RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 FGFR2P21802 821 aa16.36■□□□□ 0.21
LTA-215ENST00000471842 RASA3Q14644 834 aa16.36■□□□□ 0.21
LTA-215ENST00000471842 NBPF12Q5TAG4 269 aaPredicted RBP16.36■□□□□ 0.21
LTA-215ENST00000471842 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
LTA-215ENST00000471842 ATF7IPQ6VMQ6 1270 aa16.36■□□□□ 0.21
LTA-215ENST00000471842 SSC5DA1L4H1 1573 aa16.36■□□□□ 0.21
LTA-215ENST00000471842 PPP1R12BO60237 982 aaPredicted RBP16.35■□□□□ 0.21
LTA-215ENST00000471842 CIAO1O76071 339 aa16.35■□□□□ 0.21
LTA-215ENST00000471842 TNFAIP1Q13829 316 aa16.35■□□□□ 0.21
LTA-215ENST00000471842 SUPT20HL1Q3ZLR7 823 aa16.35■□□□□ 0.21
LTA-215ENST00000471842 SPDYE2Q495Y8 402 aa16.35■□□□□ 0.21
LTA-215ENST00000471842 TEKT1Q969V4 418 aa16.35■□□□□ 0.21
LTA-215ENST00000471842 ABHD8Q96I13 439 aa16.35■□□□□ 0.21
LTA-215ENST00000471842 IL15P40933 162 aaPredicted RBP16.35■□□□□ 0.21
LTA-215ENST00000471842 CACNB3P54284 484 aa16.35■□□□□ 0.21
LTA-215ENST00000471842 DGKZQ13574 1117 aa16.35■□□□□ 0.21
LTA-215ENST00000471842 GNL3LQ9NVN8 582 aaKnown RBP16.35■□□□□ 0.21
LTA-215ENST00000471842 SAGE1Q9NXZ1 904 aa16.35■□□□□ 0.21
LTA-215ENST00000471842 TNNI2P48788 182 aa16.34■□□□□ 0.21
LTA-215ENST00000471842 ZKSCAN2Q63HK3 967 aa16.34■□□□□ 0.21
LTA-215ENST00000471842 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
LTA-215ENST00000471842 SLC10A4Q96EP9 437 aa16.34■□□□□ 0.21
LTA-215ENST00000471842 CLMNQ96JQ2 1002 aa16.34■□□□□ 0.21
LTA-215ENST00000471842 TMOD2Q9NZR1 351 aa16.34■□□□□ 0.21
LTA-215ENST00000471842 MAST3O60307 1309 aa16.34■□□□□ 0.21
LTA-215ENST00000471842 CCDC85CA6NKD9 419 aa16.33■□□□□ 0.2
LTA-215ENST00000471842 GNAI2P04899 355 aa16.33■□□□□ 0.2
LTA-215ENST00000471842 IREB2P48200 963 aaKnown RBP16.33■□□□□ 0.2
LTA-215ENST00000471842 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.2
LTA-215ENST00000471842 TMEM57Q8N5G2 664 aa16.33■□□□□ 0.2
LTA-215ENST00000471842 TMEM39BQ9GZU3 492 aa16.33■□□□□ 0.2
LTA-215ENST00000471842 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
LTA-215ENST00000471842 TBC1D8O95759 1140 aa16.32■□□□□ 0.2
LTA-215ENST00000471842 ADORA1P30542 326 aa16.32■□□□□ 0.2
LTA-215ENST00000471842 SREBF2Q12772 1141 aa16.32■□□□□ 0.2
LTA-215ENST00000471842 CDAN1Q8IWY9 1227 aa16.32■□□□□ 0.2
LTA-215ENST00000471842 WDR66Q8TBY9 1149 aa16.32■□□□□ 0.2
LTA-215ENST00000471842 MCOLN1Q9GZU1 580 aa16.32■□□□□ 0.2
LTA-215ENST00000471842 COPRSQ9NQ92 184 aa16.32■□□□□ 0.2
LTA-215ENST00000471842 PHKA1P46020 1223 aa16.31■□□□□ 0.2
LTA-215ENST00000471842 TFCP2Q12800 502 aa16.31■□□□□ 0.2
LTA-215ENST00000471842 LDLRAD1Q5T700 205 aa16.31■□□□□ 0.2
LTA-215ENST00000471842 SPRYD7Q5W111 196 aa16.31■□□□□ 0.2
LTA-215ENST00000471842 ITPRIPQ8IWB1 547 aa16.31■□□□□ 0.2
LTA-215ENST00000471842 MYH13Q9UKX3 1938 aa16.31■□□□□ 0.2
LTA-215ENST00000471842 DIXDC1Q155Q3 683 aa16.3■□□□□ 0.2
LTA-215ENST00000471842 NEUROD6Q96NK8 337 aa16.3■□□□□ 0.2
LTA-215ENST00000471842 ELP3Q9H9T3 547 aa16.3■□□□□ 0.2
LTA-215ENST00000471842 AKAP11Q9UKA4 1901 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 LDHBP07195 334 aaKnown RBP16.29■□□□□ 0.2
LTA-215ENST00000471842 PRDX5P30044 214 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 HDLBPQ00341 1268 aaKnown RBP16.29■□□□□ 0.2
LTA-215ENST00000471842 GORABQ5T7V8 394 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 WNK4Q96J92 1243 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 ZDHHC15Q96MV8 337 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 C1orf115Q9H7X2 142 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 ZBED9Q6R2W3 1325 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 A0A1B0GUL7 405 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
LTA-215ENST00000471842 TIMM10P62072 90 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 OS9Q13438 667 aaPredicted RBP16.29■□□□□ 0.2
LTA-215ENST00000471842 CCDC102BQ68D86 513 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 DENND2AQ9ULE3 1009 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 SUGT1Q9Y2Z0 365 aa16.29■□□□□ 0.2
LTA-215ENST00000471842 CASP8AP2Q9UKL3 1982 aa16.28■□□□□ 0.2
LTA-215ENST00000471842 PNMA6EA0A0J9YXQ4 647 aa16.28■□□□□ 0.2
LTA-215ENST00000471842 G3BP1Q13283 466 aaKnown RBP eCLIP16.28■□□□□ 0.2
LTA-215ENST00000471842 MAP3K11Q16584 847 aa16.28■□□□□ 0.2
LTA-215ENST00000471842 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
LTA-215ENST00000471842 ABCF2Q9UG63 623 aa16.28■□□□□ 0.2
LTA-215ENST00000471842 AKAP2Q9Y2D5 859 aa16.28■□□□□ 0.2
LTA-215ENST00000471842 MTX1Q13505 466 aa16.27■□□□□ 0.19
LTA-215ENST00000471842 APOBEC3HQ6NTF7 200 aaKnown RBP16.27■□□□□ 0.19
LTA-215ENST00000471842 DZIP1Q86YF9 867 aaKnown RBP16.27■□□□□ 0.19
LTA-215ENST00000471842 XAGE2Q96GT9 111 aa16.27■□□□□ 0.19
LTA-215ENST00000471842 TEPSINQ96N21 525 aa16.27■□□□□ 0.19
LTA-215ENST00000471842 DAGLAQ9Y4D2 1042 aa16.27■□□□□ 0.19
LTA-215ENST00000471842 MANSC4A6NHS7 340 aaPredicted RBP16.26■□□□□ 0.19
LTA-215ENST00000471842 SEMA3EO15041 775 aa16.26■□□□□ 0.19
LTA-215ENST00000471842 ZBTB48P10074 688 aaPredicted RBP16.26■□□□□ 0.19
LTA-215ENST00000471842 TM4SF4P48230 202 aa16.26■□□□□ 0.19
LTA-215ENST00000471842 TCP10Q12799 353 aa16.26■□□□□ 0.19
LTA-215ENST00000471842 RASGRF1Q13972 1273 aa16.26■□□□□ 0.19
LTA-215ENST00000471842 MVPQ14764 893 aaKnown RBP16.26■□□□□ 0.19
LTA-215ENST00000471842 HHIPL2Q6UWX4 724 aa16.26■□□□□ 0.19
LTA-215ENST00000471842 CSADQ9Y600 493 aa16.26■□□□□ 0.19
LTA-215ENST00000471842 ZGPATQ8N5A5 531 aaKnown RBP16.25■□□□□ 0.19
LTA-215ENST00000471842 ZNF296Q8WUU4 475 aaPredicted RBP16.25■□□□□ 0.19
LTA-215ENST00000471842 OPTNQ96CV9 577 aa16.25■□□□□ 0.19
LTA-215ENST00000471842 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.25■□□□□ 0.19
LTA-215ENST00000471842 OTOFQ9HC10 1997 aa16.25■□□□□ 0.19
LTA-215ENST00000471842 VGLL4Q14135 290 aa16.24■□□□□ 0.19
LTA-215ENST00000471842 CNKSR2Q8WXI2 1034 aa16.24■□□□□ 0.19
LTA-215ENST00000471842 OTUD5Q96G74 571 aa16.24■□□□□ 0.19
LTA-215ENST00000471842 WRNIP1Q96S55 665 aa16.24■□□□□ 0.19
LTA-215ENST00000471842 USP40Q9NVE5 1235 aa16.24■□□□□ 0.19
LTA-215ENST00000471842 RLBP1P12271 317 aa16.23■□□□□ 0.19
LTA-215ENST00000471842 GJA5P36382 358 aa16.23■□□□□ 0.19
LTA-215ENST00000471842 CDC42EP5Q6NZY7 148 aa16.23■□□□□ 0.19
LTA-215ENST00000471842 MIGA2Q7L4E1 593 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms