RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 TEKT1Q969V4 418 aa11.29□□□□□ -0.6
SYN3-211ENST00000472027 CAPNS2Q96L46 248 aa11.29□□□□□ -0.6
SYN3-211ENST00000472027 DEFB129Q9H1M3 183 aa11.29□□□□□ -0.6
SYN3-211ENST00000472027 TDRD3Q9H7E2 651 aaKnown RBP11.29□□□□□ -0.6
SYN3-211ENST00000472027 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
SYN3-211ENST00000472027 AOX1Q06278 1338 aa11.29□□□□□ -0.6
SYN3-211ENST00000472027 POLR2AP24928 1970 aaKnown RBP11.28□□□□□ -0.6
SYN3-211ENST00000472027 TRPM7Q96QT4 1865 aa11.28□□□□□ -0.6
SYN3-211ENST00000472027 COL1A1P02452 1464 aaPredicted RBP11.28□□□□□ -0.6
SYN3-211ENST00000472027 PRDX5P30044 214 aa11.28□□□□□ -0.6
SYN3-211ENST00000472027 RASGRF1Q13972 1273 aa11.28□□□□□ -0.6
SYN3-211ENST00000472027 TNNI3KQ59H18 835 aa11.28□□□□□ -0.6
SYN3-211ENST00000472027 SIRT2Q8IXJ6 389 aa11.28□□□□□ -0.6
SYN3-211ENST00000472027 ZDHHC15Q96MV8 337 aa11.28□□□□□ -0.6
SYN3-211ENST00000472027 VEZTQ9HBM0 779 aa11.28□□□□□ -0.6
SYN3-211ENST00000472027 ZNF70Q9UC06 446 aaPredicted RBP11.28□□□□□ -0.6
SYN3-211ENST00000472027 FPGT-TNNI3KV9GXZ4 949 aa11.28□□□□□ -0.6
SYN3-211ENST00000472027 MAST3O60307 1309 aa11.28□□□□□ -0.6
SYN3-211ENST00000472027 SALL1Q9NSC2 1324 aa11.28□□□□□ -0.6
SYN3-211ENST00000472027 LDHBP07195 334 aaKnown RBP11.27□□□□□ -0.61
SYN3-211ENST00000472027 HSPA1AP0DMV8 641 aaKnown RBP11.27□□□□□ -0.61
SYN3-211ENST00000472027 HSPA1BP0DMV9 641 aaKnown RBP11.27□□□□□ -0.61
SYN3-211ENST00000472027 NF2P35240 595 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 FKBP1BP68106 108 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 RASA3Q14644 834 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 SPDYE2Q495Y8 402 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 APOBEC3HQ6NTF7 200 aaKnown RBP11.27□□□□□ -0.61
SYN3-211ENST00000472027 RGMBQ6NW40 437 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 HHIPL2Q6UWX4 724 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 MOB2Q70IA6 237 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 EXOC6BQ9Y2D4 811 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 PPP2R3BQ9Y5P8 575 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 CEP350Q5VT06 3117 aa11.27□□□□□ -0.61
SYN3-211ENST00000472027 TCP10L2B9ZVM9 353 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 AOC2O75106 756 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 HMMRO75330 724 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 UQCRFS1P1P0C7P4 283 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 ARID4AP29374 1257 aaPredicted RBP11.26□□□□□ -0.61
SYN3-211ENST00000472027 MAP2K2P36507 400 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 ZNF157P51786 506 aaPredicted RBP11.26□□□□□ -0.61
SYN3-211ENST00000472027 HSP90AB4PQ58FF6 505 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 CCDC158Q5M9N0 1113 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 ERC1Q8IUD2 1116 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 ZGPATQ8N5A5 531 aaKnown RBP11.26□□□□□ -0.61
SYN3-211ENST00000472027 SPATA5Q8NB90 893 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 EAF2Q96CJ1 260 aaPredicted RBP11.26□□□□□ -0.61
SYN3-211ENST00000472027 DBNDD2Q9BQY9 259 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 CCDC8Q9H0W5 538 aaPredicted RBP11.26□□□□□ -0.61
SYN3-211ENST00000472027 ABCF2Q9UG63 623 aa11.26□□□□□ -0.61
SYN3-211ENST00000472027 PDS5AQ29RF7 1337 aaKnown RBP11.26□□□□□ -0.61
SYN3-211ENST00000472027 MCAMP43121 646 aa11.25□□□□□ -0.61
SYN3-211ENST00000472027 RRP1P56182 461 aaKnown RBP11.25□□□□□ -0.61
SYN3-211ENST00000472027 TNFAIP1Q13829 316 aa11.25□□□□□ -0.61
SYN3-211ENST00000472027 PRKG1Q13976 671 aa11.25□□□□□ -0.61
SYN3-211ENST00000472027 TTLL12Q14166 644 aaPredicted RBP11.25□□□□□ -0.61
SYN3-211ENST00000472027 DIXDC1Q155Q3 683 aa11.25□□□□□ -0.61
SYN3-211ENST00000472027 SUPT20HL1Q3ZLR7 823 aa11.25□□□□□ -0.61
SYN3-211ENST00000472027 TTC39AQ5SRH9 613 aa11.25□□□□□ -0.61
SYN3-211ENST00000472027 NBPF12Q5TAG4 269 aaPredicted RBP11.25□□□□□ -0.61
SYN3-211ENST00000472027 SPTY2D1Q68D10 685 aaPredicted RBP11.25□□□□□ -0.61
SYN3-211ENST00000472027 PI16Q6UXB8 463 aa11.25□□□□□ -0.61
SYN3-211ENST00000472027 RHPN1Q8TCX5 695 aa11.25□□□□□ -0.61
SYN3-211ENST00000472027 CCDC102AQ96A19 550 aa11.25□□□□□ -0.61
SYN3-211ENST00000472027 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
SYN3-211ENST00000472027 FAM155AB1AL88 458 aaPredicted RBP11.24□□□□□ -0.61
SYN3-211ENST00000472027 TNNI2P48788 182 aa11.24□□□□□ -0.61
SYN3-211ENST00000472027 CACNB3P54284 484 aa11.24□□□□□ -0.61
SYN3-211ENST00000472027 MAP2K1Q02750 393 aaPredicted RBP11.24□□□□□ -0.61
SYN3-211ENST00000472027 TBC1D9Q6ZT07 1266 aa11.24□□□□□ -0.61
SYN3-211ENST00000472027 ERICH6Q7L0X2 663 aa11.24□□□□□ -0.61
SYN3-211ENST00000472027 ARMC9Q7Z3E5 817 aa11.24□□□□□ -0.61
SYN3-211ENST00000472027 IL1RAPL2Q9NP60 686 aa11.24□□□□□ -0.61
SYN3-211ENST00000472027 TLR7Q9NYK1 1049 aaKnown RBP11.24□□□□□ -0.61
SYN3-211ENST00000472027 TMOD2Q9NZR1 351 aa11.24□□□□□ -0.61
SYN3-211ENST00000472027 DBNLQ9UJU6 430 aaKnown RBP11.24□□□□□ -0.61
SYN3-211ENST00000472027 ANGEL1Q9UNK9 670 aaKnown RBP11.24□□□□□ -0.61
SYN3-211ENST00000472027 FZD1Q9UP38 647 aa11.24□□□□□ -0.61
SYN3-211ENST00000472027 DAGLAQ9Y4D2 1042 aa11.24□□□□□ -0.61
SYN3-211ENST00000472027 ARAP2Q8WZ64 1704 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 APBB1O00213 710 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 PPP1R12BO60237 982 aaPredicted RBP11.23□□□□□ -0.61
SYN3-211ENST00000472027 RAB11FIP3O75154 756 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 MECOMQ03112 1051 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 NOGQ13253 232 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 CDC42EP5Q6NZY7 148 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 AACSQ86V21 672 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 DZIP1Q86YF9 867 aaKnown RBP11.23□□□□□ -0.61
SYN3-211ENST00000472027 KIF1BPQ96EK5 621 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
SYN3-211ENST00000472027 ZNF512BQ96KM6 892 aaPredicted RBP11.23□□□□□ -0.61
SYN3-211ENST00000472027 TEPSINQ96N21 525 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 ZIC5Q96T25 663 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 TMEM39BQ9GZU3 492 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 SNRKQ9NRH2 765 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 USP40Q9NVE5 1235 aa11.23□□□□□ -0.61
SYN3-211ENST00000472027 FOXN1O15353 648 aa11.22□□□□□ -0.61
SYN3-211ENST00000472027 USP2O75604 605 aaPredicted RBP11.22□□□□□ -0.61
SYN3-211ENST00000472027 SLC10A3P09131 477 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms