216 MAP3K9P80192 1104 aa13.25□□□□□ -0.29
SPC25-203ENST00000472216 ASCL5Q7RTU5 278 aa13.25□□□□□ -0.29
SPC25-203ENST00000472216 ANKRD23Q86SG2 305 aa13.25□□□□□ -0.29
SPC25-203ENST00000472216 COA7Q96BR5 231 aa13.25□□□□□ -0.29
SPC25-203ENST00000472216 SH2B1Q9NRF2 756 aaPredicted RBP13.25□□□□□ -0.29
SPC25-203ENST00000472216 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
SPC25-203ENST00000472216 SOWAHBA6NEL2 793 aa13.24□□□□□ -0.29
SPC25-203ENST00000472216 SPDYE2BA6NHP3 402 aa13.24□□□□□ -0.29
SPC25-203ENST00000472216 SPDYE6P0CI01 402 aa13.24□□□□□ -0.29
SPC25-203ENST00000472216 ATN1P54259 1190 aaPredicted RBP13.24□□□□□ -0.29
SPC25-203ENST00000472216 RTP1P59025 263 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms