RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 TAGLNQ01995 201 aaKnown RBP9□□□□□ -0.97
HDAC9-221ENST00000471887 TMC4Q7Z404 712 aa9□□□□□ -0.97
HDAC9-221ENST00000471887 UBASH3BQ8TF42 649 aa9□□□□□ -0.97
HDAC9-221ENST00000471887 GIPC2Q8TF65 315 aa9□□□□□ -0.97
HDAC9-221ENST00000471887 SPOCK3Q9BQ16 436 aa9□□□□□ -0.97
HDAC9-221ENST00000471887 USP26Q9BXU7 913 aa9□□□□□ -0.97
HDAC9-221ENST00000471887 TMEM39AQ9NV64 488 aa9□□□□□ -0.97
HDAC9-221ENST00000471887 PPM1HQ9ULR3 514 aa9□□□□□ -0.97
HDAC9-221ENST00000471887 IREB2P48200 963 aaKnown RBP8.99□□□□□ -0.97
HDAC9-221ENST00000471887 ZNF157P51786 506 aaPredicted RBP8.99□□□□□ -0.97
HDAC9-221ENST00000471887 PPP2R3AQ06190 1150 aa8.99□□□□□ -0.97
HDAC9-221ENST00000471887 AGGF1Q8N302 714 aaeCLIP8.99□□□□□ -0.97
HDAC9-221ENST00000471887 MRS2Q9HD23 443 aa8.99□□□□□ -0.97
HDAC9-221ENST00000471887 ALX3O95076 343 aa8.98□□□□□ -0.97
HDAC9-221ENST00000471887 PROCP04070 461 aa8.98□□□□□ -0.97
HDAC9-221ENST00000471887 NOS3P29474 1203 aa8.98□□□□□ -0.97
HDAC9-221ENST00000471887 AP3B2Q13367 1082 aa8.98□□□□□ -0.97
HDAC9-221ENST00000471887 KIAA1211Q6ZU35 1233 aa8.98□□□□□ -0.97
HDAC9-221ENST00000471887 CEP44Q9C0F1 390 aa8.98□□□□□ -0.97
HDAC9-221ENST00000471887 RNF208Q9H0X6 261 aa8.98□□□□□ -0.97
HDAC9-221ENST00000471887 BCL11AQ9H165 835 aa8.98□□□□□ -0.97
HDAC9-221ENST00000471887 LOC100289279A0A1B0GTE1 492 aa8.97□□□□□ -0.97
HDAC9-221ENST00000471887 SORBS3O60504 671 aa8.97□□□□□ -0.97
HDAC9-221ENST00000471887 POU4F3Q15319 338 aa8.97□□□□□ -0.97
HDAC9-221ENST00000471887 TPTE2Q6XPS3 522 aa8.97□□□□□ -0.97
HDAC9-221ENST00000471887 ANKRD24Q8TF21 1146 aa8.97□□□□□ -0.97
HDAC9-221ENST00000471887 FAM161BQ96MY7 647 aa8.97□□□□□ -0.97
HDAC9-221ENST00000471887 CORO1BQ9BR76 489 aa8.97□□□□□ -0.97
HDAC9-221ENST00000471887 TRIM56Q9BRZ2 755 aaKnown RBP8.97□□□□□ -0.97
HDAC9-221ENST00000471887 RUSC1Q9BVN2 902 aa8.97□□□□□ -0.97
HDAC9-221ENST00000471887 NRSN2Q9GZP1 204 aa8.97□□□□□ -0.97
HDAC9-221ENST00000471887 CCDC9Q9Y3X0 531 aaKnown RBP8.97□□□□□ -0.97
HDAC9-221ENST00000471887 MAOBP27338 520 aa8.96□□□□□ -0.98
HDAC9-221ENST00000471887 HP1BP3Q5SSJ5 553 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-221ENST00000471887 TTF2Q9UNY4 1162 aaKnown RBP8.96□□□□□ -0.98
HDAC9-221ENST00000471887 GLB1P16278 677 aa8.95□□□□□ -0.98
HDAC9-221ENST00000471887 Q6ZS46 218 aa8.95□□□□□ -0.98
HDAC9-221ENST00000471887 NECAB3Q96P71 396 aaPredicted RBP8.95□□□□□ -0.98
HDAC9-221ENST00000471887 CEP41Q9BYV8 373 aa8.95□□□□□ -0.98
HDAC9-221ENST00000471887 MEGF11A6BM72 1044 aa8.94□□□□□ -0.98
HDAC9-221ENST00000471887 FBXO24O75426 580 aa8.94□□□□□ -0.98
HDAC9-221ENST00000471887 EXOSC6Q5RKV6 272 aaKnown RBP8.94□□□□□ -0.98
HDAC9-221ENST00000471887 MEGF10Q96KG7 1140 aa8.94□□□□□ -0.98
HDAC9-221ENST00000471887 ZNF16P17020 682 aaPredicted RBP8.93□□□□□ -0.98
HDAC9-221ENST00000471887 NUTM2GQ5VZR2 741 aa8.93□□□□□ -0.98
HDAC9-221ENST00000471887 ANKRD34AQ69YU3 496 aa8.93□□□□□ -0.98
HDAC9-221ENST00000471887 FDX2Q6P4F2 183 aa8.93□□□□□ -0.98
HDAC9-221ENST00000471887 DZIP1LQ8IYY4 767 aaKnown RBP8.93□□□□□ -0.98
HDAC9-221ENST00000471887 TMPRSS13Q9BYE2 586 aa8.93□□□□□ -0.98
HDAC9-221ENST00000471887 CYP4F12Q9HCS2 524 aa8.93□□□□□ -0.98
HDAC9-221ENST00000471887 VTI1BQ9UEU0 232 aa8.93□□□□□ -0.98
HDAC9-221ENST00000471887 SAMM50Q9Y512 469 aa8.93□□□□□ -0.98
HDAC9-221ENST00000471887 ENC1O14682 589 aa8.92□□□□□ -0.98
HDAC9-221ENST00000471887 DLGAP3O95886 979 aa8.92□□□□□ -0.98
HDAC9-221ENST00000471887 NME2P22392 152 aa8.92□□□□□ -0.98
HDAC9-221ENST00000471887 HNRNPUQ00839 825 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC9-221ENST00000471887 SULF2Q8IWU5 870 aa8.92□□□□□ -0.98
HDAC9-221ENST00000471887 SSBP4Q9BWG4 385 aaPredicted RBP8.92□□□□□ -0.98
HDAC9-221ENST00000471887 TPSG1Q9NRR2 321 aa8.92□□□□□ -0.98
HDAC9-221ENST00000471887 LOC100996750A0A140TA64 210 aa8.91□□□□□ -0.98
HDAC9-221ENST00000471887 RBM47A0AV96 593 aaKnown RBP8.91□□□□□ -0.98
HDAC9-221ENST00000471887 ECEL1O95672 775 aa8.91□□□□□ -0.98
HDAC9-221ENST00000471887 CTSBP07858 339 aa8.91□□□□□ -0.98
HDAC9-221ENST00000471887 GSTP1P09211 210 aaKnown RBP8.91□□□□□ -0.98
HDAC9-221ENST00000471887 DOC2BQ14184 412 aa8.91□□□□□ -0.98
HDAC9-221ENST00000471887 PDE3AQ14432 1141 aa8.91□□□□□ -0.98
HDAC9-221ENST00000471887 SV2BQ7L1I2 683 aa8.91□□□□□ -0.98
HDAC9-221ENST00000471887 TP53INP1Q96A56 240 aa8.91□□□□□ -0.98
HDAC9-221ENST00000471887 CRELD1Q96HD1 420 aa8.91□□□□□ -0.98
HDAC9-221ENST00000471887 EMILIN2Q9BXX0 1053 aa8.91□□□□□ -0.98
HDAC9-221ENST00000471887 KRTAP4-6Q9BYQ5 205 aa8.91□□□□□ -0.98
HDAC9-221ENST00000471887 SART1O43290 800 aaKnown RBP8.9□□□□□ -0.98
HDAC9-221ENST00000471887 ARNTP27540 789 aa8.9□□□□□ -0.98
HDAC9-221ENST00000471887 TAF1CQ15572 869 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-221ENST00000471887 UVSSAQ2YD98 709 aa8.9□□□□□ -0.98
HDAC9-221ENST00000471887 MEI1Q5TIA1 1274 aa8.9□□□□□ -0.98
HDAC9-221ENST00000471887 SMG8Q8ND04 991 aaKnown RBP8.9□□□□□ -0.98
HDAC9-221ENST00000471887 RGS22Q8NE09 1264 aa8.9□□□□□ -0.98
HDAC9-221ENST00000471887 UBL7Q96S82 380 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-221ENST00000471887 ZC3H12CQ9C0D7 883 aaKnown RBP8.9□□□□□ -0.98
HDAC9-221ENST00000471887 SUGCTQ9HAC7 445 aa8.9□□□□□ -0.98
HDAC9-221ENST00000471887 CELA3AP09093 270 aa8.89□□□□□ -0.99
HDAC9-221ENST00000471887 CTSHP09668 335 aa8.89□□□□□ -0.99
HDAC9-221ENST00000471887 ST13P50502 369 aaKnown RBP8.89□□□□□ -0.99
HDAC9-221ENST00000471887 CCDC85BQ15834 202 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-221ENST00000471887 C12orf50Q8NA57 414 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-221ENST00000471887 CBX8Q9HC52 389 aa8.89□□□□□ -0.99
HDAC9-221ENST00000471887 RAD18Q9NS91 495 aa8.89□□□□□ -0.99
HDAC9-221ENST00000471887 PODXL2Q9NZ53 605 aa8.89□□□□□ -0.99
HDAC9-221ENST00000471887 PAGE1O75459 146 aa8.88□□□□□ -0.99
HDAC9-221ENST00000471887 PDZD3Q86UT5 571 aa8.88□□□□□ -0.99
HDAC9-221ENST00000471887 STK35Q8TDR2 534 aa8.88□□□□□ -0.99
HDAC9-221ENST00000471887 KCNB2Q92953 911 aa8.88□□□□□ -0.99
HDAC9-221ENST00000471887 FAM46AQ96IP4 442 aaKnown RBP8.88□□□□□ -0.99
HDAC9-221ENST00000471887 KRT82Q9NSB4 513 aa8.88□□□□□ -0.99
HDAC9-221ENST00000471887 USP31Q70CQ4 1352 aa8.87□□□□□ -0.99
HDAC9-221ENST00000471887 MRPL58Q14197 206 aaKnown RBP8.87□□□□□ -0.99
HDAC9-221ENST00000471887 UTP4Q969X6 686 aaKnown RBP8.87□□□□□ -0.99
HDAC9-221ENST00000471887 CCDC86Q9H6F5 360 aaKnown RBP8.87□□□□□ -0.99
HDAC9-221ENST00000471887 GAS2O43903 313 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms