RNA–Protein interactions for RNA: ENST00000471917.1

LPP-213, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-213ENST00000471917 TRIM44Q96DX7 344 aaPredicted RBP11.22□□□□□ -0.61
LPP-213ENST00000471917 DBNDD2Q9BQY9 259 aa11.22□□□□□ -0.61
LPP-213ENST00000471917 PLA2G12BQ9BX93 195 aa11.22□□□□□ -0.61
LPP-213ENST00000471917 ZBTB3Q9H5J0 574 aa11.22□□□□□ -0.61
LPP-213ENST00000471917 CEP126Q9P2H0 1117 aa11.22□□□□□ -0.61
LPP-213ENST00000471917 LAMB1P07942 1786 aa11.21□□□□□ -0.61
LPP-213ENST00000471917 HSPA8P11142 646 aaKnown RBP11.21□□□□□ -0.61
LPP-213ENST00000471917 SYT1P21579 422 aa11.21□□□□□ -0.61
LPP-213ENST00000471917 CTCFP49711 727 aaPredicted RBP11.21□□□□□ -0.61
LPP-213ENST00000471917 SCNN1DP51172 638 aa11.21□□□□□ -0.61
LPP-213ENST00000471917 HLFQ16534 295 aa11.21□□□□□ -0.61
LPP-213ENST00000471917 ADCK5Q3MIX3 580 aa11.21□□□□□ -0.61
LPP-213ENST00000471917 FOXD4L5Q5VV16 416 aaPredicted RBP11.21□□□□□ -0.61
LPP-213ENST00000471917 LRSAM1Q6UWE0 723 aa11.21□□□□□ -0.61
LPP-213ENST00000471917 FOXD4L4Q8WXT5 416 aaPredicted RBP11.21□□□□□ -0.61
LPP-213ENST00000471917 NEUROD6Q96NK8 337 aa11.21□□□□□ -0.61
LPP-213ENST00000471917 DNAJC2Q99543 621 aaKnown RBP11.21□□□□□ -0.61
LPP-213ENST00000471917 PANK2Q9BZ23 570 aa11.21□□□□□ -0.61
LPP-213ENST00000471917 NIP7Q9Y221 180 aaKnown RBP eCLIP11.21□□□□□ -0.61
LPP-213ENST00000471917 CDHR2Q9BYE9 1310 aa11.2□□□□□ -0.62
LPP-213ENST00000471917 AKAP11Q9UKA4 1901 aa11.2□□□□□ -0.62
LPP-213ENST00000471917 F13A1P00488 732 aa11.2□□□□□ -0.62
LPP-213ENST00000471917 GJB2P29033 226 aa11.2□□□□□ -0.62
LPP-213ENST00000471917 HOXA10P31260 410 aaPredicted RBP11.2□□□□□ -0.62
LPP-213ENST00000471917 CCDC158Q5M9N0 1113 aa11.2□□□□□ -0.62
LPP-213ENST00000471917 TPTE2Q6XPS3 522 aa11.2□□□□□ -0.62
LPP-213ENST00000471917 PNMA8AQ86V59 439 aaPredicted RBP11.2□□□□□ -0.62
LPP-213ENST00000471917 CCDC83Q8IWF9 413 aa11.2□□□□□ -0.62
LPP-213ENST00000471917 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
LPP-213ENST00000471917 PPP1R9BQ96SB3 815 aa11.2□□□□□ -0.62
LPP-213ENST00000471917 DSCC1Q9BVC3 393 aa11.2□□□□□ -0.62
LPP-213ENST00000471917 PAG1Q9NWQ8 432 aa11.2□□□□□ -0.62
LPP-213ENST00000471917 ZNF609O15014 1411 aa11.19□□□□□ -0.62
LPP-213ENST00000471917 SPEF2Q9C093 1822 aa11.19□□□□□ -0.62
LPP-213ENST00000471917 MAP3K15Q6ZN16 1313 aa11.19□□□□□ -0.62
LPP-213ENST00000471917 ERVV-1B6SEH8 477 aa11.19□□□□□ -0.62
LPP-213ENST00000471917 SLC34A2O95436 690 aa11.19□□□□□ -0.62
LPP-213ENST00000471917 MYCNP04198 464 aaPredicted RBP11.19□□□□□ -0.62
LPP-213ENST00000471917 ZFYP08048 801 aaPredicted RBP11.19□□□□□ -0.62
LPP-213ENST00000471917 IFIT1P09914 478 aaKnown RBP11.19□□□□□ -0.62
LPP-213ENST00000471917 CPA1P15085 419 aa11.19□□□□□ -0.62
LPP-213ENST00000471917 TAF7LQ5H9L4 462 aa11.19□□□□□ -0.62
LPP-213ENST00000471917 GIGYF2Q6Y7W6 1299 aaKnown RBP11.19□□□□□ -0.62
LPP-213ENST00000471917 USP48Q86UV5 1035 aa11.19□□□□□ -0.62
LPP-213ENST00000471917 NEK1Q96PY6 1258 aa11.19□□□□□ -0.62
LPP-213ENST00000471917 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
LPP-213ENST00000471917 NPHP1O15259 732 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 NTSR2O95665 410 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 CSF1RP07333 972 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 ALDH1B1P30837 517 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 LBX1P52954 281 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 UBE2HP62256 183 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 ME3Q16798 604 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 ZMYM1Q5SVZ6 1142 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 GORABQ5T7V8 394 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 MAP1SQ66K74 1059 aaPredicted RBP11.18□□□□□ -0.62
LPP-213ENST00000471917 CC2D2BQ6DHV5 1058 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 ZNF589Q86UQ0 364 aaPredicted RBP11.18□□□□□ -0.62
LPP-213ENST00000471917 SYNE4Q8N205 404 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 TMEM63CQ9P1W3 806 aa11.18□□□□□ -0.62
LPP-213ENST00000471917 A0A1B0GUL7 405 aa11.17□□□□□ -0.62
LPP-213ENST00000471917 GOLIM4O00461 696 aa11.17□□□□□ -0.62
LPP-213ENST00000471917 RNF113AO15541 343 aaKnown RBP11.17□□□□□ -0.62
LPP-213ENST00000471917 LARGE1O95461 756 aa11.17□□□□□ -0.62
LPP-213ENST00000471917 TIMM10P62072 90 aa11.17□□□□□ -0.62
LPP-213ENST00000471917 IFIT5Q13325 482 aaKnown RBP11.17□□□□□ -0.62
LPP-213ENST00000471917 HS1BP3Q53T59 392 aa11.17□□□□□ -0.62
LPP-213ENST00000471917 EAPPQ56P03 285 aaPredicted RBP11.17□□□□□ -0.62
LPP-213ENST00000471917 TTC39AQ5SRH9 613 aa11.17□□□□□ -0.62
LPP-213ENST00000471917 LARP1BQ659C4 914 aaKnown RBP11.17□□□□□ -0.62
LPP-213ENST00000471917 SAMD1Q6SPF0 538 aaPredicted RBP11.17□□□□□ -0.62
LPP-213ENST00000471917 EDC3Q96F86 508 aaKnown RBP11.17□□□□□ -0.62
LPP-213ENST00000471917 CTNNA3Q9UI47 895 aa11.17□□□□□ -0.62
LPP-213ENST00000471917 TPCN1Q9ULQ1 816 aa11.17□□□□□ -0.62
LPP-213ENST00000471917 MTMR6Q9Y217 621 aa11.17□□□□□ -0.62
LPP-213ENST00000471917 MYH3P11055 1940 aa11.17□□□□□ -0.62
LPP-213ENST00000471917 TOB2Q14106 344 aaPredicted RBP11.16□□□□□ -0.62
LPP-213ENST00000471917 DEFB115Q30KQ5 88 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 LRRC24Q50LG9 513 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 CCDC183Q5T5S1 534 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 DDX46Q7L014 1031 aaKnown RBP11.16□□□□□ -0.62
LPP-213ENST00000471917 FAM184AQ8NB25 1140 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 AIDAQ96BJ3 306 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 CRAMP1Q96RY5 1269 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 LLPHQ9BRT6 129 aaKnown RBP11.16□□□□□ -0.62
LPP-213ENST00000471917 NYXQ9GZU5 481 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 TSPY26PQ9H489 355 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 RBM27Q9P2N5 1060 aaKnown RBP11.16□□□□□ -0.62
LPP-213ENST00000471917 KIF3AQ9Y496 699 aa11.16□□□□□ -0.62
LPP-213ENST00000471917 SYCE3A1L190 88 aa11.15□□□□□ -0.62
LPP-213ENST00000471917 ANKRD18BA2A2Z9 1011 aa11.15□□□□□ -0.62
LPP-213ENST00000471917 HSP90B1P14625 803 aaKnown RBP11.15□□□□□ -0.62
LPP-213ENST00000471917 KRT85P78386 507 aa11.15□□□□□ -0.62
LPP-213ENST00000471917 FGD1P98174 961 aa11.15□□□□□ -0.62
LPP-213ENST00000471917 MAP2K1Q02750 393 aaPredicted RBP11.15□□□□□ -0.62
LPP-213ENST00000471917 FMR1Q06787 632 aaKnown RBP eCLIP11.15□□□□□ -0.62
LPP-213ENST00000471917 GRIPAP1Q4V328 841 aa11.15□□□□□ -0.62
LPP-213ENST00000471917 CST9Q5W186 159 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms